EBG00000313339 - n.2570C>T


Drug resistance types
17 Sensitive 20 RR-TB 15 HR-TB 40 MDR-TB 18 Pre-XDR-TB 1 XDR-TB 260 Other
lineage Counts
lineage Count
lineage3 38
lineage4.4.2 2
lineage3;lineage4.2.2.2 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.8.1 3
lineage4.3.3 12
lineage4.6.2.2 7
lineage1.2.1.1 2
lineage4.3.2 6
lineage2.2.1 54
lineage4.3.1.1 7
lineage4.6 2
lineage4.8 24
lineage4.1.1.3.1;lineage4.9 1
lineage4.4.1.1 10
lineage2.2.1.1 2
lineage3.1.2.2 2
lineage1.2.1.2.1 3
lineage4.1.2.1 20
lineage3.1 2
lineage4.9 30
La1.7;lineage2.2.1 1
lineage4.1.2 4
lineage4.3.4.2 7
lineage4.7 5
lineage4.2.2.2 8
lineage4.4.1.1.1 3
lineage2.2.1;lineage4.1.2.1 1
lineage3.1.3 1
lineage1.2.2.1 1
lineage2.2.2 6
lineage6.1.2 1
lineage3;lineage4 1
lineage3.1.2 4
lineage4.5 7
La1.7;M.canetti;lineage4.9 2
lineage4.3.4.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.1;lineage4.9 1
lineage1.2.2.2 8
lineage4.1.1.1 7
lineage1.1.2 8
lineage4.1.3 1
lineage4.2.2 3
lineage4.1.1.3 9
lineage4.6.1.1 1
lineage4.1.4 2
lineage4.6.5 2
lineage4.8.2;lineage4.9 1
lineage1.1.3.1 1
lineage4.8.2 4
lineage1.1.3.3 1
lineage4.2.1.1 2
lineage3.1.1 7
lineage2.2.1;lineage4 1
lineage4 1
lineage4.1.1.3.1 3
lineage3.1.2.1 3
lineage6.1.3 2
lineage3.1.2.1;lineage4 1
lineage4.3.2.1 1
M.canetti;lineage2.1;lineage4.9 1
lineage1.1.3.2 2
La1.8.1 1
lineage4.2.1 3
lineage4.2.1.1;lineage4.8 1
lineage4.1.2.1;lineage4.9 2
lineage3.1.1;lineage4 1
lineage4.2.1.1;lineage4.3.3 1
La1.7;lineage4.9 1
lineage4.3.4.1;lineage4.9 2
lineage4.4.1.1.1;lineage4.8 1
lineage2.2;lineage4.9 1
La3 1
spoligotype Counts
spoligotype Count
None 371
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR7069314 Other lineage3 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
SRR5818694 Other lineage3;lineage4.2.2.2 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR11342662 MDR-TB lineage4.8.1 None
ERR4818008 Other lineage4.3.3 None
ERR4819699 HR-TB lineage4.6.2.2 gb
SRR3675261 Other lineage1.2.1.1 None
ERR3148546 Other lineage4.3.2 None
SRR21798279 MDR-TB lineage2.2.1 None
SRR6045445 Other lineage4.3.1.1 None
SRR6044936 Other lineage4.6 None
SRR6045894 Other lineage4.8 None
SRR7070665 HR-TB lineage3 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
SRR5007165 Other lineage3 None
ERR4816866 Other lineage2.2.1 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR7069377 Other lineage3 None
SRR12062482 MDR-TB lineage2.2.1.1 None
SRR7069754 Other lineage4.3.2 None
ERR9117812 Other lineage4.3.1.1 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR11342640 MDR-TB lineage4.3.3 None
SRR18003042 Other lineage2.2.1 None
ERR4814362 Other lineage4.8 None
ERR4819017 Other lineage3 None
SRR6046440 Other lineage3.1.2.2 None
SRR7069899 Other lineage1.2.1.2.1 None
SRR2101627 Other lineage4.1.2.1 None
ERR4815427 HR-TB lineage3.1 gb
SRR7070461 Other lineage3 None
ERR4819307 Other lineage4.3.2 None
SRR3675552 Other lineage4.9 None
SRR20969923 Other La1.7;lineage2.2.1 None
SRR6046117 Other lineage4.9 None
SRR7069255 Other lineage4.1.2 None
ERR10796633 Other lineage4.3.4.2 None
SRR3675491 Other lineage4.7 None
ERR4829208 Other lineage4.8 None
ERR867538 Other lineage4.2.2.2 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
ERR867555 Other lineage3 None
ERR867569 Other lineage4.9 None
ERR2027257 Other lineage4.1.2.1 None
SRR7070532 Other lineage4.7 None
ERR4863405 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR7069628 Other lineage4.1.2.1 None
SRR6045267 RR-TB lineage4.8 None
SRR11342682 Other lineage4.1.2 None
SRR7069013 Other lineage4.8 None
SRR6045613 Other lineage3.1.3 None
SRR7070535 HR-TB lineage4.1.2.1 None
SRR19303796 Other lineage4.3.3 None
ERR867567 RR-TB lineage3 None
ERR2660505 Other lineage1.2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002937 Other lineage2.2.1 None
SRR19304094 Other lineage6.1.2 None
SRR11342686 MDR-TB lineage4.8 None
SRR3675230 Other lineage3;lineage4 None
SRR6045618 Other lineage3.1.2 None
SRR7069082 Other lineage4.1.2.1 None
SRR7131030 Other lineage4.1.2.1 None
ERR4815425 Other lineage4.5 gb
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR867554 Other lineage4.3.4.1 None
SRR6046020 Other lineage3 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4818465 Other lineage3 gb
SRR7069193 Other lineage4.3.1.1 None
SRR6046152 Other lineage4.9 None
SRR8217893 HR-TB lineage2.2.1 None
SRR6511600 MDR-TB lineage4.3.4.2 None
SRR6855774 Other lineage2.2.1 None
SRR7070276 Other lineage3 None
SRR11349208 MDR-TB lineage2.2.1 None
ERR2027290 Other lineage3.1.2.1;lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR6044841 Other lineage4.9 None
ERR9117725 Other lineage4.1.1.1 None
SRR18003047 MDR-TB lineage2.2.1 None
ERR2513837 Sensitive lineage4.1.2.1 gb
ERR867523 Pre-XDR-TB lineage2.2.1 None
SRR6045125 Other lineage1.1.2 None
SRR1208565 Other lineage4.9 None
ERR4821334 Other lineage4.1.3 None
ERR9117805 Other lineage4.3.2 None
SRR6046359 Other lineage4.7 None
SRR7070266 Other lineage1.1.2 None
SRR6046764 Other lineage4.2.2 None
SRR7069137 Other lineage4.8 None
SRR7131004 Other lineage4.6.2.2 None
ERR2660499 Sensitive lineage4.1.1.3 None
ERR3276170 Other lineage4.1.2.1 nl
SRR20969951 Other lineage4.4.2 None
SRR7069319 Other lineage4.5 None
ERR4818187 Other lineage4.6.1.1 gb
SRR18213726 Other lineage3 None
SRR6824324 Other lineage4.5 None
SRR13180370 Other lineage4.1.4 None
ERR4820332 Sensitive lineage2.2.1 None
SRR6046848 Other lineage4.6.5 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR2600422 MDR-TB lineage2.2.1 None
SRR7070031 Other lineage4.5 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR5007168 Other lineage4.8.2;lineage4.9 None
ERR867566 Other lineage4.9 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
SRR7069648 Other lineage4.6.2.2 None
ERR4819640 RR-TB lineage4.6.2.2 None
ERR3261389 Other lineage4.9 None
SRR6045158 Other lineage4.9 None
SRR7069216 Other lineage4.1.2.1 None
ERR10796578 Other lineage2.2.1 None
SRR7070154 Other lineage4.4.1.1 None
SRR11342676 HR-TB lineage4.6.2.2 None
DRR188816 Sensitive lineage4.2.2 None
ERR4819864 RR-TB lineage1.1.3.1 None
SRR22048392 Other lineage4.8 None
SRR3675527 Other lineage4.9 None
SRR6045422 Other lineage4.3.1.1 None
SRR6046159 Other lineage4.8.2 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR6046541 Other lineage4.9 None
SRR3675485 Other lineage2.2.1 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR4817987 Other lineage4.7 None
ERR4821791 Other lineage4.1.2.1 None
ERR10219868 Other lineage4.1.2.1 None
ERR4814782 HR-TB lineage2.2.1 None
SRR6045312 Other lineage1.1.3.3 None
SRR7070144 Other lineage4.8 None
SRR21239878 HR-TB lineage4.4.1.1 None
SRR7068946 Other lineage4.6.2.2 None
ERR4816429 Other lineage1.1.2 None
SRR6045052 HR-TB lineage4.2.1.1 None
SRR6046729 Other lineage3 None
SRR11342673 RR-TB lineage4.3.4.2 None
SRR5818672 Other lineage1.2.2.2 None
SRR6045726 Other lineage3 None
SRR6044838 Other lineage4.9 None
SRR6045909 Other lineage4.8.1 None
ERR4403541 Sensitive lineage4.8 None
SRR6046343 Other lineage2.2.1 None
ERR3261351 Other lineage4.9 None
SRR7069018 Other lineage4.8 None
SRR3675288 Other lineage3 None
ERR4815795 Other lineage1.1.2 None
ERR10796561 Other lineage4.3.2 None
SRR6046273 Other lineage3.1.2 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18213736 Other lineage3 None
ERR9117732 Other lineage1.2.2.2 None
SRR7069164 Other lineage4.8 None
ERR4820151 Other lineage4.8 None
ERR2517074 Pre-XDR-TB lineage3 gb
SRR18002874 MDR-TB lineage2.2.1 None
SRR7070564 Other lineage4.8.2 None
ERR2851354 Other lineage4.9 None
SRR6045138 Other lineage3.1.1 None
SRR6045424 Other lineage1.1.2 None
SRR11342680 Other lineage4.8 None
ERR4808964 RR-TB lineage2.2.1 None
SRR7068875 Other lineage3.1.2.2 None
SRR11342658 RR-TB lineage4.1.2 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR10851730 Other lineage4.3.3 None
SRR7069931 Other lineage4.2.2.2 None
ERR867568 Other lineage2.2.1;lineage4 None
ERR4816610 Other lineage4.3.3 None
ERR10219876 Other lineage4.3.4.2 None
SRR1202408 Other lineage4.9 None
SRR6045124 Other lineage4.9 None
SRR6045464 Other lineage4.1.1.3 None
SRR6046607 Other lineage3 None
SRR6046852 MDR-TB lineage3 None
SRR6045110 Other lineage3 None
SRR7131236 Other lineage4.3.4.2 None
SRR3675265 Other lineage4 None
SRR1735596 RR-TB lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR6046456 Other lineage4.1.1.3.1 None
SRR6045957 Other lineage4.9 None
SRR7069766 Other lineage4.1.2.1 None
SRR7069800 Other lineage3.1.2.1 None
SRR7131123 Other lineage4.8 None
ERR3806588 Other lineage6.1.3 None
SRR7069518 Other lineage4.8 None
SRR7069835 Other lineage2.2.1 None
SRR7069784 Other lineage1.2.2.2 None
SRR7069431 Other lineage4.1.2.1 None
SRR7070388 Other lineage3.1.2 None
ERR9117740 Other lineage3.1.1 None
SRR7070469 Other lineage4.3.1.1 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR7070369 Other lineage1.2.2.2 None
SRR21240202 HR-TB lineage4.4.1.1 None
SRR6045683 Other lineage3.1.2.1;lineage4 None
SRR11342691 MDR-TB lineage2.2.1 None
ERR2851359 Other lineage4.9 None
SRR7069812 Sensitive lineage4.1.1.1 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR6046521 Other lineage4.4.1.1 None
SRR19303949 Other lineage4.3.3 None
SRR7070293 Other lineage4.8 None
SRR6045591 Other lineage4.1.2.1 None
SRR6045516 Other lineage3.1.1 None
SRR3675245 Other lineage4.1.2.1 None
ERR9117676 Sensitive lineage4.2.2.2 None
ERR9896153 RR-TB lineage4.4.1.1 None
SRR11342636 MDR-TB lineage4.3.3 None
ERR4816883 Other lineage4.5 None
ERR9117714 Other lineage3.1.2 None
SRR5818586 RR-TB lineage4.2.2.2 None
ERR1665403 MDR-TB lineage2.2.1 None
SRR7069669 Other lineage3.1.1 None
SRR6855828 Other lineage4.3.2.1 None
ERR4815265 Other lineage2.2.1 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4828849 Sensitive lineage4.3.2 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR7069981 Other lineage3 None
ERR4815956 Other lineage1.1.2 None
SRR6045261 Other lineage1.1.2 gb
SRR2024953 MDR-TB lineage2.2.1 cn
SRR11342685 HR-TB lineage4.4.1.1 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
ERR4822032 Other lineage2.2.1 gb
SRR11972323 Other lineage1.1.3.2 None
ERR2886463 Sensitive lineage2.2.1 None
SRR1208900 Other lineage4.9 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4822105 Other lineage4.1.4 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR3675256 Other lineage4.7 None
SRR7069430 Other lineage3.1.1 None
ERR7821182 Other lineage1.1.3.2 None
SRR3675512 Other lineage2.2.1 None
ERR4817826 Other lineage4.5 None
SRR7236108 Other La1.8.1 None
SRR5709926 MDR-TB lineage2.2.1 None
SRR7070602 Other lineage4.2.1 None
SRR7131122 Other lineage2.2.1 None
SRR7131195 Other lineage2.2.1 None
ERR4821538 Other lineage3 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR21001883 XDR-TB lineage2.2.1 None
SRR6044993 Other lineage3 None
SRR1735598 RR-TB lineage4.9 None
SRR5007171 Sensitive lineage2.2.1 None
SRR6046291 Other lineage3 None
SRR6046766 Other lineage3.1.1 None
SRR11349207 RR-TB lineage2.2.1 None
SRR7069722 Other lineage4.1.2.1 None
SRR7069760 Other lineage3 None
ERR10796635 Other lineage4.8 None
SRR6896535 Other lineage4.1.1.3 None
ERR2027252 Other lineage4.2.1.1;lineage4.8 None
SRR15316084 Other lineage2.2.1 None
SRR5818610 Other lineage3 None
ERR10796599 Other lineage4.8 None
SRR7131163 Other lineage2.2.1 None
SRR18002932 Pre-XDR-TB lineage2.2.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR7131287 Other lineage2.2.1.1 None
ERR10796627 Other lineage4.1.2.1;lineage4.9 None
SRR10315465 MDR-TB lineage4.4.1.1 None
SRR7070632 Sensitive lineage3 None
SRR6046275 Other lineage3.1.1;lineage4 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11349193 RR-TB lineage4.1.2 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR19303820 RR-TB lineage4.8 None
ERR7821125 Sensitive lineage4.1.1.3 None
SRR7070553 Other lineage3 None
ERR9117827 Other lineage1.2.2.2 None
SRR11342669 Other lineage4.8 None
ERR10796564 Other lineage4.3.3 None
SRR6045071 Other lineage4.3.1.1 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR3675474 Other lineage4.1.1.1 None
SRR6046655 Other lineage4.1.2.1 None
SRR6045843 Other lineage4.2.2.2 None
SRR6046616 Other lineage4.3.1.1 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR2513681 Other lineage1.1.2 None
SRR7069675 Other lineage3 None
ERR867526 MDR-TB lineage2.2.1 None
SRR18003038 Other lineage2.2.1 None
SRR7070497 Other lineage4.8.2 None
ERR867575 Other lineage4.9 None
ERR10796620 Other lineage4.1.1.1 None
SRR5007169 RR-TB lineage4.8.2 None
SRR7070399 Other lineage2.2.1 None
ERR867574 Other lineage4.9 None
SRR6045603 Other lineage4.1.1.3 None
SRR6045553 Other lineage4.1.2.1;lineage4.9 None
SRR7070065 Other lineage4.1.1.1 None
SRR7070521 Other lineage4.2.1.1 None
SRR3675267 Other La1.7;lineage4.9 None
SRR18002997 Other lineage2.2.1 None
ERR4819224 Other lineage1.2.1.2.1 None
ERR10796563 Other lineage4.3.3 None
ERR3261359 Other lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR6045199 Other lineage2.2.1 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
ERR4816667 Other lineage2.2.2 None
SRR11342688 Other lineage4.2.2.2 None
SRR6046246 Other lineage3 None
SRR11342653 MDR-TB lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
SRR12062542 Pre-XDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR6045178 Other lineage3 None
SRR6045496 Other lineage6.1.3 None
SRR3675452 Other lineage3 None
ERR867541 MDR-TB lineage4.2.1 None
ERR4820162 Other lineage4.1.1.3 None
ERR4816579 Other lineage3 None
ERR9117678 Other lineage4.6.2.2 None
ERR10796558 Sensitive lineage4.3.4.1;lineage4.9 None
ERR2120270 MDR-TB lineage4.6.5 None
SRR6044904 Other lineage3 None
SRR21728726 HR-TB lineage1.2.1.2.1 None
ERR3559289 HR-TB lineage4.2.2 None
SRR6982391 Other lineage4.1.2.1 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR7069233 Other lineage1.2.2.2 None
SRR7131201 Other lineage4.8 None
SRR10315728 MDR-TB lineage4.4.1.1.1;lineage4.8 None
ERR867571 Other lineage4.9 None
SRR6045289 Other lineage2.2;lineage4.9 None
SRR7069074 Other lineage3 None
SRR6045384 Other lineage4.1.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR6045621 Other lineage4.1.1.3 None
SRR7069027 MDR-TB lineage4.3.4.2 None
ERR867573 Other lineage4.9 None
SRR6046485 Other lineage4.9 None
SRR7070165 Other lineage4.1.2.1 None
SRR11342655 MDR-TB lineage2.2.1 None
ERR4817822 Other lineage4.6 None
SRR6045743 Other lineage3 None
SRR7068927 Other lineage1.2.2.2 None
SRR18003023 Other lineage2.2.1 None
SRR3675556 Other lineage3 None
SRR7070134 Other lineage3.1.1 None
ERR867521 MDR-TB lineage2.2.1 None
SRR6785282 Other lineage4.3.3 None
ERR4815452 Other lineage4.3.3 None
SRR19325518 MDR-TB lineage2.2.1 None
SRR7069391 Other lineage4.9 None
ERR4820543 Other La3 None
SRR19303907 Other lineage4.8 None
SRR7070195 Sensitive lineage3.1.2.1 None
SRR7069839 Other lineage4.8 None
ERR4816688 Other lineage4.2.2.2 gb
SRR6044873 Other lineage4.1.1.3.1 None
SRR6045778 Other lineage3.1 None
ERR2027293 Other lineage4.3.4.2 None
SRR6045986 Other lineage3 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
SRR7069097 Other lineage3.1.2.1 None