EBG00000313339 - n.2711T>C
Drug resistance types
54 Sensitive
24 RR-TB
14 HR-TB
58 MDR-TB
9 Pre-XDR-TB
1 XDR-TB
76 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.1;lineage2.2.1.1 | 3 |
| lineage4.9 | 18 |
| lineage3 | 9 |
| lineage4.6.1;lineage3.1.1 | 1 |
| lineage4.6.1;lineage3.1 | 2 |
| 2 | |
| La2 | 1 |
| lineage4.1.2.1 | 7 |
| lineage2.2.1 | 28 |
| lineage2.2.1.1 | 1 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.8 | 30 |
| lineage4.4.2;lineage4.2.2;lineage2.2.1 | 1 |
| lineage4;lineage2.2.1 | 2 |
| lineage4.5 | 4 |
| lineage2.2.2 | 2 |
| lineage4.1.2 | 2 |
| lineage4.4.1.1 | 17 |
| lineage4.3.3 | 8 |
| lineage4 | 10 |
| lineage4.6.2.2 | 2 |
| lineage4.1 | 1 |
| lineage4.6.1.1 | 5 |
| lineage4.6.1 | 10 |
| lineage4.7 | 4 |
| lineage4.2.1 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.3.4.2 | 3 |
| lineage4.1.1.3 | 2 |
| lineage1.1.3.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| lineage4.3.4.2.1 | 9 |
| La1.8.1 | 17 |
| lineage4.4.1.2 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage3.1.3 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.3 | 1 |
| lineage4.3.4 | 1 |
| La1.8 | 1 |
| lineage4.9;La1.8 | 1 |
| lineage5 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage6.2.1 | 1 |
| lineage5.1.1 | 5 |
| lineage1.2.2.2 | 1 |
| lineage5.1.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 236 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173415 | MDR-TB | lineage4.6.1;lineage2.2.1.1 | None | SRR1172282 | Other | lineage4.9 | None | SRR1173245 | MDR-TB | lineage4.6.1;lineage2.2.1.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173293 | MDR-TB | lineage4.6.1;lineage3.1.1 | None | SRR1173335 | Sensitive | lineage4.9 | None | SRR1173565 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173740 | Other | None | SRR1173832 | MDR-TB | lineage4.6.1;lineage3.1 | None | SRR1173873 | MDR-TB | lineage4.6.1;lineage2.2.1.1 | None | SRR13888750 | Other | La2 | None | SRR13583349 | MDR-TB | lineage4.1.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR15368784 | Sensitive | lineage2.2.1.1 | None | SRR15368751 | Sensitive | lineage2.2.1 | None | SRR15368707 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR15600351 | MDR-TB | lineage4.8 | None | SRR18002877 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002873 | Pre-XDR-TB | lineage4.4.2;lineage4.2.2;lineage2.2.1 | None | SRR18002888 | RR-TB | lineage2.2.1 | None | SRR18002885 | Sensitive | lineage2.2.1 | None | SRR18002911 | Sensitive | lineage4;lineage2.2.1 | None | SRR18002951 | Other | lineage4.5 | None | SRR18002939 | Sensitive | lineage2.2.2 | None | SRR18002950 | MDR-TB | lineage2.2.1 | None | SRR18002971 | Other | lineage2.2.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR18002986 | MDR-TB | lineage2.2.1 | None | SRR18002982 | Sensitive | lineage2.2.1 | None | SRR18002991 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002996 | MDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18003025 | Sensitive | lineage2.2.1 | None | SRR18003026 | Sensitive | lineage2.2.1 | None | SRR18003037 | Sensitive | lineage4.5 | None | SRR18003041 | HR-TB | lineage2.2.1 | None | SRR18003048 | XDR-TB | lineage2.2.1 | None | SRR18511647 | Sensitive | lineage2.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR2100877 | HR-TB | lineage4.1.2 | None | SRR22048338 | Sensitive | lineage4.4.1.1 | None | SRR18572455 | Sensitive | lineage4.9 | None | SRR22528570 | MDR-TB | lineage4.3.3 | None | SRR3086370 | Pre-XDR-TB | lineage4 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR3085299 | Pre-XDR-TB | lineage4 | None | ERR4814340 | Sensitive | lineage4.1.2.1 | gb | SRR8003011 | MDR-TB | lineage4.8 | in | SAMN02381009 | MDR-TB | lineage4.4.1.1 | None | ERR3276175 | Sensitive | lineage4.1 | nl | SAMN02381005 | Other | lineage4.6.1.1 | None | ERR2229540 | Other | lineage4.8 | None | SAMN02381037 | MDR-TB | lineage4.6.1 | None | ERR2446456 | HR-TB | lineage4.4.1.1 | None | ERR2229541 | Other | lineage4.8 | None | ERR3275382 | Sensitive | lineage4.7 | nl | ERR2228965 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4815957 | HR-TB | lineage4.2.1 | None | ERR2229810 | Other | lineage4.8 | None | ERR2229147 | Other | lineage4.8 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | ERR4816734 | Sensitive | lineage4.9 | None | ERR2229366 | Other | lineage4.8 | None | ERR2229690 | Other | lineage4.8 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR2229435 | HR-TB | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR2228813 | Other | lineage4.8 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228890 | Other | lineage4 | None | ERR2228910 | Other | lineage4.8 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | ERR4817977 | Other | lineage4.8 | gb | ERR4818753 | Other | lineage3 | gb | ERR2512423 | Other | lineage4.1.1.3 | None | ERR1199087 | Sensitive | lineage4.6.1.1 | None | ERR4818175 | Sensitive | lineage4.9 | None | ERR2446473 | Sensitive | lineage4.7 | nl | ERR4818583 | Other | lineage4.3.3 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR3276106 | Sensitive | lineage4.4.1.1 | nl | SRR5074294 | Sensitive | lineage4.4.1.1 | None | SRR6280132 | Sensitive | lineage2.2.1 | None | ERR2513738 | Other | lineage1.1.3.1 | None | SRR5074710 | Sensitive | lineage4.3.3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR5074713 | Sensitive | lineage4.4.1.1 | None | SRR5074711 | Sensitive | lineage4.3.3 | None | ERR2514081 | Sensitive | lineage3 | gb | ERR2514801 | Other | lineage1.1.3.2 | gb | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | SAMN02381010 | MDR-TB | lineage4.3.4.2.1 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR1023509 | Other | None | ERR4820046 | Sensitive | lineage4.1.2.1 | None | ERR4821057 | HR-TB | lineage4 | None | SAMN02381012 | MDR-TB | lineage4.4.1.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMN02381047 | Sensitive | lineage4.6.1 | None | ERR4821143 | RR-TB | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR2747617 | Other | La1.8.1 | None | ERR270777 | HR-TB | lineage4.1.2 | None | ERR2747685 | Other | La1.8.1 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4821409 | Other | lineage4.8 | None | ERR4822157 | Sensitive | lineage4;lineage2.2.1 | gb | SRR6046907 | Other | lineage4.9 | None | ERR4828879 | MDR-TB | lineage3 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046888 | MDR-TB | lineage3 | gb | SRR6046376 | Other | lineage3 | None | SRR6397579 | Other | lineage4.4.1.2 | ca | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR5087623 | Other | La1.8.1 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6397917 | Sensitive | lineage4.5 | ca | SRR6785282 | Other | lineage4.3.3 | None | SRR6964650 | Sensitive | lineage3 | None | ERR5087789 | Other | La1.8.1 | None | ERR5311084 | Other | La1.8.1 | None | ERR5311087 | Other | La1.8.1 | None | SRR9971296 | MDR-TB | lineage4.8 | None | SRR9971163 | MDR-TB | lineage4.4.1.1.1 | None | SRR8600288 | Other | La1.8.1 | None | ERR017781 | Other | lineage3 | None | DRR034348 | Other | lineage2.2.1 | None | ERR019855 | Other | lineage3 | None | ERR10796558 | Sensitive | lineage4 | None | ERR023742 | Sensitive | lineage3.1.3 | None | ERR10395964 | MDR-TB | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10796552 | Sensitive | lineage4.3.4.1 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796599 | Other | lineage4 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796615 | Other | lineage4 | None | ERR10796627 | Other | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR3439277 | Sensitive | lineage4.9 | None | ERR3439229 | Other | La1.8.1 | None | ERR3439265 | Other | lineage4.9 | None | ERR3439280 | Other | La1.8 | None | ERR3439279 | Other | lineage4.9;La1.8 | None | ERR3439285 | Sensitive | lineage4.9 | None | ERR3439281 | Sensitive | lineage4.9 | None | ERR3439317 | Sensitive | lineage4.9 | None | ERR3439282 | Sensitive | lineage4.9 | None | ERR3468578 | Other | La1.8.1 | None | ERR3468631 | Other | La1.8.1 | None | ERR3468638 | Other | La1.8.1 | None | ERR3468640 | Other | La1.8.1 | None | ERR3468655 | Other | La1.8.1 | None | ERR3468639 | Other | La1.8.1 | None | ERR4132460 | MDR-TB | lineage2.2.1 | None | ERR3468686 | Other | La1.8.1 | None | ERR4187652 | Other | lineage4.9 | None | ERR4812495 | Other | lineage4.1.2.1 | pe | ERR4457908 | Sensitive | lineage4.1.2.1 | None | ERR4627311 | Other | La1.8.1 | None | ERR4627332 | Other | La1.8.1 | None | ERR4192364 | Sensitive | lineage5 | None | ERR4797501 | Pre-XDR-TB | lineage2.2.1 | in | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR751332 | Sensitive | lineage6.2.1 | None | ERR5865378 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865379 | Pre-XDR-TB | lineage2.2.1 | None | ERR5908124 | Other | lineage4.8 | None | ERR6197027 | Other | lineage4.7 | None | ERR6197037 | MDR-TB | lineage4.3.4.2 | None | ERR751330 | MDR-TB | lineage5.1.1 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197035 | Other | lineage4.7 | None | ERR6197043 | MDR-TB | lineage4.3.4.2 | None | ERR751329 | Sensitive | lineage5.1.1 | None | ERR751336 | Sensitive | lineage5.1.1 | None | ERR751328 | Sensitive | lineage5.1.1 | None | ERR7821187 | Sensitive | lineage1.2.2.2 | None | ERR751339 | Sensitive | lineage5.1.2 | None | ERR751338 | Other | lineage5.1.1 | None | SRR10272561 | Sensitive | lineage4.4.1.1 | None | ERR9119120 | Other | lineage4.8 | None | SRR023450 | RR-TB | lineage2.2.1 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR10214507 | Other | lineage1.2.1.2.1 | None | SRR10315641 | MDR-TB | lineage4.4.1.1.1 | None | SRR10272566 | Other | lineage4.3.3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049622 | MDR-TB | lineage4.4.1.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049625 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049623 | MDR-TB | lineage4.4.1.1 | None | SRR1049629 | MDR-TB | lineage4.4.1.1 | None | SRR1049723 | MDR-TB | lineage4.6.1 | None | SRR1049624 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049630 | MDR-TB | lineage4.4.1.1 | None | SRR1049724 | MDR-TB | lineage4.6.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049744 | Sensitive | lineage4.6.1 | None | SRR1049743 | Sensitive | lineage4.6.1 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | SRR1062902 | MDR-TB | lineage4.4.1.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062897 | MDR-TB | lineage4.4.1.1 | None | SRR1062925 | Sensitive | lineage4.6.1.1 | None | SRR1062898 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062895 | Other | lineage4.6.1.1 | None | SRR1062933 | Sensitive | lineage4.9 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1062927 | MDR-TB | lineage4.6.1 | None | SRR1062937 | HR-TB | lineage4.6.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1062941 | MDR-TB | lineage4.6.1.2 | None | SRR11342635 | MDR-TB | lineage4.8 | None | SRR1140627 | Other | lineage4.6.1 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | SRR1140586 | HR-TB | lineage4.9 | None | SRR1140723 | Sensitive | lineage4.6.1.1 | None | SRR1140677 | MDR-TB | lineage4.6.1 | None | SRR1140729 | MDR-TB | lineage4.4.1.1 | None | SRR1140750 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140751 | MDR-TB | lineage4.4.1.1 | None | SRR1140740 | RR-TB | lineage4.6.1.2 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None |
|---|
