lineage | Count |
---|---|
lineage1.2.2 | 1 |
lineage4.1.2.1 | 2 |
lineage4.9 | 14 |
lineage4 | 3 |
4 | |
lineage2.2.1 | 2 |
lineage4.8 | 2 |
lineage4.4.1.1 | 2 |
lineage4.1 | 1 |
lineage4.1.1.3.1 | 1 |
lineage4.8.2 | 1 |
lineage4.3.3 | 1 |
lineage3.1.1 | 1 |
lineage4.2.1 | 2 |
La1.2 | 1 |
lineage4.7 | 1 |
lineage4.8;lineage4.3.3 | 1 |
lineage4.4 | 1 |
spoligotype | Count |
---|---|
None | 41 |
ID | Drug resistance | Lineage | Country iso2 | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4815572 | Other | lineage4.1.2.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | ERR4815310 | Other | None | ERR4816964 | Other | lineage4.9 | None | ERR4817204 | RR-TB | lineage4.9 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2446566 | Other | lineage4.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4819307 | RR-TB | lineage4 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR6044952 | RR-TB | lineage4.9 | None | ERR4819933 | Other | lineage4.9 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR6046737 | Other | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR7645927 | Other | lineage4.8 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | ERR6359069 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR736839 | Other | None | SRR1173310 | MDR-TB | None | SRR1062928 | RR-TB | lineage4 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1140736 | RR-TB | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR16627752 | RR-TB | lineage4.4 | None |
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