Rv1630 - c.918G>C
Drug resistance types
9 Sensitive
12 RR-TB
12 HR-TB
12 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 5 |
| lineage4.9 | 16 |
| lineage4.2.1 | 1 |
| lineage4.8 | 5 |
| lineage4.4.1.1.1 | 3 |
| lineage3.1.1 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.8.1 | 2 |
| lineage3 | 3 |
| lineage4.3.3 | 3 |
| lineage5.1.1 | 1 |
| La1.7;lineage4.9 | 5 |
| lineage4.2.2.2 | 1 |
| La1.7;lineage4.3.4.1 | 1 |
| lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9 | 4 |
| lineage2.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.6.2.2 | 3 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La1.7 | 2 |
| lineage2.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 74 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR400529 | Other | lineage3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR751345 | Other | lineage5.1.1 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR3675552 | Other | lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867575 | Other | lineage4.9 | None | SRR17658565 | Pre-XDR-TB | lineage3 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR11465802 | Other | La1.7;lineage4.3.4.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR22251329 | Other | lineage2.1 | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6046210 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR867567 | RR-TB | lineage3 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675441 | Other | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR3675461 | RR-TB | lineage4.9 | None |
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