EBG00000313325 - n.1030T>G
Drug resistance types
42 Sensitive
36 RR-TB
20 HR-TB
15 MDR-TB
16 Pre-XDR-TB
0 XDR-TB
97 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 61 |
| lineage2.2.1 | 23 |
| lineage4.2.2.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.4.2 | 3 |
| La2 | 1 |
| La1.4 | 1 |
| lineage2.2.1.1 | 3 |
| lineage2.2.2 | 2 |
| lineage4.1.2.1 | 11 |
| lineage3 | 13 |
| lineage4.8 | 16 |
| lineage4 | 16 |
| lineage4.3.2.1 | 3 |
| lineage4.5 | 2 |
| lineage1.2.1.2 | 1 |
| 6 | |
| lineage4.7 | 2 |
| lineage4.1 | 1 |
| lineage4.1.2 | 2 |
| La1.2.BCG | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.3.3 | 6 |
| lineage1.1.1 | 1 |
| lineage4.1.1.3 | 5 |
| lineage4.2.2.2 | 1 |
| La1.3 | 9 |
| lineage4.2.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| La1.8.1 | 4 |
| lineage4.6.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.9;lineage4.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4;La1.3 | 1 |
| lineage4.9;La1.3 | 3 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage3.1.3 | 1 |
| lineage6 | 2 |
| La1.6 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage2.2 | 1 |
| lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 226 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1184329 | MDR-TB | lineage4.9 | None | SRR11972327 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180203 | Sensitive | lineage4.2.2.1 | None | SRR14801325 | Pre-XDR-TB | lineage4.2.1 | None | SRR13423546 | Other | lineage4.4.2 | None | SRR13888750 | Other | La2 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR15316595 | RR-TB | lineage4.4.2 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18213909 | Other | lineage4.1.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18913779 | Other | lineage3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR20632814 | Sensitive | lineage4 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR21713567 | Sensitive | lineage4.5 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4815714 | Sensitive | lineage4.1.2.1 | gb | ERR4815471 | Other | lineage4.9 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR22424838 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR1750943 | Sensitive | lineage4 | None | ERR1750908 | Sensitive | lineage4 | None | ERR1750907 | RR-TB | None | ERR4814905 | Other | lineage4.8 | gb | SRR3675256 | Other | lineage4.7 | None | ERR4815502 | Other | lineage4.1 | None | ERR1750944 | Other | lineage4.1.2 | za | ERR4817069 | RR-TB | None | ERR4815556 | RR-TB | lineage3 | None | ERR4816964 | Other | lineage4.9 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR4816090 | Other | La1.2.BCG | None | ERR4816470 | Other | lineage3 | None | ERR4817107 | Other | lineage3 | gb | ERR4816417 | Other | lineage4.9 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816711 | Sensitive | lineage4.1.1 | gb | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816779 | Other | lineage3 | gb | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2432997 | Other | lineage4.8 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4818104 | Other | lineage4.1.2 | gb | ERR4818536 | Other | lineage4.9 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR2513259 | Other | lineage3 | None | ERR2513273 | Other | lineage4.1.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4820484 | Other | lineage4.8 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4819357 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR2514576 | Other | lineage4.8 | gb | ERR4819910 | Other | lineage4.9 | None | ERR1023509 | Other | None | ERR4819933 | Other | lineage4.9 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4821811 | RR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4821962 | Other | lineage4.1.1.3 | gb | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821894 | Other | lineage4 | gb | ERR4821492 | HR-TB | lineage3 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6046152 | Other | lineage4.9 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045124 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046839 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR3077969 | Other | La1.3 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | SRR6982246 | Sensitive | lineage4 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | SRR6982192 | Sensitive | lineage4.1.1.3 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | SRR6785281 | Other | lineage4.2.1.1 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR6832644 | Other | lineage4.3.3 | None | SRR6981948 | Sensitive | lineage4.3.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR5087623 | Other | La1.8.1 | None | ERR4831863 | HR-TB | lineage2.2.1.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR8600288 | Other | La1.8.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | DRR185024 | Other | lineage2.2.2 | None | DRR034348 | Other | lineage2.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | DRR184982 | RR-TB | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR10762291 | MDR-TB | lineage2.2.1 | None | ERR1063855 | Other | lineage4 | None | ERR10762248 | MDR-TB | lineage4.2.1 | None | ERR10796635 | Other | lineage4 | None | ERR10796560 | MDR-TB | lineage4.9;lineage4.1 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | ERR10796597 | Other | lineage4 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR3439441 | Other | La1.8.1 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3439265 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR4178161 | Other | lineage4.4.1.1 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769408 | Other | La1.3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769410 | Other | lineage4;La1.3 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769539 | Sensitive | lineage4.9 | None | ERR4769517 | Other | La1.3 | None | ERR4796577 | MDR-TB | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4811101 | Other | lineage4.4.2 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6865446 | Other | lineage4.4.1.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736820 | MDR-TB | lineage1.2.2.2 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR736837 | Other | lineage4.9 | None | ERR9117826 | Other | lineage3.1.3 | None | ERR9786276 | Sensitive | lineage4.8 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9787033 | Sensitive | lineage6 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR9787336 | Other | lineage6 | None | SRR1062928 | RR-TB | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172987 | HR-TB | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1184021 | Sensitive | lineage4.9 | None |
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