EBG00000313339 - n.1842C>T
Drug resistance types
3 Sensitive
13 RR-TB
3 HR-TB
18 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
13 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 14 |
| lineage2.2.1 | 6 |
| lineage4.4.1.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.6.1.2 | 4 |
| lineage4.4.1.1.1 | 2 |
| lineage4.8 | 5 |
| lineage4.3.3 | 3 |
| lineage4.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.8.1 | 1 |
| lineage4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 51 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR867570 | RR-TB | lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1184308 | RR-TB | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR1173719 | Other | lineage4.9 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342669 | Other | lineage4.8 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4816417 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4821811 | Sensitive | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None |
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