EBG00000313339 - n.2937C>A


Drug resistance types
12 Sensitive 40 RR-TB 9 HR-TB 24 MDR-TB 19 Pre-XDR-TB 0 XDR-TB 108 Other
lineage Counts
lineage Count
lineage4.6 1
lineage4.6.2.2 2
lineage4.9 31
lineage3 26
lineage3.1.1 4
lineage4.3.4.2.1 5
lineage4.4.1.1 6
lineage2.2.1 25
lineage4.1.2.1 20
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
lineage4 8
6
lineage4.6.1.1 2
lineage4.3.3 4
lineage4.5 1
lineage2.2.2 4
lineage4.2.2 2
lineage4.4.2 2
lineage4.1.1.3 2
lineage2.2.1.1 3
lineage4.8 10
lineage1.1.2 3
lineage4.1.3 2
lineage1.1.3.1 2
lineage4.9;lineage3.1.1 1
lineage2.2 1
lineage4.1 1
lineage5 2
lineage3.1.3 1
lineage1.2.1.1 1
lineage3.1 1
lineage4.6.1.2 1
lineage4.2.1.1 1
lineage1 2
lineage4.3.4.2 1
lineage3.1.2.1 1
lineage4.1.1 2
lineage4.2.2.2 3
lineage4.1.1.3.1 1
lineage1.2.2.2 3
lineage4.1.2 2
lineage4.3.4.1 3
lineage4.3.1.1 2
lineage4.7 2
lineage3.1.2 1
lineage4.6.5 1
La1.8.1 2
lineage4.3.2.1 1
lineage4.4.1.2 1
lineage6 1
spoligotype Counts
spoligotype Count
None 212
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9117704 Other lineage4.6 None
ERR9117678 Other lineage4.6.2.2 None
ERR6197022 Other lineage4.9 None
ERR9117788 Other lineage3 None
ERR9117740 Other lineage3.1.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049672 Other lineage3 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR10993951 RR-TB La1.6 None
SRR1062928 RR-TB lineage4 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1140736 RR-TB None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1173170 Other lineage4.9 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR1173182 Other lineage4.6.1.1 None
SRR1173281 RR-TB lineage3 None
SRR1173310 MDR-TB None
SRR1173740 Other None
SRR1173719 HR-TB lineage3 None
SRR1173770 Other lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR1180252 Other lineage4.9 None
SRR1181161 Other lineage4.9 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR1735596 RR-TB lineage4.9 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR16370329 HR-TB lineage4.5 None
SRR18002908 Other lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18002963 Other lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18003042 Other lineage2.2.1 None
SRR18213726 Other lineage3 None
SRR18909918 Other lineage2.2.1.1 None
ERR4815777 Other lineage4.9 None
SRR19303820 RR-TB lineage4.8 None
ERR4814312 Other lineage4 None
SRR21240161 Sensitive lineage4.1.2.1 None
SRR21727760 Other lineage2.2.1 None
SRR22424900 HR-TB lineage1.1.2 None
ERR4814415 Other lineage3.1.1 None
ERR4815780 MDR-TB lineage4.1.3 None
ERR4814714 Other lineage3 None
ERR4814617 Other lineage1.1.3.1 None
ERR4814748 Other lineage4.8 None
ERR171142 Other lineage4.9;lineage3.1.1 None
SRR3675230 RR-TB lineage3 None
ERR4814763 Other lineage2.2.1 None
ERR4815944 HR-TB lineage4.1.2.1 None
ERR4814896 Other lineage2.2.1.1 None
ERR4815901 Other lineage2.2 None
ERR4815502 Other lineage4.1 None
SRR3675509 Other lineage4.9 None
ERR4816967 RR-TB lineage5 None
ERR4816015 HR-TB lineage4.4.1.1 None
ERR4816991 Sensitive lineage4.9 None
ERR2027220 Other lineage3.1.3 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4816101 Other lineage4.1.2.1 None
SRR3675552 RR-TB lineage4.9 None
ERR2027290 RR-TB lineage3.1 None
ERR4817412 Sensitive lineage4.1.2.1 None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR4816510 Other lineage4.1.2.1 None
SRR3675565 Other lineage3 None
ERR4816493 Other lineage4.1.2.1 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4815811 HR-TB lineage4.2.1.1 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816782 Other lineage4.1.2.1 None
ERR4818988 Other lineage1 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4816425 Other lineage2.2.2 None
ERR4817874 Other lineage3 None
ERR4818064 Other lineage4.8 None
ERR4819011 Other lineage3.1.2.1 None
ERR4819017 RR-TB lineage3 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4818126 RR-TB lineage1 None
ERR4818259 RR-TB lineage4.1.1 None
ERR4818176 Other lineage4.1.2.1 None
ERR4818173 Other lineage2.2.1 None
ERR4818904 Other lineage4.8 None
ERR4818869 Other lineage4.2.2.2 None
ERR2512606 MDR-TB lineage3 None
ERR3276170 Other lineage4.1.2.1 nl
ERR4818393 RR-TB lineage3 None
ERR4818570 Other lineage4.3.3 None
ERR4818507 RR-TB lineage4.1.2.1 None
ERR4818536 Other lineage4.9 None
ERR4818522 Pre-XDR-TB lineage3 None
SRR5007170 RR-TB lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007165 MDR-TB lineage3 None
ERR4819096 Other lineage4.4.1.1 None
SRR5007204 Other lineage4.1.2.1 None
ERR4817584 MDR-TB lineage3 None
SRR5341365 Pre-XDR-TB lineage3 None
ERR4819217 Other lineage1.2.2.2 None
ERR2513743 Other lineage4.1.2 None
ERR4819462 Other lineage4 None
ERR4819329 Sensitive lineage4.6.2.2 None
ERR4820324 Other lineage4 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR4819383 RR-TB lineage4.9 None
ERR4819456 Other lineage4.8 None
ERR4819784 Other lineage4.1.2.1 None
ERR4819525 Other lineage3 None
ERR4819772 RR-TB lineage1.1.3.1 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819655 Other lineage4.8 None
ERR4819948 Other lineage4.4.1.1 None
ERR4819863 RR-TB lineage4.9 None
ERR4820030 Other lineage4.9 None
ERR4820151 RR-TB lineage4.8 None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4820833 HR-TB None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR4821769 Other lineage4.1.2.1 None
SRR6045424 Other lineage1.1.2 None
ERR4820161 Other lineage3 None
ERR4820959 Other lineage4.1.2.1 None
ERR4821007 RR-TB lineage1.2.2.2 None
SRR6046117 RR-TB lineage4.9 None
SRR6045422 Other lineage4.3.1.1 None
ERR4821214 RR-TB None
ERR4821172 RR-TB lineage4.9 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821245 Other lineage4.1.2.1 None
ERR4821981 Other lineage4.1.2.1 None
ERR4821288 Other lineage4.7 None
ERR4821334 RR-TB lineage4.1.3 None
ERR4821310 Other lineage5 None
SRR5818586 RR-TB lineage4.2.2.2 None
ERR4821341 Other lineage4.3.4.1 None
ERR4822063 Sensitive lineage4.9 None
ERR4821679 Other lineage4.3.3 None
SRR6045603 RR-TB lineage4.1.1.3 None
ERR4821409 Other lineage4.8 None
SRR6044769 Other lineage1.1.2 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045178 Other lineage3 None
SRR6045909 Other lineage4.8 None
SRR6045928 Other lineage4.9 None
SRR6044936 Other lineage4 None
SRR6046020 Other lineage3 None
SRR6045267 RR-TB lineage4 None
SRR6046273 Other lineage3.1.2 None
SRR6045384 Other lineage4.1.2 None
SRR6046275 Other lineage3.1.1 None
SRR6046616 Other lineage4.3.1.1 None
SRR6046291 Other lineage3 None
SRR6046359 Other lineage4.7 None
ERR2851359 Other lineage4.9 None
SRR6046484 Other lineage1.2.2.2 None
SRR6046729 Other None
ERR502474 Pre-XDR-TB lineage4.9 None
SRR6046815 Other lineage3 None
SRR6046848 Other lineage4.6.5 None
SRR6046852 MDR-TB lineage3 None
ERR2886463 Sensitive lineage2.2.1 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
SRR7131147 Other lineage4.1.2.1 None
ERR5311077 RR-TB La1.8.1 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR7131287 Other lineage2.2.1.1 None
ERR10796589 Other lineage4.9 None
SRR9971122 MDR-TB lineage4.8 None
DRR188816 Sensitive lineage4.2.2 None
ERR10796571 Other lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR9971168 Other lineage4.3.2.1 None
ERR10796558 Sensitive lineage4 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796599 Other lineage4 None
ERR10796595 Other lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR10796620 Other lineage4.1.1 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR4586795 Other La1.8.1 None
ERR3806588 Other lineage6 None