EBG00000313339 - n.698A>G
Drug resistance types
16 Sensitive
39 RR-TB
11 HR-TB
15 MDR-TB
17 Pre-XDR-TB
0 XDR-TB
134 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 27 |
| lineage4.9 | 40 |
| lineage4.1.2;lineage3.1 | 2 |
| lineage4.3.3 | 10 |
| lineage4.8 | 20 |
| lineage6 | 1 |
| lineage4.1.2.1 | 23 |
| lineage2.2 | 1 |
| lineage4.1.3 | 2 |
| lineage4.1.2 | 3 |
| lineage1.1.3.1 | 2 |
| lineage3 | 19 |
| lineage4.6.5 | 1 |
| lineage4.1 | 2 |
| lineage1.2.1.1 | 2 |
| lineage5 | 1 |
| lineage4 | 8 |
| 4 | |
| lineage3.1.2 | 2 |
| lineage4.5 | 4 |
| lineage1.1.1 | 2 |
| lineage4.7 | 3 |
| lineage4.1.1.3.1 | 6 |
| lineage4.3.4.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.4.1.1 | 4 |
| lineage1 | 1 |
| lineage5.1.3 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.3.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage1.1.2 | 3 |
| lineage4.3.4.2.1 | 5 |
| lineage4.8.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.2.2 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage3.1.1 | 3 |
| lineage4.2.2.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.1.1 | 2 |
| lineage4.3.1.1 | 2 |
| lineage2.2.2 | 1 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 232 |
Geographic prevalence
Country level data for this variant is available for 38 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18002933 | Other | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19304094 | Other | lineage6 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | ERR4815118 | Other | lineage2.2 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4814362 | Other | lineage4.8 | None | ERR4814496 | RR-TB | lineage4.1.2 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814623 | Other | lineage4.8 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4815471 | Other | lineage4.9 | None | ERR4815467 | Other | lineage3 | None | ERR4814681 | Other | lineage2.2.1 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4814821 | Other | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR4814905 | Other | lineage4.8 | gb | ERR4814952 | Sensitive | lineage3 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR4814911 | Other | lineage4.3.3 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816982 | Other | lineage4 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816423 | Other | lineage3.1.2 | None | ERR4816243 | Sensitive | lineage3 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4817060 | RR-TB | None | SRR3675565 | Other | lineage3 | None | ERR4816373 | Other | lineage4.1.2 | gb | ERR4817175 | Other | lineage4.8 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4816907 | Other | lineage1.1.1 | None | ERR2229369 | Other | lineage4.8 | None | ERR4816692 | Other | lineage4.1.2.1 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | ERR4817276 | Other | lineage2.2.1 | None | ERR4817506 | Sensitive | lineage3 | gb | ERR4817189 | Other | lineage4.7 | None | ERR4817206 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR4818726 | Other | lineage4.1.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4817735 | Other | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4817941 | Other | lineage4.8 | gb | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR4817952 | Other | lineage2.2.1 | gb | ERR2513401 | HR-TB | lineage3 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR2512532 | Other | lineage5.1.3 | gb | ERR4818050 | Other | lineage4.6.2.2 | None | ERR2512494 | Other | lineage4.3.3 | gb | ERR4819073 | Other | lineage4.1.2.1 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR4818393 | RR-TB | lineage3 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR4818287 | Other | lineage4.5 | gb | ERR4818904 | Other | lineage4.8 | None | ERR4818426 | Sensitive | lineage4.1.1.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818431 | Other | lineage1.1.2 | gb | ERR4818536 | Other | lineage4.9 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2513298 | Other | lineage4.8 | gb | SRR5007168 | RR-TB | lineage4.9 | None | ERR4820720 | Other | lineage4.1.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR2512884 | Other | lineage4.6.2.2 | gb | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR2512941 | Other | lineage1.1.2 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4819166 | Other | lineage3 | gb | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR2513657 | Other | lineage1.2.2.2 | gb | ERR4820266 | RR-TB | lineage3 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4820284 | Other | lineage4.9 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR2513924 | RR-TB | lineage4.8 | None | ERR4820318 | Other | lineage4.2.2 | None | ERR2513976 | Other | lineage4.8 | gb | ERR4819357 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4819368 | Sensitive | lineage4.8 | gb | ERR4820736 | Other | lineage4.1.2.1 | gb | ERR2514073 | Other | lineage4.1.1.3.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820324 | Other | lineage4 | None | ERR2514173 | Other | lineage4.5 | gb | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4820408 | Other | lineage4.1.2.1 | None | ERR4820369 | Other | lineage2.2.1 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819576 | Other | lineage4.2.2 | gb | ERR4820787 | Other | lineage3.1.1 | gb | ERR2514393 | Other | lineage4.1.1.3.1 | gb | ERR4819593 | Other | lineage4.5 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820891 | Other | lineage4.9 | gb | ERR4820484 | Other | lineage4.8 | None | ERR4819830 | Other | lineage2.2.1 | None | ERR4819868 | MDR-TB | lineage4.2.2.1 | gb | ERR4819863 | RR-TB | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820820 | Other | lineage1.2.1.1 | gb | ERR4821769 | Other | lineage4.1.2.1 | None | ERR4819933 | Other | lineage4.9 | None | ERR2514943 | Other | lineage4.8 | gb | ERR4820030 | Other | lineage4.9 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4819980 | Other | lineage4.1.2.1 | None | SRR6045464 | Other | lineage4.1.1.3 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821159 | MDR-TB | lineage4.2.2.1 | gb | ERR4821906 | Other | lineage4.1.1 | None | ERR4821200 | Other | lineage4.1.1 | gb | ERR4821286 | Other | lineage4.8 | None | ERR4821288 | Other | lineage4.7 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4822105 | Other | lineage4.1 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4822225 | Sensitive | lineage3 | gb | SRR6045683 | Other | lineage3.1.2 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR4821761 | Other | lineage3 | gb | SRR6045957 | Other | lineage4.9 | None | SRR6045899 | Other | lineage4.1.2.1 | gb | SRR6046534 | Other | lineage1.1.2 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4829453 | Sensitive | lineage4.4.1.1 | it | SRR6046281 | Other | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046646 | Other | lineage4.7 | gb | SRR6046737 | Other | lineage4.9 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046815 | Other | lineage3 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | SRR6982389 | Other | lineage4.1.2;lineage3.1 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | SRR7131296 | Other | lineage4.3.3 | None | DRR185024 | Other | lineage2.2.2 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796563 | Other | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR10796635 | Other | lineage4 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359070 | Other | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR736831 | HR-TB | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR9117676 | Other | lineage4.2.2.2 | None | ERR9117760 | HR-TB | lineage4.3 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1140736 | RR-TB | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR13837692 | Sensitive | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173740 | Other | None | SRR1196545 | HR-TB | lineage4.9 | None |
|---|
