EBG00000313339 - n.2937C>A
Drug resistance types
8 Sensitive
17 RR-TB
3 HR-TB
12 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
39 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 6 |
| lineage4.9 | 20 |
| lineage4.4.1.1 | 3 |
| lineage4.1.2.1 | 3 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage2.2.1 | 13 |
| lineage2.2.1;lineage4 | 1 |
| lineage6.1.3 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.3.1.1 | 1 |
| lineage3;lineage4 | 2 |
| lineage4.1.3 | 1 |
| lineage4.2.2 | 1 |
| lineage4.8 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.8.1 | 1 |
| La1.6 | 1 |
| lineage2.2.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.2.1 | 2 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.6 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 89 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1140716 | Other | lineage3 | None | ERR867544 | Other | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR502474 | RR-TB | lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SRR1173170 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR867571 | Other | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR3675552 | Other | lineage4.9 | None | ERR3806588 | Other | lineage6.1.3 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867575 | Other | lineage4.9 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR7070469 | Other | lineage4.3.1.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR867573 | Other | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | DRR188816 | Other | lineage4.2.2 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046020 | Other | lineage3 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | SRR3675509 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR10796598 | Other | lineage4.9 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | SRR6046117 | Other | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4818536 | Other | lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR7069835 | Other | lineage2.2.1 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR11342646 | HR-TB | lineage3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR21240161 | Sensitive | lineage4.1.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | SRR18003032 | Other | lineage2.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR6044936 | Other | lineage4.6 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None |
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