lineage | Count |
---|---|
lineage4.1.1.3 | 1 |
La1.8.1 | 2 |
lineage4.9 | 12 |
lineage4.4.1.1 | 1 |
lineage2.2.1 | 5 |
lineage4.1.2.1;lineage4.4.1.1 | 1 |
lineage4.8.1 | 2 |
lineage4.1.1.3.1;lineage4.9 | 1 |
lineage4.8 | 5 |
lineage1.2.2 | 1 |
lineage4.2.2.2 | 2 |
lineage4.1.2.1 | 2 |
lineage4.4.1.1.1 | 2 |
lineage3 | 3 |
lineage3.1.1 | 1 |
lineage4.3.3 | 3 |
lineage4.1.1.1 | 2 |
lineage2.2;lineage4.9 | 1 |
lineage4.1.2.1;lineage4.9 | 1 |
lineage2.2.2 | 1 |
lineage4.1.2.1;lineage4.4.1 | 1 |
lineage2.2.1;lineage4.9 | 1 |
lineage2.2;lineage4 | 1 |
lineage4.1.2 | 1 |
lineage4.3.4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 54 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR11342647 | MDR-TB | lineage4.1.1.3 | None |
SRR1792022 | Other | La1.8.1 | None |
ERR3283006 | RR-TB | lineage4.9 | None |
ERR4818851 | RR-TB | lineage4.4.1.1 | None |
ERR5917985 | MDR-TB | lineage2.2.1 | None |
SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None |
SRR11342662 | MDR-TB | lineage4.8.1 | None |
SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None |
ERR978765 | RR-TB | lineage4.8 | None |
ERR502474 | RR-TB | lineage4.9 | None |
ERR108125 | RR-TB | lineage4.9 | None |
ERR4818126 | Other | lineage1.2.2 | None |
SRR7645901 | MDR-TB | lineage2.2.1 | None |
ERR502473 | RR-TB | lineage4.9 | None |
SRR5818586 | RR-TB | lineage4.2.2.2 | None |
ERR3276170 | Other | lineage4.1.2.1 | nl |
ERR4769493 | Other | lineage4.9 | None |
SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None |
SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None |
ERR4819383 | RR-TB | lineage4.9 | None |
ERR502470 | RR-TB | lineage4.9 | None |
SRR5341365 | Pre-XDR-TB | lineage3 | None |
SRR11342693 | MDR-TB | lineage4.8.1 | None |
SRR1173310 | Other | lineage3.1.1 | None |
SRR1140736 | Other | lineage4.1.2.1 | None |
SRR7645906 | Other | lineage2.2.1 | None |
SRR1049673 | Pre-XDR-TB | lineage3 | None |
SRR11342649 | MDR-TB | lineage4.3.3 | None |
ERR502481 | RR-TB | lineage4.9 | None |
SAMEA3501073 | RR-TB | lineage4.8 | None |
SRR11342687 | RR-TB | lineage4.2.2.2 | None |
SRR11342642 | MDR-TB | lineage4.1.1.1 | None |
ERR4815550 | Other | lineage2.2;lineage4.9 | None |
SRR11342651 | MDR-TB | lineage4.1.1.1 | None |
SRR11342660 | MDR-TB | lineage2.2.1 | None |
ERR502479 | RR-TB | lineage4.9 | None |
ERR502478 | RR-TB | lineage4.9 | None |
SRR11342653 | MDR-TB | lineage2.2.1 | None |
ERR4796351 | Sensitive | lineage4.9 | None |
ERR978767 | RR-TB | lineage4.8 | None |
ERR978766 | RR-TB | lineage4.8 | None |
ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None |
SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None |
ERR9992879 | XDR-TB | lineage4.3.3 | None |
SRR1062918 | Other | lineage3 | None |
SRR11342664 | MDR-TB | lineage2.2.2 | None |
SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None |
ERR4815310 | Other | lineage2.2.1;lineage4.9 | None |
SRR16156832 | RR-TB | lineage2.2;lineage4 | None |
SRR11342682 | Other | lineage4.1.2 | None |
SRR11342636 | MDR-TB | lineage4.3.3 | None |
SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None |
ERR3797062 | RR-TB | lineage4.9 | None |
SRR7236330 | Other | La1.8.1 | None |