Rv0668 - c.138G>C
Drug resistance types
41 Sensitive
52 RR-TB
18 HR-TB
47 MDR-TB
21 Pre-XDR-TB
0 XDR-TB
55 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 10 |
| lineage2.2.1 | 29 |
| lineage4.2.1 | 5 |
| lineage4.8.1 | 1 |
| lineage4.3.4.2.1 | 6 |
| lineage4.3.2.1 | 3 |
| lineage4.9 | 75 |
| lineage4.9.1 | 1 |
| lineage4 | 10 |
| lineage4.1.1.3 | 4 |
| lineage4.4.1.2 | 1 |
| La1.8.1 | 3 |
| lineage6.2.3;lineage1.1.2 | 1 |
| lineage3.1.1 | 3 |
| lineage3 | 14 |
| La1.2 | 1 |
| La1.3 | 7 |
| lineage4.9;La1.3 | 2 |
| lineage4.1.2.1 | 6 |
| lineage2.2.2 | 2 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.7 | 2 |
| lineage5.1.1 | 2 |
| lineage4.6.1.2 | 5 |
| lineage4.8;lineage4.3.3 | 2 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La1.6 | 1 |
| lineage4.4.1.1.1 | 2 |
| 6 | |
| lineage4.9;lineage2.2 | 1 |
| lineage2 | 1 |
| lineage2.2 | 1 |
| lineage4.4 | 1 |
| lineage4.4.1.1 | 3 |
| lineage3.1.3 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.6.2.2 | 2 |
| La1.7.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.5 | 1 |
| lineage4.3.3 | 4 |
| lineage4;lineage2 | 1 |
| lineage1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.8.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 234 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR036207 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR037504 | Other | lineage4.9.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR10762297 | MDR-TB | lineage4.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3283053 | Other | lineage4.9 | None | ERR3324368 | RR-TB | lineage6.2.3;lineage1.1.2 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4596904 | MDR-TB | lineage3.1.1 | None | ERR4769418 | Other | La1.2 | None | ERR4769408 | Other | La1.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769436 | Other | La1.3 | None | ERR4769551 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | SRR1049672 | Other | lineage3 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049677 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049676 | MDR-TB | lineage4.8;lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1140736 | RR-TB | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173310 | MDR-TB | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173719 | HR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR16157123 | Other | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR19303773 | Other | lineage4.6.2.2 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR21469201 | Other | La1.7.1 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR4814709 | Other | lineage4.1.1 | None | ERR4816417 | Other | lineage4.9 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4816991 | Sensitive | lineage4.9 | None | ERR2229233 | Sensitive | lineage4 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4817204 | RR-TB | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4817453 | Sensitive | lineage4 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4819041 | Sensitive | lineage4.3.3 | gb | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820284 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR1023509 | Other | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820030 | Other | lineage4.9 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4820107 | RR-TB | None | SRR6046839 | Other | lineage4.9 | None | ERR4821057 | HR-TB | lineage4 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4821550 | Other | lineage2.2.1 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None | ERR4972574 | MDR-TB | lineage4.1.2.1.1 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6982141 | RR-TB | lineage4.3.3 | None | ERR5311077 | RR-TB | La1.8.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR7645927 | Other | lineage4.8 | None | SRR7645899 | RR-TB | lineage2.2.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR7755655 | Other | lineage4.1.2.1 | None |
|---|
