EBG00000313339 - n.1842C>T


Drug resistance types
8 Sensitive 29 RR-TB 14 HR-TB 20 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 77 Other
lineage Counts
lineage Count
lineage4.3 1
lineage4.1.1.3 3
lineage4.9 31
lineage1.2.2.2 1
lineage3 16
lineage4.4.1.1 2
lineage4.3.4.2.1 4
lineage4.6.1.2 5
lineage2.2.1 9
lineage4.1.2.1 12
lineage4.4.1.1;lineage4.1.2.1 1
lineage4 7
La1.6 1
lineage4.2.2.2 1
lineage4.3.3 7
5
La2 1
lineage4.8 12
lineage2.2.1.1 2
lineage4.1.1 2
lineage4.4.2 1
lineage4.9;lineage3.1.1 1
lineage4.6.5 1
lineage4.1 1
lineage5 2
lineage1.2.1.1 1
lineage3.1 1
lineage3.1.2.1 1
lineage4.1.2 3
lineage4.3.4.2 1
lineage4.6.2.2 4
lineage4.3.4.1 1
lineage1.1.2 1
lineage3.1.1 4
lineage1.1.3.1 2
lineage4.2.1 1
lineage4.4 1
lineage1.1.3.3 1
lineage4.8;lineage3 1
lineage3.1.2.2 1
lineage4.9;lineage1.1 1
lineage4.3.4 1
spoligotype Counts
spoligotype Count
None 155
Geographic prevalence
Country level data for this variant is available for 10 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9117760 HR-TB lineage4.3 None
ERR3957933 Sensitive lineage4.1.1.3 None
ERR473279 Other lineage4.9 None
ERR4769554 RR-TB lineage4.9 None
ERR9117827 Other lineage1.2.2.2 None
ERR9117788 Other lineage3 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1062928 RR-TB lineage4 None
SRR10993951 RR-TB La1.6 None
SRR11342688 Other lineage4.2.2.2 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1173170 Other lineage4.9 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1184308 Sensitive lineage4.9 None
SRR1173310 MDR-TB None
SRR1173385 Sensitive lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1173719 HR-TB lineage3 None
SRR1173770 Other lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR16156188 HR-TB lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
SRR13888750 Other La2 None
SRR16156804 RR-TB lineage4.9 None
SRR16156832 RR-TB None
SRR19303820 RR-TB lineage4.8 None
SRR18909918 Other lineage2.2.1.1 None
SRR18665450 Sensitive lineage4.1.1 None
ERR4814763 Other lineage2.2.1 None
ERR4815777 Other lineage4.9 None
SRR22424765 MDR-TB lineage4 None
ERR4815193 MDR-TB lineage4.8 None
ERR4815301 Other lineage4.4.2 None
ERR4814709 Other lineage4.1.1 None
ERR171142 Other lineage4.9;lineage3.1.1 None
ERR4819579 HR-TB lineage4.3.3 None
ERR4814745 Other lineage4.6.5 None
SAMEA3501073 RR-TB lineage4.8 None
ERR4815502 Other lineage4.1 None
SRR3675265 Other lineage4 None
ERR4814896 Other lineage2.2.1.1 None
ERR4814911 Other lineage4.3.3 None
ERR2027257 Other lineage4.1.2.1 None
ERR4816967 RR-TB lineage5 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4816417 Other lineage4.9 None
ERR3275298 MDR-TB lineage4.8 nl
ERR2027290 RR-TB lineage3.1 None
ERR4816232 Other lineage4 None
ERR4819011 Other lineage3.1.2.1 None
ERR4816464 Other lineage3 None
ERR4816511 Other lineage3 gb
ERR4816531 Other lineage4.1.2 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4818691 Other lineage4.8 None
ERR4817874 Other lineage3 None
SRR4035772 Sensitive lineage4.1.2 None
ERR4817194 Other lineage4.1.2.1 None
ERR4816782 Other lineage4.1.2.1 None
ERR4816856 Other lineage4.1.2.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4818646 Sensitive lineage4.1.2.1 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4819002 HR-TB lineage4.8 None
ERR4818752 Other lineage3 None
ERR4819073 Other lineage4.1.2.1 None
ERR2512491 Sensitive lineage3 gb
ERR4818570 Other lineage4.3.3 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4818232 Other lineage4.1.2 gb
ERR4820720 Other lineage4.1.2.1 None
ERR4817584 MDR-TB lineage3 None
ERR4820230 Other lineage4.1.2.1 gb
ERR4819191 Other lineage4.6.2.2 None
ERR4819198 Other lineage2.2.1 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4819242 HR-TB lineage4.6.2.2 None
ERR4819324 Other lineage4.8 gb
ERR4819640 RR-TB lineage4.6.2.2 None
ERR4819383 RR-TB lineage4.9 None
ERR4819533 Other lineage1.1.2 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4820324 Other lineage4 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4820484 Other lineage4.8 None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4820151 RR-TB lineage4.8 None
ERR4821791 HR-TB lineage4.1.2.1 None
ERR4821769 Other lineage4.1.2.1 None
ERR4820188 Other lineage3 gb
ERR4821028 Sensitive lineage3.1.1 None
ERR4821811 RR-TB lineage4.9 None
SRR6045485 Other lineage4.9 None
SRR6045464 Other lineage4.1.1.3 None
ERR4821172 RR-TB lineage4.9 None
SRR6046117 RR-TB lineage4.9 None
ERR4821214 RR-TB None
ERR4821962 Other lineage4.1.1.3 gb
ERR4822167 Other lineage4.6.2.2 None
ERR4821286 Other lineage4.8 None
ERR4821310 Other lineage5 None
ERR4821704 MDR-TB lineage4.3.3 None
ERR4821616 Other lineage1.1.3.1 None
ERR4822261 RR-TB lineage2.2.1 None
SRR6044817 Other lineage3 None
ERR4821761 Other lineage3 gb
SRR6045664 Other lineage4.2.1 None
SRR6044787 Other lineage4.4 None
SRR6045944 Other lineage4.1.2.1 None
SRR6046275 Other lineage3.1.1 None
SRR6046020 Other lineage3 None
SRR6045267 RR-TB lineage4 None
SRR6045312 Other lineage1.1.3.3 None
SRR6045957 Other lineage4.9 None
SRR6045053 Other None
SRR6046219 Other lineage4.8;lineage3 gb
SRR6046250 Other lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR4829337 Other lineage4.8 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046442 Other lineage3 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
SRR6832644 Other lineage4.3.3 None
ERR017781 Other lineage3 None
ERR019855 Other lineage3 None
ERR10796571 Other lineage4.9 None
ERR10796589 Other lineage4.9 None
SRR6046766 Other lineage3.1.1 None
SRR6046852 MDR-TB lineage3 None
ERR502470 RR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
SRR7131123 Other lineage4.8 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796564 Other lineage4.3.3 None
ERR10796565 RR-TB lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796633 RR-TB lineage4.3.4 None
ERR108125 Pre-XDR-TB lineage4.9 None