EBG00000313339 - n.2376T>G
Drug resistance types
69 Sensitive
25 RR-TB
56 HR-TB
23 MDR-TB
3 Pre-XDR-TB
1 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 121 |
| lineage3.1.3 | 1 |
| lineage4.3.4 | 1 |
| lineage4.4.1.1.1 | 3 |
| lineage4.8 | 23 |
| La1.3 | 4 |
| La1.8.1 | 8 |
| lineage2.2.1.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage2.2.1 | 13 |
| lineage4.1.2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.8.1 | 3 |
| lineage3 | 2 |
| lineage4 | 3 |
| lineage1.1.2 | 1 |
| lineage4.5 | 1 |
| M.canetti;lineage1 | 1 |
| La1;lineage4.9 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| lineage4.3.4.1 | 3 |
| lineage6.1.3 | 2 |
| 1 | |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage1.1.1 | 2 |
| La2;lineage4.9 | 1 |
| lineage4.2.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.1 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage6 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage1.2.1.1 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.1.1.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.2.1 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage2.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.4.1.2 | 1 |
| lineage6.1.2 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 239 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5818388 | Other | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR978756 | Other | lineage4.8 | None | ERR4769408 | Other | La1.3 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | ERR978747 | Other | lineage4.8 | None | SRR11462861 | Other | La1.8.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4769521 | RR-TB | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR4769514 | Other | La1.3 | None | SRR6981999 | Sensitive | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | SRR6855695 | Sensitive | lineage4.8 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR1180996 | Other | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR1035122 | HR-TB | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | ERR4816417 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4769516 | Sensitive | lineage4.9 | None | ERR978752 | Other | lineage4.8 | None | ERR3324368 | RR-TB | lineage1.1.2;lineage6.2.3 | None | SRR16156775 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR1792012 | Other | La1.8.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR2515230 | Sensitive | lineage4.8 | None | ERR1063896 | HR-TB | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR176651 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR1180345 | Other | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR4769554 | RR-TB | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR4819314 | HR-TB | lineage1.1.1 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | DRR188816 | Other | lineage4.2.2 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR4818536 | Other | lineage4.9 | None | ERR978762 | Other | lineage4.8 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR1181349 | Sensitive | lineage4 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR323062 | HR-TB | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR9787362 | Sensitive | lineage6 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR502510 | HR-TB | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR5818397 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR6045359 | HR-TB | lineage4.9 | None | SRR1792022 | Other | La1.8.1 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR5818395 | Sensitive | lineage4.9 | None | SRR5341298 | Other | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR7617847 | Other | La1.8.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR7535082 | Other | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR5341384 | HR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | SRR7236177 | Other | La1.8.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175474 | Other | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | SRR5341387 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR1184308 | RR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR4831618 | MDR-TB | lineage2.1 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3468488 | Other | La1.8.1 | None | SRR6044875 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR4769555 | Sensitive | La1.3 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR736834 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None |
|---|
