EBG00000313339 - n.2094C>T


Drug resistance types
13 Sensitive 30 RR-TB 20 HR-TB 35 MDR-TB 19 Pre-XDR-TB 0 XDR-TB 224 Other
lineage Counts
lineage Count
lineage1.1.3.1 1
lineage1.2.2.2 4
lineage4.1.2 6
lineage4.8 34
lineage4.4.1.1 6
lineage1.1.3 1
lineage4.4.1 1
lineage3 24
lineage4 19
lineage2.2.1.1 3
lineage4.1.2.1 28
8
lineage1.2.1.1 1
lineage3.1.3 2
lineage4.1.1 5
lineage3.1 2
lineage4.9 43
lineage6.2.3 1
lineage4.7 5
lineage1.1.1 1
lineage4.3.3 8
lineage2.2.1 49
lineage4.5 2
lineage6.3.1 1
lineage4;lineage3 1
lineage6 1
lineage4.1.1.3.1 5
lineage4.6.2.2 4
lineage1.2.1.2.1 1
lineage3.1.1 3
lineage4.3.4.2.1 3
lineage4.3.4.2 6
lineage1.2.2 1
lineage4.3.1.1 3
lineage6.1.3 1
lineage4.1.1.3 8
lineage4.1.1.2 1
lineage1.1.2 7
lineage3.1.2 1
lineage4.2.2.2 3
lineage4.4 1
lineage3.1.2.2 3
lineage4.2.1.1 1
lineage1.1.3.3 1
lineage4.9;lineage3 1
lineage4.3.2 3
lineage4.6.5 1
lineage4.3.4.1 4
lineage1.2.1.2 1
lineage4.9;lineage1.1 1
lineage4.9;lineage4.1 1
lineage4.9;lineage4.3.4 1
lineage4.6 2
lineage4.3 2
lineage4.3.4 1
lineage4.4.1.1.1 1
lineage2.2.2 4
lineage2.2.2;lineage2.2.1 1
lineage2.2 1
lineage4.2.2 1
lineage4.4.2 3
lineage4.4.1.2 1
La1.2 1
spoligotype Counts
spoligotype Count
None 341
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4814617 Other lineage1.1.3.1 None
ERR4815669 HR-TB lineage1.2.2.2 None
ERR4814496 RR-TB lineage4.1.2 None
ERR4815193 MDR-TB lineage4.8 None
ERR4815257 HR-TB lineage4.4.1.1 None
ERR4814843 Other lineage1.1.3 None
ERR4815488 HR-TB lineage4.4.1 None
SRR3675273 Sensitive lineage3 None
SRR3675265 Other lineage4 None
ERR4814896 Other lineage2.2.1.1 None
ERR4815572 Other lineage4.1.2.1 None
SRR3675282 Other None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4815577 Other lineage3.1.3 None
SRR3675513 Other lineage4.8 None
ERR4817342 Other lineage4.1.1 None
ERR2027290 RR-TB lineage3.1 None
SRR3675547 Other lineage4.9 None
ERR2027257 Other lineage4.1.2.1 None
ERR2027255 HR-TB lineage4.4.1.1 None
ERR4816231 Other lineage4 None
ERR4817349 Other lineage4.9 None
SRR3675557 Other lineage4.9 None
ERR4816403 Other lineage6.2.3 None
ERR4816300 Other lineage4.1.2.1 None
ERR4816458 Other lineage1.2.2.2 None
ERR4816555 Other lineage3 None
ERR4817131 Pre-XDR-TB None
ERR4816604 RR-TB lineage4.1.2 None
ERR2229365 Sensitive lineage4.8 None
ERR4817189 Other lineage4.7 None
ERR4818663 Other lineage3 None
ERR4817194 Other lineage4.1.2.1 None
ERR4816882 Other lineage4.8 None
ERR4817703 Other lineage1.1.1 None
ERR4817294 Other lineage4.1.2 None
ERR4818655 Other lineage4.3.3 None
ERR2513401 HR-TB lineage3 None
ERR4817976 HR-TB lineage4.1.2.1 None
ERR2510804 Other lineage2.2.1 None
ERR4818128 RR-TB lineage4.1.2.1 None
ERR4818065 Other lineage4.1.2.1 None
ERR2515055 Other lineage3 None
ERR2510820 Other lineage4.8 None
ERR4818797 Other lineage4.5 None
ERR4818825 HR-TB lineage4.1.2.1 None
ERR4818190 Other lineage4.8 None
ERR4818440 Other lineage6.3.1 None
ERR4818259 RR-TB lineage4.1.1 None
ERR2509885 RR-TB lineage3 None
SRR5007163 MDR-TB lineage4;lineage3 None
SRR5007155 HR-TB lineage4.1.2.1 None
ERR4818574 Other lineage6 None
ERR2509886 RR-TB lineage3 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR4819093 Other lineage4.3.3 None
SRR5007204 Other lineage4.1.2.1 None
ERR4817555 RR-TB lineage3 None
ERR4817645 Other lineage4.8 None
ERR4819242 HR-TB lineage4.6.2.2 None
ERR2514181 Other lineage1.2.1.2.1 None
ERR4819267 Sensitive lineage3.1.1 None
ERR4819423 Other lineage4.6.2.2 None
ERR4820742 Other lineage4.3.4.2.1 None
ERR2514394 Other lineage4.3.4.2 None
ERR4819615 Other lineage4.3.4.2.1 None
ERR4820801 Other lineage1.2.2 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4819784 Other lineage4.1.2.1 None
ERR4819622 Other lineage4.1.2.1 None
ERR4820777 Other lineage4.1.2.1 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4820026 Other lineage3 None
ERR2514834 Other lineage4.7 None
ERR4819980 Other lineage4.1.2.1 None
ERR4820829 Other lineage4.8 None
SRR6046087 Other None
ERR4820075 Other lineage4.1.2.1 None
SRR6045422 Other lineage4.3.1.1 None
ERR4821288 Other lineage4.7 None
ERR4821053 Other lineage3 None
SRR6045516 Other lineage3.1.1 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
SRR6045553 RR-TB lineage4.9 None
ERR4821906 Other lineage4.1.1 None
ERR4821940 Other lineage4.9 None
ERR4821054 Other lineage3 None
SRR6046089 Other lineage4.1.2.1 None
ERR4821848 Other lineage2.2.1 None
SRR6045496 Other lineage6.1.3 None
ERR4821286 Other lineage4.8 None
ERR4822035 Other lineage4.8 None
ERR4822033 Other lineage3 None
ERR4822114 Other lineage4.1.2.1 None
ERR4821372 Other lineage4.1.2.1 None
SRR6045603 RR-TB lineage4.1.1.3 None
ERR4821492 HR-TB lineage3 None
ERR4822176 Other lineage4.1.1.2 None
SAMN02599026 MDR-TB lineage1.1.2 in
SRR6046113 Other lineage4.1.1.3 None
SRR6046210 Other lineage4 None
SRR6045613 Other lineage3.1.3 None
SRR6045683 Other lineage3.1.2 None
SRR5818388 Other lineage4.9 None
SRR6045621 Other lineage4.1.1.3 None
SRR6045655 Other lineage4.1.1.3.1 None
SRR6045790 Other lineage4.1.1.3.1 None
SRR6046152 Other lineage4.9 None
SRR6045763 Pre-XDR-TB lineage2.2.1 None
SRR6045778 Other lineage3.1 None
SRR5818690 Other lineage4.2.2.2 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6044784 MDR-TB lineage3 None
SRR6045843 Other lineage4.2.2.2 None
SRR6044769 Other lineage1.1.2 None
SRR6044838 Other lineage4.9 None
SRR6044787 Other lineage4.4 None
SRR6045944 Other lineage4.1.2.1 None
SRR6045909 Other lineage4.8 None
SRR6044841 Other lineage4.9 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6045928 Other lineage4.9 None
SRR6044993 Other lineage3 None
SRR6044958 Other lineage4.4.1.1 None
SRR6045295 Other lineage4.7 None
SRR6045952 HR-TB None
SRR6046020 Other lineage3 None
SRR6045178 Other lineage3 None
SRR6045267 RR-TB lineage4 None
SRR6045017 Other lineage3.1.2.2 None
SRR6045052 HR-TB lineage4.2.1.1 None
SRR6045064 Other lineage4.3.1.1 None
SRR6045071 Other lineage4.3.1.1 None
SRR6045312 Other lineage1.1.3.3 None
SRR6046482 HR-TB None
SRR6046239 Other lineage4.9;lineage3 None
SRR6046275 Other lineage3.1.1 None
SRR6046376 Other lineage3 None
ERR4829289 Other lineage4.1.2.1 None
ERR4829333 RR-TB lineage4 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046484 Other lineage1.2.2.2 None
SRR6045384 Other lineage4.1.2 None
SRR6046343 Other lineage2.2.1 None
ERR2851354 RR-TB lineage4.9 None
ERR2851359 Other lineage4.9 None
ERR4830549 MDR-TB lineage4.1.1.3 None
ERR4829208 RR-TB lineage4.8 None
SRR6046434 Sensitive lineage4.1.1 None
SRR6046442 Other lineage3 None
SRR6046737 Other lineage4.9 None
SRR6046497 Other lineage4.9 None
SRR6046517 Other lineage4.8 None
SRR6046729 Other None
SRR6046701 Other lineage3.1.2.2 None
SRR6046790 Other lineage4.7 None
SRR6982464 Sensitive lineage2.2.1 None
SRR6046802 Other lineage4 None
ERR4972567 MDR-TB lineage4.3.2 None
SRR6046848 Other lineage4.6.5 None
ERR11465412 Sensitive lineage4.1.1.3 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR7131068 Other lineage4.8 None
SRR7131096 Other lineage4.8 None
SRR7131109 Pre-XDR-TB lineage4.8 None
SRR7131123 Other lineage4.8 None
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
SRR7131061 Other lineage2.2.1 None
SRR7131075 Other lineage4.8 None
SRR7131145 Other lineage4.1.2.1 None
SRR7131147 Other lineage4.1.2.1 None
SRR7131161 Other lineage4.8 None
SRR7131216 Other lineage4.1.2.1 None
SRR7131195 Other lineage2.2.1 None
SRR7131196 Other lineage4.8 None
SRR7131198 Other lineage4.3.3 None
SRR7131234 Other lineage4.9 None
SRR7131230 HR-TB lineage4.3.4.2 None
SRR7131229 Other lineage4.1.2.1 None
SRR7131233 MDR-TB lineage4.3.3 None
SRR7131236 Other lineage4.3.4.2 None
ERR11465193 Sensitive lineage4.1.1.3 None
SRR7131237 Other lineage2.2.1 None
SRR7131297 Other lineage1.2.1.2 None
ERR11465421 Sensitive lineage4.1.1.3 None
ERR10219876 Other lineage4.3.4.2 None
ERR1063855 Other lineage4 None
ERR11465411 Sensitive lineage4.1.1.3 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796563 Other lineage4.3.3 None
ERR10796555 Other lineage4.1.2.1 None
ERR10796558 Sensitive lineage4 None
ERR10796559 Other lineage4.9 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796560 MDR-TB lineage4.9;lineage4.1 None
ERR10796561 Other lineage4.3.2 None
ERR10796568 Other lineage4.9 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796574 Other lineage4.9 None
ERR10796573 Other lineage4.8 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796571 Other lineage4.9 None
ERR10796578 Other lineage2.2.1 None
ERR10796577 RR-TB lineage4.9 None
ERR10796580 RR-TB lineage4.6 None
ERR10796582 HR-TB lineage4.3 None
ERR10796581 HR-TB lineage4.1.2 None
ERR10796589 Other lineage4.9 None
ERR10796590 Other lineage4.9 None
ERR10796588 Other lineage4 None
ERR10796592 Other lineage4 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796594 Other lineage4.9 None
ERR10796596 Other lineage4.9 None
ERR10796595 Other lineage4.9 None
ERR10796597 Other lineage4 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796599 Other lineage4 None
ERR10796615 Other lineage4 None
ERR10796620 Other lineage4.1.1 None
ERR10796626 Other lineage4.1.2 None
ERR10796622 Other lineage4.8 None
ERR10796621 Other lineage4.8 None
ERR10796624 Other lineage4.8 None
ERR10796629 Other lineage4 None
ERR10796627 Other lineage4 None
ERR10796628 Other lineage4.3.3 None
ERR3283041 Other lineage4.9 None
ERR10796630 HR-TB None
ERR10796631 Other lineage4.3.4 None
ERR10796632 Other lineage4.3.3 None
ERR10796634 Other lineage4 None
ERR10796636 Other lineage4.1.2.1 None
ERR3283008 Other lineage4.9 None
ERR3283028 Other None
ERR10796635 Other lineage4 None
ERR3283013 MDR-TB lineage4 None
ERR3283043 Other lineage4.9 None
ERR3283053 Other lineage4.9 None
ERR3283051 Other lineage4.9 None
ERR473279 Other lineage4.9 None
ERR4188158 Other lineage4.9 None
ERR3470682 Other lineage3 None
ERR3797035 Other lineage4.9 None
ERR4769512 Sensitive lineage4.9 None
ERR6197024 RR-TB lineage4.9 None
ERR6197030 Other lineage4.9 None
ERR6197028 Other lineage4.9 None
ERR6197032 Other lineage4.9 None
ERR6197042 RR-TB lineage4.9 None
ERR9117732 Other lineage1.2.2.2 None
ERR9030529 MDR-TB lineage1.1.2 None
ERR9117690 Other lineage4.8 None
ERR9117729 Other lineage3 None
ERR9117704 Other lineage4.6 None
SRR11342685 HR-TB lineage4.4.1.1 None
ERR9117794 Sensitive lineage3 None
ERR9907760 Pre-XDR-TB lineage4.3 None
SRR10315640 MDR-TB lineage4.8 None
SRR10315715 MDR-TB lineage4.4.1.1.1 None
ERR9117805 Other lineage4.3.2 None
SRR18002900 Pre-XDR-TB lineage2.2.1 None
SRR11349203 MDR-TB lineage4.4.1.1 None
SRR1172157 MDR-TB lineage1.1.2 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002876 MDR-TB lineage2.2.2;lineage2.2.1 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR11342688 Other lineage4.2.2.2 None
SRR11349207 RR-TB lineage2.2.1 None
SRR1169491 MDR-TB lineage1.1.2 None
SRR1173720 Other lineage4.9 None
SRR1180266 MDR-TB lineage1.1.2 None
SRR1180488 MDR-TB lineage1.1.2 None
SRR16058726 Other lineage2.2.1 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR18002901 MDR-TB lineage2.2.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR18002948 Other lineage2.2 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002956 HR-TB lineage2.2.1 None
SRR18002964 Other lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002980 Other lineage2.2.1 None
SRR18002997 Other lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002995 Other lineage4.4.2 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003049 Other lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003052 Other lineage2.2.1.1 None
SRR18003045 Other lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18913779 Other lineage3 None
SRR19303805 Other lineage4.8 None
SRR19303818 Other lineage4.3.4.2 None
SRR19303820 RR-TB lineage4.8 None
SRR19303815 Other lineage4.8 None
SRR19303819 Other lineage4.6.2.2 None
SRR19303817 Other lineage2.2.1 None
SRR19303899 Other lineage3 None
SRR19303917 Other lineage2.2.1 None
SRR19303907 Other lineage4.8 None
SRR19304029 Other lineage4.8 None
SRR19303949 Other lineage4.3.3 None
SRR19303960 Sensitive lineage4.4.1.2 None
SRR19304096 Other La1.2 None
SRR2101087 Other lineage4.4.2 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR19304035 Other lineage4.1.2.1 None
SRR19304083 Other lineage4.4.1.1 None
SRR19304104 Other lineage4.8 None
SRR19304115 Other lineage4.1.2.1 None
SRR21727760 Other lineage2.2.1 None
SRR22048474 RR-TB lineage4.8 None
SRR22424905 RR-TB lineage4.9 None