lineage | Count |
---|---|
lineage4.9 | 30 |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage2.2.1 | 6 |
lineage3 | 3 |
lineage1.1.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.3.3 | 3 |
lineage4.2.2.2 | 1 |
lineage2.2;lineage4.9 | 1 |
lineage4.1.2 | 1 |
lineage4.4.1.1.1 | 2 |
lineage2.2 | 2 |
La1.7;lineage4.9 | 1 |
lineage4.8.1 | 2 |
lineage2.2.1;lineage4.9 | 1 |
lineage4 | 1 |
lineage4.8 | 1 |
lineage2.1;lineage4.9 | 1 |
lineage4.1.1.1 | 2 |
lineage4.8.2;lineage4.9 | 1 |
lineage1.1.3.1 | 1 |
lineage2;lineage4 | 1 |
lineage2.2.1.1 | 1 |
lineage4.2.1 | 1 |
lineage4.9;lineage7 | 3 |
La1.7.1 | 1 |
lineage4.4 | 1 |
La1.7;lineage3.1;lineage4 | 1 |
lineage4.3.4.2.1 | 2 |
lineage4.4.1.2 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 76 |
ID | Drug resistance | Lineage | Country iso2 | ERR473334 | HR-TB | lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | ERR4819314 | Other | lineage1.1.1 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR6044780 | Sensitive | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR2446509 | Other | lineage3 | nl | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR3675280 | RR-TB | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR323037 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None |
---|