EBG00000313339 - n.2094C>T
Drug resistance types
10 Sensitive
13 RR-TB
7 HR-TB
39 MDR-TB
18 Pre-XDR-TB
0 XDR-TB
123 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.1 | 1 |
| lineage3 | 7 |
| lineage4.3.2 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.9 | 28 |
| lineage4.1.2.1 | 16 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1 | 46 |
| lineage4.8 | 20 |
| lineage4 | 3 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage2.2.2 | 4 |
| lineage4.1.1.3 | 8 |
| lineage1.2.1.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.3.3 | 6 |
| lineage4.8.1 | 2 |
| lineage3.1 | 1 |
| lineage4.4.2 | 4 |
| lineage1.2.1.1 | 1 |
| lineage4.4.1.1 | 5 |
| lineage4.3.4.2 | 3 |
| lineage2.2.1;lineage4.8 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage1.1.2 | 6 |
| lineage4.2.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage6.1.3 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage3.1.1;lineage4 | 1 |
| La3;lineage4 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1.2.2 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.7 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3 | 2 |
| lineage4.1.2 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.5 | 1 |
| lineage4.2.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4.2.2 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage6.2.3 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage6.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 210 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045516 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | ERR4972567 | MDR-TB | lineage4.3.2 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | SRR3675582 | Other | lineage4.9 | None | SRR11342689 | Other | lineage4.1.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | ERR867572 | Other | lineage4.9 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR4820829 | Other | lineage4.8 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR3283044 | Other | lineage4 | None | ERR10796558 | Sensitive | lineage4.3.4.1;lineage4.9 | None | ERR4819641 | Other | lineage4.6.2.2 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002964 | Other | lineage2.2.1 | None | ERR4830549 | MDR-TB | lineage4.1.1.3 | None | ERR4818128 | Other | lineage4.1.2.1 | None | ERR10796598 | Other | lineage4.9 | None | ERR11465411 | Sensitive | lineage4.1.1.3 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR4821054 | Sensitive | lineage3 | None | ERR10796566 | Other | lineage4.9 | None | SRR7069783 | Other | lineage4.1.2.1 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131216 | Other | lineage4.1.2.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR7131297 | Other | lineage1.2.1.2 | None | ERR10796555 | Other | lineage4.1.2.1 | None | SRR12062533 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR10796632 | Other | lineage4.3.3 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR6045778 | Other | lineage3.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR10796592 | Other | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | ERR10796561 | Other | lineage4.3.2 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003009 | MDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | ERR11465421 | Sensitive | lineage4.1.1.3 | None | SRR11342684 | HR-TB | lineage4.4.1.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR2600562 | MDR-TB | lineage2.2.1;lineage4.8 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR10796589 | Other | lineage4.9 | None | ERR3470682 | Other | lineage3 | None | SRR1169491 | MDR-TB | lineage1.1.2 | None | SRR22048474 | RR-TB | lineage4.8 | None | SRR7131196 | Other | lineage4.8 | None | SRR2101087 | Other | lineage4.4.2 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | SRR7070521 | Other | lineage4.2.1.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR7069082 | Other | lineage4.1.2.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR19304104 | Other | lineage4.8 | None | ERR10796624 | Other | lineage4.8 | None | ERR10796595 | Other | lineage4.9 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR7131145 | Other | lineage4.1.2.1 | None | SRR19303815 | Other | lineage4.8 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SAMN02599026 | MDR-TB | lineage1.1.2 | in | ERR2600422 | MDR-TB | lineage2.2.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | ERR3283043 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR10796553 | Other | lineage4.9 | None | SRR18002980 | Other | lineage2.2.1 | None | SRR18003032 | Other | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR3283051 | Other | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR7069074 | Other | lineage3 | None | SRR7070351 | Sensitive | lineage3 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR10796577 | Other | lineage4.9 | None | ERR3283008 | Other | lineage4.9 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR7069391 | Other | lineage4.9 | None | ERR10796599 | Other | lineage4.8 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR7131061 | Other | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796591 | Other | lineage4.9 | None | ERR4769512 | Sensitive | lineage4.9 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR10796560 | Other | lineage4.9 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | ERR3283028 | Other | La3;lineage4 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820742 | Sensitive | lineage4.3.4.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR11342669 | Other | lineage4.8 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6046210 | Other | lineage4.9 | None | SRR7131229 | Other | lineage4.1.2.1 | None | ERR10796626 | Other | lineage4.1.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR5007163 | Other | lineage3;lineage4.9 | None | SRR7068873 | Other | lineage4.8 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796634 | Other | lineage4.7 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR9907760 | Pre-XDR-TB | lineage4.3 | None | ERR10796559 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | ERR10796581 | Other | lineage4.1.2 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR10796620 | Other | lineage4.1.1.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR1172157 | MDR-TB | lineage1.1.2 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR1063855 | Other | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR10796573 | Other | lineage4.8 | None | SRR7070293 | Other | lineage4.8 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | SRR1180266 | MDR-TB | lineage1.1.2 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR10796596 | Other | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR19303960 | Sensitive | lineage4.4.1.2 | None | SRR6045928 | Other | lineage4.9 | None | SRR1180488 | MDR-TB | lineage1.1.2 | None | ERR10796582 | Other | lineage4.3.4.1 | None | ERR10796580 | Other | lineage4 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR10796593 | Other | lineage4.3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR10796631 | Other | lineage4.3.4.2;lineage4.9 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796568 | Other | lineage4.9 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | ERR11465412 | Sensitive | lineage4.1.1.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR6045384 | Other | lineage4.1.2.1 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR7069027 | MDR-TB | lineage4.3.4.2 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303899 | Other | lineage3 | None | SRR8375622 | MDR-TB | lineage1.1.2 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR10796635 | Other | lineage4.8 | None | ERR10796629 | Other | lineage4.1;lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18002956 | Other | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR19303907 | Other | lineage4.8 | None | ERR11465193 | Sensitive | lineage4.1.1.3 | None | ERR10796627 | Other | lineage4.1.2.1;lineage4.9 | None | ERR2600574 | MDR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR10796630 | Other | lineage6.2.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | ERR10796622 | Other | lineage4.8 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR4818440 | Other | lineage6.3.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR3675265 | Other | lineage4 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796628 | Other | lineage4.3.3 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR4829208 | Other | lineage4.8 | None | ERR10796621 | Other | lineage4.8 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR6045603 | Other | lineage4.1.1.3 | None | SRR7131147 | Other | lineage4.1.2.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR18002976 | Other | lineage2.2.1 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR18002937 | Other | lineage2.2.1 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR3675389 | Other | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None |
|---|
