lineage | Count |
---|---|
lineage4 | 6 |
23 | |
lineage4.8 | 6 |
lineage3 | 5 |
lineage3.1 | 1 |
lineage4.5 | 1 |
lineage4.9 | 128 |
lineage1.1.1 | 1 |
lineage4.2.1 | 1 |
lineage2.2.1 | 6 |
lineage2.2.1.1 | 3 |
La2 | 1 |
La1.8.1 | 2 |
lineage6.1.1 | 2 |
lineage3.1.2 | 1 |
lineage4.6.5 | 2 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage4.4.1.1 | 1 |
lineage4.3.3 | 1 |
lineage4.1.2.1 | 2 |
lineage3.1.1 | 1 |
spoligotype | Count |
---|---|
None | 195 |
ID | Drug resistance | Lineage | Country iso2 | ERR4814639 | HR-TB | lineage4 | None | SRR3675501 | HR-TB | None | SRR3675222 | Other | None | ERR176740 | HR-TB | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR3675312 | HR-TB | lineage4 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4816470 | Other | lineage3 | None | SRR3675510 | Other | None | ERR4817069 | RR-TB | None | ERR4816151 | Other | lineage4.8 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816756 | RR-TB | None | SRR3675571 | HR-TB | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816466 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR4818929 | HR-TB | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4819623 | Sensitive | lineage4.9 | None | ERR4830353 | Other | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5341470 | HR-TB | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046492 | Other | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR294266 | HR-TB | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR323039 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR4188222 | MDR-TB | La1.8.1 | None | ERR323053 | HR-TB | None | ERR1034652 | Other | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769553 | RR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR987722 | HR-TB | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR736837 | Other | lineage4.9 | None | ERR736865 | HR-TB | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR1173185 | HR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1140736 | RR-TB | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1175473 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173765 | Other | lineage4.1.2.1 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR12634609 | MDR-TB | lineage3.1.1 | None | SRR13861138 | RR-TB | lineage4.9 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR13861140 | MDR-TB | lineage4.9 | None | SRR13861154 | RR-TB | lineage4.9 | None | SRR13861197 | RR-TB | lineage4.9 | None | SRR13861170 | RR-TB | lineage4.9 | None | SRR13861182 | RR-TB | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861169 | RR-TB | lineage4.9 | None | SRR13861178 | RR-TB | lineage4.9 | None | SRR13861202 | RR-TB | lineage4.9 | None | SRR13861199 | RR-TB | lineage4.9 | None | SRR13861196 | RR-TB | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861222 | RR-TB | lineage4.9 | None | SRR13861236 | RR-TB | lineage4.9 | None | SRR13861233 | RR-TB | lineage4.9 | None | SRR13861232 | RR-TB | lineage4.9 | None | SRR13861277 | RR-TB | lineage4.9 | None | SRR13861245 | RR-TB | lineage4.9 | None | SRR13861274 | RR-TB | lineage4.9 | None | SRR13861262 | RR-TB | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | SRR13861283 | Other | lineage4.9 | None | SRR13861282 | RR-TB | lineage4.9 | None | SRR13861292 | RR-TB | lineage4.9 | None | SRR13861320 | RR-TB | lineage4.9 | None | SRR13861299 | RR-TB | lineage4.9 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861310 | RR-TB | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861337 | RR-TB | lineage4.9 | None | SRR13861344 | RR-TB | lineage4.9 | None | SRR13861346 | RR-TB | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861378 | RR-TB | lineage4.9 | None | SRR13861355 | RR-TB | lineage4.9 | None | SRR13861357 | RR-TB | lineage4.9 | None | SRR13861366 | RR-TB | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861410 | MDR-TB | lineage4.9 | None | SRR13861406 | MDR-TB | lineage4.9 | None | SRR13861408 | MDR-TB | lineage4.9 | None | SRR13861437 | RR-TB | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861440 | RR-TB | lineage4.9 | None | SRR13861443 | RR-TB | lineage4.9 | None | SRR13861465 | RR-TB | lineage4.9 | None | SRR13861446 | RR-TB | lineage4.9 | None | SRR13861451 | RR-TB | lineage4.9 | None | SRR13861454 | RR-TB | lineage4.9 | None | SRR13861458 | MDR-TB | lineage4.9 | None | SRR13861450 | RR-TB | lineage4.9 | None | SRR13861475 | RR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861481 | RR-TB | lineage4.9 | None | SRR13861491 | RR-TB | lineage4.9 | None | SRR13861488 | RR-TB | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861495 | MDR-TB | lineage4.9 | None | SRR13861498 | RR-TB | lineage4.9 | None | SRR13861508 | RR-TB | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | SRR13861517 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861513 | RR-TB | lineage4.9 | None | SRR13861520 | RR-TB | lineage4.9 | None | SRR13861561 | RR-TB | lineage4.9 | None | SRR13861524 | RR-TB | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13861563 | RR-TB | lineage4.9 | None | SRR13861530 | RR-TB | lineage4.9 | None | SRR13861542 | RR-TB | lineage4.9 | None | SRR13861543 | RR-TB | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861560 | RR-TB | lineage4.9 | None | SRR13861603 | RR-TB | lineage4.9 | None | SRR13861589 | RR-TB | lineage4.9 | None | SRR13861588 | RR-TB | lineage4.9 | None | SRR13861565 | RR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861585 | RR-TB | lineage4.9 | None | SRR13861590 | RR-TB | lineage4.9 | None | SRR13861599 | RR-TB | lineage4.9 | None | SRR13861632 | MDR-TB | lineage4.9 | None | SRR13861618 | RR-TB | lineage4.9 | None | SRR13861631 | RR-TB | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861678 | RR-TB | lineage4.9 | None | SRR13861662 | RR-TB | lineage4.9 | None | SRR13861703 | RR-TB | lineage4.9 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR13861695 | RR-TB | lineage4.9 | None | SRR13861701 | RR-TB | lineage4.9 | None | SRR13861722 | RR-TB | lineage4.9 | None | SRR13861713 | RR-TB | lineage4.9 | None | SRR13861724 | RR-TB | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SRR13861737 | RR-TB | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR13861735 | MDR-TB | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR3675488 | HR-TB | None |
---|