EBG00000313339 - n.524C>A
Drug resistance types
75 Sensitive
15 RR-TB
19 HR-TB
23 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
146 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 141 |
| lineage4.3.3 | 8 |
| lineage2.2.1 | 19 |
| lineage4.1.3 | 1 |
| lineage4.1.2.1 | 14 |
| lineage4.3.2 | 5 |
| lineage3 | 9 |
| lineage3.1.1 | 2 |
| lineage4.4.1.1 | 4 |
| lineage4.9;lineage7 | 1 |
| lineage4.1.1.3 | 1 |
| lineage3;lineage4.9 | 2 |
| lineage4.2.1 | 5 |
| lineage2.2.2 | 3 |
| lineage4.3.4.2 | 4 |
| lineage4.8 | 9 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.1 | 1 |
| lineage4.5 | 1 |
| lineage4.3.4.1 | 6 |
| lineage1.1.3.1 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage3;lineage4 | 2 |
| lineage3.1.2.1 | 3 |
| lineage4.6.1.2 | 2 |
| lineage1.2.2 | 2 |
| lineage5 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.4.2 | 1 |
| lineage4.9.1 | 2 |
| La1.6 | 1 |
| lineage2.2.1.1 | 1 |
| 1 | |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage4.4 | 2 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage3.1 | 1 |
| lineage1.1.3.3 | 1 |
| La1.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.1.1.1 | 2 |
| lineage3.1.2 | 1 |
| lineage4.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1;lineage4.9 | 1 |
| La1.8.1 | 1 |
| lineage4 | 2 |
| lineage4.2.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.7 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 289 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1181496 | Other | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR1182919 | Sensitive | lineage4.9 | None | ERR1213875 | Sensitive | lineage4.3.3 | de | ERR4821334 | Other | lineage4.1.3 | None | ERR4816954 | Other | lineage4.1.2.1 | None | SRR1180807 | Sensitive | lineage4.9 | None | SRR1183050 | Other | lineage4.9 | None | SRR1180555 | Other | lineage4.9 | None | SRR1183396 | Sensitive | lineage4.9 | None | SRR1183720 | Other | lineage4.9 | None | SRR1183359 | Other | lineage4.9 | None | ERR1035316 | MDR-TB | lineage4.3.2 | br | SRR1180668 | Other | lineage4.9 | None | ERR4820188 | Other | lineage3 | gb | SRR1182903 | Sensitive | lineage4.9 | None | SRR1180661 | Sensitive | lineage4.9 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR1183270 | Other | lineage4.9 | None | SRR1183614 | Sensitive | lineage4.9 | None | SRR1180497 | Sensitive | lineage4.9 | None | SRR1182916 | Sensitive | lineage4.9 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR10796578 | Other | lineage2.2.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR1183681 | Other | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4820833 | Other | lineage3;lineage4.9 | None | ERR4821958 | Other | lineage4.3.3 | gb | SRR1183300 | Other | lineage4.9 | None | SRR1180580 | Other | lineage4.9 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181229 | Other | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1183223 | Sensitive | lineage4.9 | None | SRR1181143 | Other | lineage4.9 | None | SRR1183385 | Other | lineage4.9 | None | ERR1035317 | RR-TB | lineage4.3.4.2 | br | ERR3283055 | HR-TB | lineage4.9 | None | ERR4819555 | Other | lineage4.8 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180119 | Other | lineage4.9 | None | SRR1183188 | Other | lineage4.9 | None | SRR1183334 | Other | lineage4.9 | None | SRR1180066 | Sensitive | lineage4.9 | None | SRR1183402 | Other | lineage4.9 | None | SRR1183451 | Sensitive | lineage4.9 | None | SRR1181500 | Sensitive | lineage4.9 | None | SRR1181519 | Sensitive | lineage4.9 | None | SRR1182904 | Sensitive | lineage4.9 | None | ERR4816493 | Other | lineage4.1.2.1 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR1180014 | Sensitive | lineage4.9 | None | SRR1180786 | Sensitive | lineage4.9 | None | SRR1181286 | Other | lineage4.9 | None | SRR1183294 | Sensitive | lineage4.9 | None | SRR1183345 | Sensitive | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR1181590 | Sensitive | lineage4.9 | None | SRR1182901 | Other | lineage4.9 | None | SRR1183259 | Sensitive | lineage4.9 | None | SRR1183476 | Sensitive | lineage4.9 | None | ERR4819765 | Other | lineage4.1 | None | ERR752229 | Other | lineage4.5 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1182971 | Sensitive | lineage4.9 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR4822085 | Other | lineage4.8 | gb | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4819772 | Other | lineage1.1.3.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR4814362 | Other | lineage4.8 | None | ERR4819017 | Other | lineage3 | None | SRR1180752 | Other | lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1181194 | Sensitive | lineage4.9 | None | SRR1181224 | Other | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR7755655 | Other | lineage4.1.2.1 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR7645899 | Other | lineage2.2.1 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR2124083 | HR-TB | lineage4.6.1.2 | None | SRR1183102 | Sensitive | lineage4.9 | None | SRR1183236 | Sensitive | lineage4.9 | None | SRR1183422 | Other | lineage4.9 | None | ERR1035294 | MDR-TB | lineage4.1.2.1 | br | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035297 | MDR-TB | lineage4.3.4.1 | br | SRR1182874 | Sensitive | lineage4.9 | None | SRR1183362 | Other | lineage4.9 | None | SRR1180657 | Other | lineage4.9 | None | ERR4818538 | Sensitive | lineage3 | gb | ERR10796563 | Other | lineage4.3.3 | None | ERR4818126 | Other | lineage1.2.2 | None | ERR4816967 | Other | lineage5 | None | ERR1035293 | MDR-TB | lineage4.3.4.2 | br | ERR4816425 | Other | lineage2.2.2 | None | SRR1183427 | Sensitive | lineage4.9 | None | SRR1182977 | Sensitive | lineage4.9 | None | SRR1181487 | Sensitive | lineage4.9 | None | SRR1180587 | Sensitive | lineage4.9 | None | ERR4815909 | Other | lineage4.8 | None | SRR1182976 | Other | lineage4.9 | None | ERR1213900 | RR-TB | lineage4.1.2.1 | pe | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR1035312 | Pre-XDR-TB | lineage4.3.3 | br | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR1181184 | Sensitive | lineage4.9 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | SRR1181232 | Sensitive | lineage4.9 | None | SRR1183495 | Other | lineage4.9 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR1182982 | Other | lineage4.9 | None | SRR1180095 | Other | lineage4.9 | None | ERR4818691 | Other | lineage4.8 | None | SRR1183129 | Other | lineage4.9 | None | SRR1180456 | Other | lineage4.9 | None | ERR4816510 | Other | lineage4.1.2.1 | None | SRR6046253 | Sensitive | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | ERR11268038 | Other | La1.6 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1183705 | Other | lineage4.9 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR5341456 | Other | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR1035299 | MDR-TB | lineage4.1.2.1 | br | ERR10796577 | Other | lineage4.9 | None | SRR1181508 | Sensitive | lineage4.9 | None | ERR4817060 | Other | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR1183432 | Other | lineage4.9 | None | SRR1181176 | Other | lineage4.9 | None | SRR1183014 | Sensitive | lineage4.9 | None | SRR1183292 | Sensitive | lineage4.9 | None | ERR4815268 | Sensitive | lineage4.8 | None | SRR7646018 | MDR-TB | lineage4.2.1 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4815118 | Other | lineage2.2.2 | None | SRR1181588 | Sensitive | lineage4.9 | None | SRR1183031 | Other | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1180494 | Sensitive | lineage4.9 | None | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | ERR176718 | Sensitive | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR1183692 | Sensitive | lineage4.9 | None | SRR1180771 | Sensitive | lineage4.9 | None | ERR1213873 | MDR-TB | lineage4.3.4.2.1 | rw | ERR4816310 | HR-TB | lineage4.6.1.2 | None | SRR5341306 | Pre-XDR-TB | lineage4.4 | None | SRR1173719 | Other | lineage4.9 | None | SRR1183504 | Sensitive | lineage4.9 | None | SRR1182958 | Other | lineage4.9 | None | SRR1180114 | Other | lineage4.9 | None | SRR1183672 | Sensitive | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR4815427 | HR-TB | lineage3.1 | gb | ERR4817751 | Other | lineage1.1.3.3 | None | SRR6046117 | Other | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR11466070 | Sensitive | lineage4.3.4.1 | None | ERR867575 | Other | lineage4.9 | None | SRR1183664 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR1183603 | Other | lineage4.9 | None | ERR4820959 | Other | lineage4.1.2.1 | None | SRR1183677 | Sensitive | lineage4.9 | None | SRR1181586 | Sensitive | lineage4.9 | None | SRR1183418 | Other | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR1181190 | Sensitive | lineage4.9 | None | SRR1183452 | Other | lineage4.9 | None | SRR1183517 | Other | lineage4.9 | None | SRR1183688 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1183061 | Other | lineage4.9 | None | ERR4814356 | Other | lineage3.1.2 | None | SRR1183020 | Other | lineage4.9 | None | SRR29096276 | Sensitive | lineage4.9 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR1180041 | Sensitive | lineage4.9 | None | ERR4819096 | Other | lineage4.4.1.1 | None | SRR1180815 | Other | lineage4.9 | None | SRR1180128 | Other | lineage4.9 | None | SRR1180646 | Sensitive | lineage4.9 | None | SRR1183442 | Other | lineage4.9 | None | ERR4814714 | Other | lineage3 | None | ERR1213930 | Other | lineage4.3.2 | pe | ERR1035296 | HR-TB | lineage4.9 | br | SRR1183449 | Sensitive | lineage4.9 | None | SRR1181281 | Other | lineage4.9 | None | SRR1183153 | Other | lineage4.9 | None | ERR10796593 | Other | lineage4.3 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR4818988 | Other | lineage1.2.2 | None | SRR1183461 | Other | lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR3797062 | RR-TB | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | ERR4818522 | Other | lineage3 | None | ERR4814748 | Other | lineage4.8 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR1181270 | Sensitive | lineage4.9 | None | SRR1183412 | Other | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | SRR1180101 | Sensitive | lineage4.9 | None | ERR2509886 | Other | lineage3 | None | ERR2515032 | Other | lineage3 | None | ERR1035315 | Pre-XDR-TB | lineage4.3.4.1 | br | SRR1181386 | Other | lineage4.9 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR1034902 | Pre-XDR-TB | lineage4.3.4.2 | pt | ERR4819329 | Sensitive | lineage4.6.2.2 | None | SRR1180530 | Other | lineage4.9 | None | SRR1180154 | Other | lineage4.9 | None | SRR1180729 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR5431730 | Other | La1.8.1 | None | ERR1035301 | MDR-TB | lineage4.3.2 | br | ERR1035300 | HR-TB | lineage4.1.2.1 | br | ERR4814312 | Other | lineage4 | None | ERR4820019 | Other | lineage4.3.4.2.1 | None | SRR1140724 | Other | lineage2.2.1 | None | ERR10796599 | Other | lineage4.8 | None | SRR1173310 | Other | lineage3.1.1 | None | ERR4815811 | Other | lineage4.2.1.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183394 | Other | lineage4.9 | None | SRR1183499 | Other | lineage4.9 | None | ERR1035318 | Pre-XDR-TB | lineage4.3.4.1 | br | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR7645928 | Other | lineage4.7 | None | ERR4820324 | Other | lineage4 | None | ERR4821812 | Sensitive | lineage4.8 | gb | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR1183185 | Other | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR1213874 | MDR-TB | lineage2.2.1 | kr | SRR1181245 | Other | lineage4.9 | None | SRR1180222 | Other | lineage4.9 | None | SRR1183665 | Other | lineage4.9 | None | SRR1180578 | Other | lineage4.9 | None | SRR1180659 | Sensitive | lineage4.9 | None | SRR1183683 | Sensitive | lineage4.9 | None | SRR1183069 | Other | lineage4.9 | None | ERR4819307 | Other | lineage4.3.2 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR11466061 | Sensitive | lineage4.9.1 | None | SRR1181489 | Sensitive | lineage4.9 | None | ERR1035295 | MDR-TB | lineage4.1.2.1 | br | ERR4815709 | Sensitive | lineage4.1.2.1 | None | ERR4815898 | Other | lineage3 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR6046492 | Other | lineage4.9 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR1183417 | Sensitive | lineage4.9 | None | SRR1182963 | Sensitive | lineage4.9 | None | SRR1181573 | Other | lineage4.9 | None | ERR4817134 | HR-TB | lineage2.2.1 | None | SRR1183718 | Sensitive | lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR5341330 | Other | lineage4.9 | None | SRR1180115 | Other | lineage4.9 | None | SRR1180123 | Sensitive | lineage4.9 | None | ERR4819784 | Other | lineage4.1.2.1 | None |
|---|
