Rv3596c - c.639G>C
Drug resistance types
38 Sensitive
27 RR-TB
13 HR-TB
19 MDR-TB
7 Pre-XDR-TB
1 XDR-TB
36 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 6 |
| lineage4.3.3 | 5 |
| lineage4.5 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.9 | 59 |
| lineage3 | 3 |
| lineage1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1 | 11 |
| lineage4.8.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage1.2.2.2 | 1 |
| 3 | |
| lineage3.1.1 | 2 |
| lineage4 | 9 |
| lineage4.1.1 | 1 |
| lineage5 | 2 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| La1.8.1 | 2 |
| lineage4.4.1.2 | 2 |
| La1.3 | 1 |
| La1 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9.1 | 1 |
| lineage4.8;lineage4.3.3 | 4 |
| lineage4.9;lineage2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage4.4.2 | 1 |
| lineage3.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 141 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2229198 | MDR-TB | lineage4.8 | None | ERR4818655 | Other | lineage4.3.3 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4819198 | Other | lineage2.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4820256 | Other | lineage2.2.1 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4821214 | RR-TB | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820833 | HR-TB | None | ERR4821093 | Other | lineage4.3.3 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4820324 | Other | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4821796 | Other | lineage4.1.1 | None | ERR4821310 | Other | lineage5 | None | ERR4821276 | Other | lineage3 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR11465490 | Sensitive | lineage4.1.2.1 | None | ERR11465830 | Sensitive | lineage4.9 | None | SRR9971122 | MDR-TB | lineage4.8 | None | ERR036207 | Other | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769517 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4798262 | HR-TB | La1 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1013610 | HR-TB | lineage4 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1062920 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1140574 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1172717 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR17567930 | Other | lineage4.4.1.1 | None | ERR4814312 | Other | lineage4 | None | ERR4815310 | Other | None | ERR4814623 | Other | lineage4.8 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR4816967 | RR-TB | lineage5 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4815550 | Other | lineage4 | None | ERR4814748 | Other | lineage4.8 | None | ERR4816964 | Other | lineage4.9 | None | ERR2027290 | RR-TB | lineage3.1 | None |
|---|
