EBG00000313339 - n.2596A>G
Drug resistance types
4 Sensitive
19 RR-TB
6 HR-TB
39 MDR-TB
16 Pre-XDR-TB
0 XDR-TB
102 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 12 |
| lineage4.3.3 | 7 |
| lineage4.3.4.2 | 5 |
| lineage4.1.1.1 | 3 |
| lineage4.1.2.1 | 11 |
| lineage4.2.1 | 4 |
| lineage2.2;lineage4 | 1 |
| lineage4.2.2.2 | 5 |
| lineage4.1.3 | 1 |
| lineage2.2.1 | 47 |
| lineage4.9 | 35 |
| lineage4.4.2 | 5 |
| lineage4.4.1.1 | 7 |
| lineage4.5 | 1 |
| lineage3 | 5 |
| lineage2.2.1.1 | 3 |
| lineage2.2.2 | 6 |
| lineage4.1.1.3 | 3 |
| lineage4.6.5 | 1 |
| lineage4.3 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.8.1 | 1 |
| lineage3.1.3 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage6.1.2 | 1 |
| lineage4.2.2 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 186 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796599 | Other | lineage4.8 | None | ERR2984782 | Pre-XDR-TB | lineage4.3.3 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR16058249 | Sensitive | lineage4.2.2.2 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR5818386 | Other | lineage4.9 | None | SRR18002956 | Other | lineage2.2.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675582 | Other | lineage4.9 | None | SRR7131237 | Other | lineage2.2.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR867555 | Other | lineage3 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR10796560 | Other | lineage4.9 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR7069946 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR10796593 | Other | lineage4.3 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR19304115 | Other | lineage4.1.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR19303899 | Other | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR5818470 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR2027291 | Sensitive | lineage3.1.3 | None | SRR7131123 | Other | lineage4.8 | None | SRR7131147 | Other | lineage4.1.2.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR7131229 | Other | lineage4.1.2.1 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR1238559 | Other | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16370436 | MDR-TB | lineage4.4.2 | None | SRR18002976 | Other | lineage2.2.1 | None | ERR10796571 | Other | lineage4.9 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002937 | Other | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR19304094 | Other | lineage6.1.2 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR7068971 | Sensitive | lineage3 | None | SRR19303949 | Other | lineage4.3.3 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR10796591 | Other | lineage4.9 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR5818432 | MDR-TB | lineage4.9 | None | SRR7131032 | Other | lineage2.2.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR11342646 | HR-TB | lineage3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR5818411 | RR-TB | lineage4.9 | None | SRR5818448 | Other | lineage4.9 | None | SRR7131121 | Other | lineage4.3.3 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR10796577 | Other | lineage4.9 | None | SRR19303907 | Other | lineage4.8 | None | SRR19303815 | Other | lineage4.8 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | ERR2600422 | MDR-TB | lineage2.2.1 | None | SRR1173719 | Other | lineage4.9 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR5818458 | Other | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR5818385 | Other | lineage4.9 | None | SRR7131145 | Other | lineage4.1.2.1 | None | ERR10796589 | Other | lineage4.9 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR7070154 | Other | lineage4.4.1.1 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR18002906 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | ERR867571 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR5818397 | Other | lineage4.9 | None | ERR7911147 | MDR-TB | lineage4.4.2 | vn | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10796635 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR19303819 | Other | lineage4.6.2.2 | None | SRR3675265 | Other | lineage4 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR7131161 | Other | lineage4.8 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR7069082 | Other | lineage4.1.2.1 | None | SRR7131196 | Other | lineage4.8 | None | SRR5818423 | RR-TB | lineage4.9 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR19304104 | Other | lineage4.8 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | ERR10796592 | Other | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR19303917 | Sensitive | lineage2.2.1 | None | SRR7131182 | Other | lineage4.1.2.1 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818391 | Other | lineage4.9 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818460 | Other | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR5818398 | Other | lineage4.9 | None | SRR13180301 | HR-TB | lineage3 | None | SRR18002948 | Other | lineage2.2.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR3675509 | Other | lineage4.9 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR19303818 | Other | lineage4.3.4.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | ERR10796598 | Other | lineage4.9 | None | ERR10796553 | Other | lineage4.9 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR9971029 | MDR-TB | lineage2.2.2 | None | ERR2027230 | Other | lineage4.2.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR19304035 | Other | lineage4.1.2.1 | None | SRR5818414 | Other | lineage4.9 | None | SRR7070134 | Other | lineage3.1.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR22048550 | Other | lineage1.1.3.1 | None | SRR5818422 | Other | lineage4.9 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR5818462 | Other | lineage4.9 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None |
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