EBG00000313339 - n.2473G>A
Drug resistance types
5 Sensitive
46 RR-TB
8 HR-TB
35 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
107 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.7 | 2 |
| lineage4.9 | 31 |
| lineage2.2.1 | 28 |
| lineage4.8 | 49 |
| lineage4.4.1.2 | 2 |
| La1.6 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.2.2 | 4 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.3 | 8 |
| lineage4 | 1 |
| lineage4.3.4.2.1 | 7 |
| lineage4.6.5 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.1.2 | 3 |
| lineage4.1.1.1 | 3 |
| lineage4.1.2.1 | 9 |
| lineage4.3 | 1 |
| lineage4.3.4.1 | 2 |
| La2 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 4 |
| La1.8.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage3 | 7 |
| lineage4.1.3 | 1 |
| lineage4.3.4.2 | 3 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.4.2 | 2 |
| lineage1.2.2.2 | 2 |
| lineage4.3.2 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage1.1.3.2 | 1 |
| lineage4.2.1 | 6 |
| lineage2.2.1.1 | 2 |
| lineage4.8.1 | 2 |
| lineage4.3.2.1 | 2 |
| lineage6.2.3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 214 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7645928 | Other | lineage4.7 | None | ERR10796560 | Other | lineage4.9 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR10430377 | MDR-TB | lineage2.2.1 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR10993951 | RR-TB | La1.6 | None | ERR978761 | Other | lineage4.8 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818414 | Other | lineage4.9 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR6046839 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR978752 | Other | lineage4.8 | None | ERR867569 | Other | lineage4.9 | None | ERR10796581 | Other | lineage4.1.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR978693 | Other | lineage4.8 | None | SRR13888750 | Other | La2 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR911930 | Other | lineage4.8 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR10796596 | Other | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR978747 | Other | lineage4.8 | None | ERR3468488 | Other | La1.8.1 | None | ERR2228900 | Other | lineage4.8 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR7131195 | Other | lineage2.2.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | ERR978694 | Other | lineage4.8 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR7069839 | Other | lineage4.8 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | ERR978733 | RR-TB | lineage4.8 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2228910 | Other | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR3675491 | Other | lineage4.7 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR5908124 | Other | lineage4.8 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131147 | Other | lineage4.1.2.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR978762 | Other | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR10315486 | MDR-TB | lineage2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR6982141 | Other | lineage4.3.3 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | ERR978760 | RR-TB | lineage4.8 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675452 | Other | lineage3 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6046376 | Other | lineage3 | None | SRR7131145 | Other | lineage4.1.2.1 | None | ERR11465488 | Sensitive | lineage4.1.2.1 | None | SRR1019127 | Other | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | DRR185024 | Other | lineage2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR978735 | Other | lineage4.8 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR2229147 | Other | lineage4.8 | None | ERR867571 | Other | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR978754 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR19303907 | Other | lineage4.8 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | ERR10796630 | Other | lineage6.2.3 | None | ERR978755 | RR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR10851730 | Other | lineage4.3.3 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645977 | MDR-TB | lineage4.2.1 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR978756 | Other | lineage4.8 | None | SRR6982239 | Sensitive | lineage4.1.1.3 | None | SRR7131229 | Other | lineage4.1.2.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | SRR10303325 | MDR-TB | lineage2.2.1 | None | ERR867574 | Other | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR5818386 | Other | lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820030 | Other | lineage4.9 | None | ERR11465301 | Other | lineage4.3.4.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR2229366 | Other | lineage4.8 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | ERR911929 | Other | lineage4.8 | None | SRR5818398 | Other | lineage4.9 | None | SRR18003032 | Other | lineage2.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR10796577 | Other | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR10796625 | Other | lineage4.4.1.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR11342646 | HR-TB | lineage3 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR978727 | Other | lineage4.8 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR1140716 | Other | lineage3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None |
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