Rv0667 - c.1386C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
6 Sensitive
19 RR-TB
26 HR-TB
13 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2.2 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage2.2.1 | 4 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.9 | 37 |
| La2;lineage4.9;lineage9 | 1 |
| lineage3 | 2 |
| lineage2.2.1.1 | 3 |
| lineage4.2;lineage4.9 | 3 |
| 3 | |
| lineage4.3.2;lineage4.9 | 1 |
| La3;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.3.3 | 1 |
| La1.7;lineage4.9 | 5 |
| La2;lineage4.9 | 1 |
| lineage4.6.5 | 1 |
| lineage4.8 | 4 |
| lineage4.2.1 | 1 |
| lineage6.1.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage3.1.2.1 | 1 |
| La1;lineage4.9 | 1 |
| lineage3.1.1 | 1 |
| lineage4 | 1 |
| lineage4.9;lineage6.3 | 1 |
| La1.7 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 89 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR17832802 | HR-TB | lineage3 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | SRR1184329 | Other | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1196478 | Other | lineage4.9 | None | SRR3675312 | Sensitive | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR4817069 | RR-TB | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR13861149 | RR-TB | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR1173633 | Other | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR4798823 | HR-TB | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR26159063 | RR-TB | lineage4.9 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR13861284 | RR-TB | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | ERR4816478 | HR-TB | lineage4 | None | ERR4816656 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | ERR4816151 | Sensitive | lineage4.8 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR987722 | MDR-TB | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR29096410 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None |
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