Rv0668 - c.159G>C
Drug resistance types
37 Sensitive
61 RR-TB
16 HR-TB
44 MDR-TB
23 Pre-XDR-TB
0 XDR-TB
67 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 17 |
| lineage4.9 | 69 |
| lineage4.1.2 | 1 |
| lineage2.2.1 | 32 |
| lineage5.1.1 | 1 |
| La1.8.1 | 3 |
| lineage4.1.1.3 | 2 |
| lineage4.3.3 | 6 |
| lineage4.3.2.1 | 3 |
| lineage4.8 | 11 |
| lineage4.7 | 1 |
| lineage4.1.2.1 | 10 |
| lineage4.2.1 | 6 |
| lineage4.8.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.3.4.2.1 | 6 |
| lineage4 | 8 |
| lineage4.4.1.2 | 1 |
| La1.3 | 6 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 2 |
| lineage1.1.2 | 1 |
| lineage2.2.2 | 4 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| La1.6 | 1 |
| 9 | |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 3 |
| lineage2 | 1 |
| lineage3.1.1 | 2 |
| lineage4.2.2.1 | 1 |
| La1.4 | 1 |
| lineage4.4 | 1 |
| lineage4.4.1.1 | 3 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage3.1.3 | 1 |
| La1.7.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.2.2 | 1 |
| lineage3.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage3.1 | 1 |
| lineage5 | 1 |
| lineage4;lineage2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage6 | 1 |
| lineage1 | 1 |
| lineage4.1.1.3.1 | 3 |
| lineage4.8.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.1.3.1 | 2 |
| La3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 248 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046376 | Other | lineage3 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7585400 | MDR-TB | lineage3 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755657 | Other | lineage4.8 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3468613 | RR-TB | La1.8.1 | None | ERR3283053 | Other | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4769408 | Other | La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769436 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4800222 | Sensitive | lineage1.1.2 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR9786705 | Sensitive | lineage4.1.2.1 | None | ERR9992784 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049672 | Other | lineage3 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1172717 | Other | lineage4.9 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1173740 | Other | None | SRR1173719 | HR-TB | lineage3 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR16149129 | MDR-TB | lineage4.2.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR16156832 | RR-TB | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR21469201 | Other | La1.7.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR4815310 | Other | None | ERR4815158 | Sensitive | lineage4.9 | None | ERR4815225 | RR-TB | lineage1.2.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424851 | MDR-TB | lineage4.3.3 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR4814709 | Other | lineage4.1.1 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4815550 | Other | lineage4 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4816982 | Other | lineage4 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4816322 | Other | lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | ERR2229233 | Sensitive | lineage4 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816756 | RR-TB | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR2229442 | HR-TB | lineage4.8 | None | ERR4816852 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818149 | Other | lineage4.9 | None | ERR4819041 | Sensitive | lineage4.3.3 | gb | ERR2509886 | RR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4820284 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820324 | Other | lineage4 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819876 | HR-TB | lineage4.3.4.2.1 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4820107 | RR-TB | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4822104 | RR-TB | lineage3 | None | ERR1023509 | Other | None | ERR4820833 | HR-TB | None | ERR4820030 | Other | lineage4.9 | None | ERR4820192 | Other | La3 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None |
|---|
