EBG00000313339 - n.698A>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
8 Sensitive
21 RR-TB
6 HR-TB
18 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.8 | 1 |
| lineage4.9 | 30 |
| lineage4.3.3 | 5 |
| lineage4.1.1.3.1 | 2 |
| lineage4.8.2 | 1 |
| lineage2.2.1 | 13 |
| lineage3;lineage4 | 2 |
| lineage4.3.4.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.2.2.2 | 2 |
| lineage4.1.1.1 | 2 |
| lineage4.1.2 | 2 |
| lineage4.3.1.1 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage3 | 2 |
| lineage4.8.1 | 3 |
| lineage2.2.2 | 2 |
| lineage4.4.1.1.1 | 3 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| lineage4.3 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 96 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR108125 | RR-TB | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR323037 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1062918 | Other | lineage3 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR867575 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR867572 | Other | lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046117 | Other | lineage4.9 | None | ERR867574 | Other | lineage4.9 | None | SRR1173515 | Sensitive | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR1196545 | Sensitive | lineage4.9 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR1238558 | Other | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None |
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