EBG00000313339 - n.524C>A


Drug resistance types
24 Sensitive 56 RR-TB 43 HR-TB 31 MDR-TB 19 Pre-XDR-TB 0 XDR-TB 228 Other
lineage Counts
lineage Count
La1.2 2
20
lineage4.1.2.1 43
lineage4.6.1.2 2
lineage2.2.1 36
lineage4.5 3
lineage3.1.1 6
lineage4.4.1.1 13
lineage3 43
lineage4.8 30
lineage4.4.1.1.1 1
lineage4.8.1 1
lineage4.9 24
lineage4.2.1 6
lineage4.4 2
lineage7;lineage2.2.1.2 1
lineage2.2.1.1 3
lineage4.4.1.2 1
lineage4.1.1.3 4
lineage2.2 4
lineage4.3.4.2 8
lineage4.3.2 7
lineage4.3.4.1 10
lineage1.2.2 1
lineage4.4.2 3
lineage4.3.3 16
lineage4.3.4.2.1 3
lineage4 17
lineage4.7 6
lineage3.1.2 1
lineage4.1 4
lineage4.1.2 5
lineage1.1.3.1 4
lineage4.6.5 2
lineage1.1.2 10
lineage1.2.2.2 3
lineage4.2.1.1 2
lineage5 2
lineage1.2.1.1 1
La1.8.2 1
lineage3.1.2.1 2
lineage4.6 3
lineage4.8.2 1
lineage1.1.1 1
lineage1.1.3.3 3
lineage1 2
lineage2.2.2 1
lineage6 2
lineage4.1.1 3
lineage4.1.1.3.1 2
lineage1.2.1.2.1 4
lineage4.6.2.2 6
lineage2.2.1.2 1
lineage4.1.4 2
lineage3.1.3 1
La1.8.1 1
lineage4.3.1.1 2
lineage4.3.2.1 1
lineage1.1.3 1
lineage4.1.3 1
lineage4.1.3;lineage1.1.3.1 1
lineage3.1.2.2 1
lineage2.1 1
La1.6 2
lineage4.2.2.2 1
lineage4.9.1 2
lineage3.1 1
lineage4.3.4 1
spoligotype Counts
spoligotype Count
None 401
Geographic prevalence
Country level data for this variant is available for 29 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4769427 Other La1.2 None
ERR4811493 HR-TB None
ERR4769497 HR-TB La1.2 None
ERR9117695 Other lineage4.1.2.1 None
ERR2124083 HR-TB lineage4.6.1.2 None
ERR176718 Sensitive lineage2.2.1 None
ERR752229 Other lineage4.5 None
ERR8158045 Sensitive lineage2.2.1 None
ERR9117740 Other lineage3.1.1 None
SRR10315464 MDR-TB lineage4.4.1.1 None
ERR9117788 Other lineage3 None
ERR9786639 Sensitive lineage4.8 None
SRR1049674 HR-TB lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR1049675 HR-TB lineage2.2.1 None
SRR11349187 Pre-XDR-TB lineage4.8.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1181250 Other lineage4.9 None
SRR1172075 Pre-XDR-TB lineage3 None
SRR1173719 HR-TB lineage3 None
SRR1181161 Other lineage4.9 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1173310 MDR-TB None
SRR16156832 RR-TB None
SRR16156697 MDR-TB lineage2.2.1 None
SRR1183080 RR-TB lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR14782539 MDR-TB lineage4.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR16627752 RR-TB lineage4.4 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR18002976 Other lineage2.2.1 None
SRR18213726 Other lineage3 None
SRR18213736 MDR-TB lineage3 None
SRR18909918 Other lineage2.2.1.1 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR18911231 Sensitive lineage4.1.1.3 None
ERR4815118 Other lineage2.2 None
SRR8692832 Other lineage4.9 None
SRR22048377 Sensitive lineage4.8 None
ERR1035299 MDR-TB lineage4.1.2.1 br
ERR1035293 MDR-TB lineage4.3.4.2 br
ERR1035296 HR-TB lineage4.9 br
ERR1035301 MDR-TB lineage4.3.2 br
ERR1035297 MDR-TB lineage4.3.4.1 br
ERR1035315 Pre-XDR-TB lineage4.3.4.1 br
ERR1035294 MDR-TB lineage4.1.2.1 br
ERR4815613 Other lineage3 None
ERR1035300 HR-TB lineage4.1.2.1 br
ERR4815225 RR-TB lineage1.2.2 None
ERR4815255 Other lineage4.4.2 None
ERR4815268 Other lineage4.8 None
ERR1035312 Pre-XDR-TB lineage4.3.3 br
ERR4814329 Other lineage4.1.2.1 None
ERR1035317 RR-TB lineage4.3.4.2 br
ERR4814300 HR-TB lineage4.4.1.1 None
ERR4815298 Other lineage4.3.4.2.1 None
ERR4815301 Other lineage4.4.2 None
ERR1035318 Pre-XDR-TB lineage4.3.4.1 br
ERR4814312 Other lineage4 None
ERR1035316 MDR-TB lineage4.3.2 br
ERR4814341 Other lineage4.7 None
ERR4814356 Pre-XDR-TB lineage3.1.2 None
ERR4814362 Other lineage4.8 None
ERR4815698 RR-TB lineage4.7 None
ERR4815777 Other lineage4.9 None
ERR4814472 Other lineage4.1 None
ERR1035295 MDR-TB lineage4.1.2.1 br
ERR4814415 Other lineage3.1.1 None
ERR4814496 RR-TB lineage4.1.2 None
ERR4815709 Sensitive lineage4.1.2.1 None
ERR4814617 Other lineage1.1.3.1 None
ERR4815452 Other lineage4.3.3 None
ERR4815467 Other lineage3 None
ERR4814681 Other lineage2.2.1 None
ERR4814714 Other lineage3 None
SRR3675230 RR-TB lineage3 None
ERR4814748 Other lineage4.8 None
ERR4819579 HR-TB lineage4.3.3 None
ERR4814745 Other lineage4.6.5 None
ERR4814763 Other lineage2.2.1 None
ERR4814896 Other lineage2.2.1.1 None
ERR4814841 Other lineage4.1 None
ERR4814775 Other lineage1.1.2 None
ERR4815499 Other lineage4.3.4.2 None
ERR4815729 Other lineage4.1.2.1 None
ERR4814930 Other lineage4.4.1.1 None
ERR4815534 Other lineage4 None
ERR4814911 Other lineage4.3.3 None
ERR4815792 Other lineage4.1.2.1 None
ERR4814986 Other lineage4.3.4.2 None
ERR4814952 Sensitive lineage3 None
ERR4815079 RR-TB lineage3 None
ERR4816944 RR-TB lineage2.2 None
ERR4816928 HR-TB lineage1.2.2.2 None
ERR4817313 HR-TB lineage4.2.1.1 None
ERR4815919 Other lineage4.8 None
ERR4816954 Other lineage4.1.2.1 None
ERR4817308 Other lineage4.3.4.1 None
ERR4815901 Other lineage2.2 None
ERR4815898 Other lineage3 None
ERR4815910 Other lineage4.1.2.1 None
ERR4815909 Other lineage4.8 None
ERR4815920 Other lineage3 None
ERR4816967 RR-TB lineage5 None
ERR4816015 HR-TB lineage4.4.1.1 None
ERR4817464 Other lineage3.1.1 None
ERR4815956 Other lineage1.1.2 None
ERR4816982 Other lineage4 None
ERR4815944 HR-TB lineage4.1.2.1 None
ERR4816009 Other lineage1.1.2 None
ERR4817060 RR-TB None
SRR3675527 RR-TB lineage4.9 None
ERR4817478 Other lineage3 None
ERR4816270 Other lineage4.1.2.1 None
ERR4816283 Other lineage4.1.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4816133 Other La1.8.2 None
ERR4816183 Other None
ERR4816232 Other lineage4 None
ERR4816243 Sensitive lineage3 None
ERR4816464 Other lineage3 None
ERR4816397 Other lineage1.1.2 None
ERR4816462 Other lineage4.1.2.1 None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR4816429 Other lineage1.1.2 None
ERR4816493 Other lineage4.1.2.1 None
ERR4816476 Other lineage3.1.2.1 None
ERR4816531 Other lineage4.1.2 None
ERR4816510 Other lineage4.1.2.1 None
ERR4817131 Pre-XDR-TB None
ERR4816604 RR-TB lineage4.1.2 None
ERR4817134 HR-TB lineage2.2.1 None
ERR1034902 Pre-XDR-TB lineage4.3.4.2 pt
ERR4816549 Other lineage2.2.1 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4816696 Other lineage3 None
ERR4817189 Other lineage4.7 None
ERR4816627 Other lineage2.2 None
ERR4817175 Other lineage4.8 None
ERR4817435 Other lineage1.1.3.1 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816756 RR-TB None
ERR4816699 Other lineage4.6 None
ERR4817497 Other lineage1.1.2 None
ERR4816831 Other lineage4.1.2.1 None
ERR4816818 Other lineage4.8.2 None
ERR4816883 Other lineage4.5 None
ERR4816833 Other lineage4.1.1.3 None
ERR4816856 Other lineage4.1.2.1 None
ERR4816866 Other lineage2.2.1 None
ERR4817293 Sensitive lineage4.1.2 None
ERR4817780 Other lineage4.7 None
ERR4817452 Other lineage4.8 None
ERR4817703 Other lineage1.1.1 None
ERR4817708 Sensitive lineage4.8 None
ERR4817751 Other lineage1.1.3.3 None
ERR4815811 HR-TB lineage4.2.1.1 None
ERR4817688 Other lineage4.3.4.2 None
ERR4818691 Other lineage4.8 None
ERR4818988 Other lineage1 None
ERR4816425 Other lineage2.2.2 None
ERR4817826 RR-TB lineage4.5 None
ERR4817822 Other lineage4.6 None
ERR4817874 Other lineage3 None
ERR4819002 HR-TB lineage4.8 None
ERR4818714 Other lineage4.8 None
ERR4819007 Other lineage2.2.1 None
ERR4817917 Other lineage2.2.1 None
ERR4818752 Other lineage3 None
ERR2510831 Other lineage4.3.3 None
ERR4819011 Other lineage3.1.2.1 None
ERR4818064 Other lineage4.8 None
ERR4818776 Other lineage2.2.1 None
ERR2446566 Other lineage4.1 None
ERR4818787 MDR-TB lineage6 None
ERR4818785 RR-TB lineage4.1.2.1 None
ERR4818176 Other lineage4.1.2.1 None
ERR4819017 RR-TB lineage3 None
ERR4818810 Other lineage2.2.1 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4818126 RR-TB lineage1 None
ERR4818355 Other lineage3 None
ERR4818173 Other lineage2.2.1 None
ERR4818261 Other lineage1.1.2 None
ERR4818274 Other lineage4 None
ERR4818313 Other lineage2.2.1 None
ERR4818190 Other lineage4.8 None
ERR2513231 RR-TB lineage4.3.4.2 None
ERR4818370 Other lineage4.1.1 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR4818407 Other lineage4.3.2 None
ERR3276170 Other lineage4.1.2.1 nl
ERR2509886 RR-TB lineage3 None
ERR4818536 Other lineage4.9 None
ERR4818565 Other lineage4.8 None
ERR4818393 RR-TB lineage3 None
ERR4818925 Other lineage1.2.1.2.1 None
ERR4818436 Other lineage4.8 None
ERR4818522 Pre-XDR-TB lineage3 None
ERR4818570 Other lineage4.3.3 None
ERR4818977 RR-TB lineage4.1.2.1 None
SRR5007165 MDR-TB lineage3 None
ERR4819087 Other lineage4.3.3 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR4817569 Other lineage4.3.4.1 None
ERR4817584 MDR-TB lineage3 None
ERR4818964 Other lineage1.2.1.2.1 None
ERR4819096 Other lineage4.4.1.1 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR4819140 Other lineage4.1.2.1 None
ERR4819131 Other lineage4 None
ERR4819192 Other lineage3 None
ERR2513681 Other lineage1.1.2 None
ERR4820720 Other lineage4.1.2.1 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4819198 Other lineage2.2.1 None
ERR4819242 HR-TB lineage4.6.2.2 None
ERR4820256 Other lineage2.2.1 None
ERR4819217 Other lineage1.2.2.2 None
ERR4819224 Other lineage1.2.1.2.1 None
ERR4820265 Other lineage4.1.2.1 None
ERR4819307 RR-TB lineage4 None
ERR4819305 RR-TB lineage4.9 None
ERR4819287 Other lineage1.1.3.3 None
ERR2514137 Pre-XDR-TB lineage2.2.1 None
ERR4820324 Other lineage4 None
ERR4819329 Sensitive lineage4.6.2.2 None
ERR4819456 Other lineage4.8 None
ERR4819491 Other lineage4.1.2.1 None
ERR4819462 Other lineage4 None
ERR4820350 Other lineage4.8 None
ERR4819528 RR-TB lineage3 None
ERR2514267 MDR-TB lineage2.2.1.2 None
ERR4820746 RR-TB lineage3 None
ERR4819525 Other lineage3 None
ERR4819553 Other lineage4.1.4 None
ERR4819555 Other lineage4.8 None
ERR4820397 Other lineage4.9 None
ERR4819550 Other lineage3 None
ERR4820748 Other lineage3 None
ERR4819640 RR-TB lineage4.6.2.2 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819597 Other lineage2.2.1.1 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4820769 Other lineage4.8 None
ERR4820777 Other lineage4.1.2.1 None
ERR4820478 Other lineage3.1.3 None
ERR4819706 MDR-TB lineage4.3.4.2 None
SRR5341456 Other None
ERR4819830 Other lineage2.2.1 None
ERR4819765 Other lineage4.1 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR4819784 Other lineage4.1.2.1 None
ERR4819766 Other lineage4.4.1.1 None
ERR4819948 Other lineage4.4.1.1 None
ERR4819872 HR-TB lineage4.4.1.1 None
SRR5341306 Pre-XDR-TB lineage4.4 None
ERR4820817 Other lineage4.1.2.1 None
ERR4820572 Other lineage1.2.1.2.1 None
ERR2514968 Other lineage4.3.3 None
ERR4821011 Other lineage6 None
ERR4820026 Other lineage3 None
ERR2515032 Other lineage3 None
ERR4820075 Other lineage4.1.2.1 None
ERR4820107 RR-TB None
ERR4821791 HR-TB lineage4.1.2.1 None
ERR4820959 Other lineage4.1.2.1 None
ERR4821007 RR-TB lineage1.2.2.2 None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4820833 HR-TB None
SRR5341330 HR-TB None
ERR4820151 RR-TB lineage4.8 None
ERR4820161 Other lineage3 None
ERR4821775 Other lineage4 None
ERR4821796 Other lineage4.1.1 None
SRR6045464 Other lineage4.1.1.3 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR5431730 Other La1.8.1 None
SRR6045445 Other lineage4.3.1.1 None
ERR4821245 Other lineage4.1.2.1 None
ERR4821119 Other lineage4.4.1.1 None
SRR6046117 RR-TB lineage4.9 None
ERR4821915 RR-TB lineage4.9 None
ERR4821214 RR-TB None
ERR4821222 Other lineage4.3.2.1 None
SRR5535854 MDR-TB lineage4.6.2.2 None
ERR4821891 Other lineage4.8 None
ERR4821325 Other lineage3 None
ERR4821286 Other lineage4.8 None
ERR4821310 Other lineage5 None
ERR4821264 Other lineage1.1.3 None
ERR4821981 Other lineage4.1.2.1 None
ERR4821331 HR-TB lineage4.8 None
ERR4821341 Other lineage4.3.4.1 None
ERR4821334 RR-TB lineage4.1.3 None
ERR4821373 HR-TB lineage4.1.2.1 None
ERR4822104 RR-TB lineage3 None
ERR4821372 Other lineage4.1.2.1 None
ERR4821409 Other lineage4.8 None
ERR4821417 Other lineage1.1.3.1 None
ERR4821408 Sensitive lineage4.1.2 None
ERR4821432 HR-TB lineage4.1.3;lineage1.1.3.1 None
ERR4821526 Other lineage4.3.2 None
ERR4822114 Other lineage4.1.2.1 None
ERR4822222 Other lineage3.1.2.2 None
ERR4821530 HR-TB lineage4.3.4.1 None
ERR4821550 Other lineage2.2.1 None
ERR4822189 Other lineage4.8 None
ERR4821572 Other lineage2.1 None
ERR4821704 MDR-TB lineage4.3.3 None
ERR4821610 Other lineage4.3.2 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821679 Other lineage4.3.3 None
ERR4821712 HR-TB None
SRR6044904 Other lineage3 None
ERR4821773 Other La1.6 None
SRR6045664 Other lineage4.2.1 None
SRR6045843 Other lineage4.2.2.2 None
SRR6044936 Other lineage4 None
SRR6045424 Other lineage1.1.2 None
SRR6045957 Other lineage4.9 None
SRR6045125 Other lineage1.1.2 None
SRR6046208 Other lineage4 None
SRR6045312 Other lineage1.1.3.3 None
SRR6044983 Other lineage3.1.1 None
SRR6045289 Other None
ERR1213874 MDR-TB lineage2.2.1 kr
SRR6046253 HR-TB lineage4.9 None
SRR6046246 Other lineage3 None
SRR6046275 Other lineage3.1.1 None
SRR6046299 HR-TB None
SRR6046359 Other lineage4.7 None
SRR6046616 Other lineage4.3.1.1 None
ERR1213875 Sensitive lineage4.3.3 de
ERR4828806 Other lineage4.1.4 None
ERR1213873 MDR-TB lineage4.3.4.2.1 rw
ERR1213930 Other lineage4.3.2 pe
ERR1213900 RR-TB lineage4.1.2.1 pe
SRR6046492 Other None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046848 Other lineage4.6.5 None
SRR6046815 Other lineage3 None
ERR11466070 Sensitive lineage4.3.4.1 None
SRR6046907 Other lineage4.9 None
ERR11466062 Sensitive lineage4.9.1 None
ERR4831117 HR-TB None
ERR502470 RR-TB lineage4.9 None
ERR4872193 MDR-TB lineage4.6 None
ERR4819699 HR-TB lineage4.6.2.2 gb
ERR4815427 HR-TB lineage3.1 gb
SRR7131030 Other lineage4.1.2.1 None
SRR7131182 Other lineage4.1.2.1 None
SRR7131109 Pre-XDR-TB lineage4.8 None
ERR11268038 Other La1.6 None
SRR7131296 Other lineage4.3.3 None
ERR11466061 Sensitive lineage4.9.1 None
SRR7645899 RR-TB lineage2.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR7645928 RR-TB lineage4.7 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR9971050 MDR-TB lineage4.1.1.3 None
SRR7646018 MDR-TB lineage4.2.1 None
ERR037234 Sensitive lineage4.9 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR7755655 Other lineage4.1.2.1 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
ERR4820188 Other lineage3 gb
ERR4818538 Sensitive lineage3 gb
ERR10796564 Other lineage4.3.3 None
ERR10796558 Sensitive lineage4 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796563 Other lineage4.3.3 None
ERR10796577 RR-TB lineage4.9 None
ERR10796565 RR-TB lineage4.9 None
ERR10796576 RR-TB lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796578 Other lineage2.2.1 None
ERR10796599 Other lineage4 None
ERR10796615 Other lineage4 None
ERR1213871 HR-TB lineage4.3.2 None
ERR10796620 Other lineage4.1.1 None
ERR10796627 Other lineage4 None
ERR10796633 RR-TB lineage4.3.4 None
ERR4821812 Sensitive lineage4.8 gb
ERR4821958 Other lineage4.3.3 gb
ERR3283006 RR-TB lineage4.9 None
ERR3283055 HR-TB None
ERR3445504 HR-TB None
ERR4822085 Other lineage4.8 gb
ERR3797046 HR-TB None
ERR3797062 RR-TB lineage4.9 None