lineage | Count |
---|---|
lineage4.9 | 15 |
lineage4.6.1.2 | 2 |
lineage2.2.1 | 35 |
lineage4.8 | 9 |
lineage3.1.1 | 2 |
lineage2.2.1;lineage4.3.4.1 | 1 |
lineage2.2.2 | 1 |
lineage4.2.1 | 2 |
lineage5.1.1 | 1 |
lineage4.1.1.1 | 1 |
lineage2.2;lineage4 | 1 |
La2 | 1 |
lineage4.1.1.3 | 2 |
lineage4.3.4.2.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.3.3 | 2 |
lineage4.8.1 | 1 |
lineage3 | 4 |
lineage3;lineage4 | 1 |
lineage4.1.2;lineage4.9 | 1 |
lineage2;lineage4 | 1 |
spoligotype | Count |
---|---|
None | 85 |
ID | Drug resistance | Lineage | Country iso2 | SRR16156188 | Sensitive | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR11044123 | Sensitive | lineage2.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | ERR9285979 | RR-TB | lineage3.1.1 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR6832749 | HR-TB | lineage2.2.1 | None | ERR11082857 | MDR-TB | lineage2.2.1;lineage4.3.4.1 | None | ERR11067617 | HR-TB | lineage2.2.1 | None | SRR16088412 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832052 | HR-TB | lineage2.2.1 | None | ERR13276391 | HR-TB | lineage2.2.1 | None | ERR4817915 | Other | lineage4.9 | None | ERR11049123 | HR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4821143 | Other | lineage4.9 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR4831354 | Sensitive | lineage2.2.1 | de | SRR29356688 | Other | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR11067394 | HR-TB | lineage2.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR867573 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR13285133 | MDR-TB | lineage2.2.1 | None | SRR29539384 | HR-TB | lineage2.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | ERR038289 | Other | lineage4.3.3 | None | SRR6045002 | RR-TB | lineage4.9 | None | ERR4831308 | Other | lineage2.2.1 | de | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR11050298 | HR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4831197 | Sensitive | lineage2.2.1 | de | SRR1181403 | Other | lineage4.9 | None | ERR11043641 | HR-TB | lineage2.2.1 | None | ERR11043526 | MDR-TB | lineage2.2.1 | None | ERR4815079 | RR-TB | lineage3 | None | SRR29356639 | Other | lineage2.2.1 | None | SRR6046839 | Other | lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR6832006 | MDR-TB | lineage2.2.1 | None | ERR5908124 | Other | lineage4.8 | None | SRR24222946 | Other | lineage2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR11083099 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046376 | Other | lineage3 | None | ERR11043477 | HR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR11068856 | HR-TB | lineage2.2.1 | None | ERR9119120 | Other | lineage4.8 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR1181256 | Other | lineage4.9 | None | SRR2100067 | Other | lineage4.3.3 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR1173310 | Other | lineage3.1.1 | None | ERR2677408 | HR-TB | lineage2.2.1 | de | ERR11050928 | HR-TB | lineage2.2.1 | None | ERR11049525 | HR-TB | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1 | None | SRR24222917 | Other | lineage2.2.1 | None | ERR4821276 | Sensitive | lineage3 | None |
---|