lineage | Count |
---|---|
lineage5 | 2 |
lineage4.9 | 17 |
lineage4.1.1.3.1 | 1 |
15 | |
lineage3.1.2.1 | 1 |
lineage3 | 3 |
lineage2.2.1 | 10 |
lineage4.3.2 | 1 |
lineage4.8.2 | 1 |
lineage1.2.2.2 | 1 |
lineage4.3.3 | 1 |
lineage4 | 5 |
lineage3.1.1 | 1 |
lineage1.1.3.1 | 1 |
lineage4.1.2.1 | 2 |
lineage4.2.1 | 1 |
lineage4.7 | 1 |
lineage4.4.1.1;lineage1.2.2.1 | 1 |
lineage4.3.4.1;La1.7 | 1 |
La1.2 | 1 |
lineage4.6.2.2 | 3 |
lineage2.2.2 | 1 |
lineage5.1.1 | 1 |
lineage1.1.1.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.4.1.1.1 | 1 |
lineage1.1.1 | 1 |
lineage4.8 | 2 |
lineage4.1 | 1 |
lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 80 |
ID | Drug resistance | Lineage | Country iso2 | ERR4816967 | RR-TB | lineage5 | None | SRR3675552 | RR-TB | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR212121 | HR-TB | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR2515055 | Other | lineage3 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4820324 | Other | lineage4 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820107 | RR-TB | None | ERR4819910 | Other | lineage4.9 | None | ERR4820833 | HR-TB | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6045519 | HR-TB | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821214 | RR-TB | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821310 | Other | lineage5 | None | ERR2851359 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045267 | RR-TB | lineage4 | None | ERR4830353 | Other | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR7645928 | RR-TB | lineage4.7 | None | ERR027293 | Other | None | ERR3797043 | HR-TB | None | ERR11465714 | Other | lineage4.4.1.1;lineage1.2.2.1 | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR10796591 | MDR-TB | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR400529 | Other | lineage3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR6358991 | HR-TB | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9786705 | Sensitive | lineage4.1.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10272564 | Sensitive | lineage4.4.1.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR1181250 | Other | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR17658565 | Other | lineage3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675488 | HR-TB | None | ERR4815502 | Other | lineage4.1 | None | SRR22251329 | Other | lineage2.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR3675222 | Other | None | ERR4814748 | Other | lineage4.8 | None | SRR3675501 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675510 | Other | None |
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