EBG00000313339 - n.2496T>C
Drug resistance types
174 Sensitive
41 RR-TB
36 HR-TB
75 MDR-TB
32 Pre-XDR-TB
1 XDR-TB
281 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3.1.2;lineage4.1.1.3.1 | 1 |
| lineage4.3.2.1 | 17 |
| lineage4.5 | 6 |
| La1.8.1 | 23 |
| lineage2.2.1 | 158 |
| lineage2.2.1.1 | 8 |
| lineage3 | 17 |
| lineage4.3.4.2 | 9 |
| lineage4.4.1.1 | 19 |
| lineage4.9 | 77 |
| La1.2.BCG | 7 |
| lineage1.1.3.2 | 4 |
| lineage4.8 | 63 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 5 |
| lineage4.2.2 | 12 |
| lineage1.2.1.2.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.1.1.3 | 9 |
| La1.8.1;lineage4.9 | 4 |
| La1.2.BCG;lineage4.9 | 6 |
| lineage2.2.2 | 9 |
| lineage4.4.2 | 4 |
| lineage4.2.1 | 5 |
| lineage4.1.2 | 9 |
| lineage4.3.4.1 | 5 |
| 2 | |
| La1.3 | 1 |
| lineage4.3.3 | 28 |
| lineage4.8.1 | 7 |
| lineage4.8;lineage4.9 | 1 |
| lineage1.2.2.2 | 7 |
| lineage3;lineage4.2.2.2 | 1 |
| lineage1.2.1.1 | 2 |
| lineage1.1.2 | 4 |
| lineage1.1.2;lineage4 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| La1.7.1 | 4 |
| lineage4.1.4 | 3 |
| lineage4.3.1.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage4.6.5 | 2 |
| La1.7;lineage2.2.1 | 1 |
| lineage4.7 | 5 |
| lineage5.1 | 1 |
| lineage4.1.1.1 | 6 |
| lineage4.6.1.2 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage4.3.4.1;lineage4.9 | 1 |
| lineage3.1.1 | 4 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.4.1.2 | 1 |
| lineage6.2.3 | 1 |
| lineage4.6.1.1 | 3 |
| lineage6.2.2 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2.2.1;lineage4 | 2 |
| La3;lineage4 | 1 |
| lineage4.1.2.1 | 14 |
| lineage3.1.2.1 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4 | 3 |
| lineage4.1.1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.2.1.1;lineage4.8 | 1 |
| La1.4 | 1 |
| lineage3.1.2.2 | 1 |
| lineage3.1.1;lineage4 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.2.2.2 | 5 |
| lineage4.3.2 | 2 |
| La1.2 | 3 |
| lineage6.3.1 | 1 |
| lineage3.1.3 | 1 |
| lineage1.1.3.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2 | 2 |
| lineage3;lineage4 | 1 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage4.8.2 | 1 |
| lineage1.2.2.1 | 1 |
| lineage6.1.3 | 1 |
| lineage1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 640 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2514430 | Other | lineage3.1.2;lineage4.1.1.3.1 | None | SRR6855828 | Other | lineage4.3.2.1 | None | SRR7069319 | Other | lineage4.5 | None | ERR4187995 | Sensitive | La1.8.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869074 | Sensitive | lineage2.2.1.1 | None | SRR7069981 | Other | lineage3 | None | SRR10129602 | Sensitive | lineage4.3.4.2 | None | SRR6824324 | Other | lineage4.5 | None | SRR11349203 | MDR-TB | lineage4.4.1.1 | None | SRR1208473 | Other | lineage4.9 | None | SRR1019127 | Other | lineage4.9 | None | SRR1915484 | Other | La1.2.BCG | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR978747 | Other | lineage4.8 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | SRR17856664 | Sensitive | lineage3 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | ERR2228900 | Other | lineage4.8 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | ERR867566 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | ERR3261389 | Other | lineage4.9 | None | SRR11972323 | Other | lineage1.1.3.2 | None | ERR3559304 | HR-TB | lineage4.2.2 | None | SRR10614047 | Sensitive | lineage4.9 | None | SRR10869268 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | SRR1209067 | Other | lineage4.9 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | SRR6824572 | MDR-TB | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4187921 | Sensitive | lineage4.9 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR4188372 | Sensitive | La1.8.1;lineage4.9 | None | ERR2228965 | Other | lineage4.8 | None | SRR1915485 | Other | La1.2.BCG | None | SRR18002926 | Other | lineage2.2.1 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR16295772 | Other | lineage2.2.1 | None | SRR5007180 | Other | lineage2.2.1 | None | ERR3559286 | HR-TB | lineage4.2.2 | None | SRR16295760 | Other | lineage2.2.1 | None | ERR560443 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR9971076 | Sensitive | lineage2.2.1.1 | None | SRR1238558 | Other | lineage4.9 | None | SRR7236108 | Other | La1.8.1 | None | SRR16295767 | Other | lineage2.2.1 | None | SRR6824519 | MDR-TB | lineage2.2.1 | cn | SRR15368914 | MDR-TB | lineage2.2.1 | None | SRR6046541 | Other | lineage4.9 | None | SRR6855917 | Sensitive | lineage4.8 | None | SRR6896340 | Sensitive | lineage4.4.1.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | ERR2229811 | Other | lineage4.8 | dk | SRR6824603 | Sensitive | lineage4.4.2 | None | ERR5864322 | MDR-TB | lineage4.2.1 | None | SRR10129360 | Sensitive | lineage4.3.4.2 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR245740 | Sensitive | lineage4.1.2 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SAMN02350456 | Sensitive | lineage4.3.2.1 | None | SRR14782760 | Sensitive | lineage4.3.4.1 | None | SRR16295770 | Other | lineage2.2.1 | None | SRR16295808 | Other | lineage2.2.1 | None | ERR144568 | Sensitive | None | SRR5067459 | HR-TB | lineage4.2.2 | None | ERR5162118 | Other | La1.8.1 | None | ERR978734 | RR-TB | lineage4.8 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR2101816 | Other | lineage4.8 | None | ERR4769546 | Other | La1.3 | None | SRR19303907 | Other | lineage4.8 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR6045909 | Other | lineage4.8.1 | None | SRR16295741 | Other | lineage2.2.1 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR16295828 | Other | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | ERR2027293 | Other | lineage4.3.4.2 | None | ERR2228810 | Other | lineage4.8;lineage4.9 | None | ERR3261351 | Other | lineage4.9 | None | ERR4188035 | Other | La1.8.1 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR6981993 | Sensitive | lineage4.3.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR7516395 | MDR-TB | lineage2.2.1 | None | SRR5818694 | Other | lineage3;lineage4.2.2.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18213736 | Other | lineage3 | None | SRR6856094 | Other | lineage2.2.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6981912 | Sensitive | lineage4.3.2.1 | None | SRR6982138 | Sensitive | lineage4.1.1.3 | None | SRR1208906 | Other | lineage4.9 | None | ERR560438 | Other | lineage4.9 | None | ERR560449 | HR-TB | La1.2.BCG;lineage4.9 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR16295771 | Other | lineage2.2.1 | None | SRR16295798 | Other | lineage2.2.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | ERR2600577 | Pre-XDR-TB | lineage2.2.1 | None | ERR2851354 | Other | lineage4.9 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR181708 | RR-TB | lineage1.1.2;lineage4 | None | SRR7070665 | HR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR5007165 | Other | lineage3 | None | SRR11972390 | MDR-TB | lineage2.2.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | ERR5162133 | Sensitive | La1.8.1 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | SRR16295787 | Other | lineage2.2.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR7236178 | Other | La1.8.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | SRR1208775 | Other | lineage4.9 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR18003042 | Other | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR10123877 | Sensitive | lineage4.1.4 | None | SRR10129719 | Sensitive | lineage4.3.3 | None | SRR10130137 | Sensitive | lineage4.3.3 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR16295806 | Other | lineage2.2.1 | None | ERR8025347 | Sensitive | lineage4.9 | None | SRR16295738 | Other | lineage2.2.1 | None | SRR16295788 | Other | lineage2.2.1 | None | SRR11342669 | Other | lineage4.8 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6046210 | Other | lineage4.9 | None | ERR560442 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR6982510 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR3559287 | HR-TB | lineage4.2.2 | None | SRR7131123 | Other | lineage4.8 | None | SRR20969923 | Other | La1.7;lineage2.2.1 | None | ERR5865118 | MDR-TB | lineage2.2.1 | None | SRR6981918 | Sensitive | lineage4.4.1.1 | None | SRR3675491 | Other | lineage4.7 | None | ERR4829208 | Other | lineage4.8 | None | SRR7069784 | Other | lineage1.2.2.2 | None | SRR10130139 | Sensitive | lineage4.3.3 | None | ERR4192364 | Sensitive | lineage5.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | ERR978752 | Other | lineage4.8 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | ERR4627379 | Other | La1.8.1 | None | SRR1202378 | Other | lineage4.9 | None | SRR1208731 | Sensitive | lineage4.9 | None | SRR16295818 | Other | lineage2.2.1 | None | ERR4769424 | Sensitive | lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR6982011 | Sensitive | lineage4.1.1.1 | None | ERR4188396 | Sensitive | La1.8.1;lineage4.9 | None | SRR6982405 | Sensitive | lineage4.4.1.1 | None | ERR2229366 | Other | lineage4.8 | None | SRR2101663 | Sensitive | lineage1.1.3.2 | None | SRR16295821 | Other | lineage2.2.1 | None | ERR5162108 | Other | La1.8.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | ERR560440 | Sensitive | La1.2.BCG;lineage4.9 | None | ERR4769527 | Sensitive | lineage4.9 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | ERR5758436 | Other | lineage2.2.2 | None | SRR16295765 | Other | lineage2.2.1 | None | SRR9971256 | MDR-TB | lineage2.2.1 | None | SRR16295740 | Other | lineage2.2.1 | None | SRR16295769 | Other | lineage2.2.1 | None | ERR911929 | Other | lineage4.8 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | ERR4188330 | Sensitive | La1.8.1;lineage4.9 | None | SRR6982419 | Other | lineage4.8 | None | SRR16295791 | Other | lineage2.2.1 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR5087912 | Other | La1.8.1 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR6855851 | Other | lineage4.3.4.2.1 | None | ERR560451 | HR-TB | La1.2.BCG | None | SRR3675512 | Other | lineage2.2.1 | None | ERR2179695 | Sensitive | lineage4.5 | None | ERR5311080 | Other | La1.8.1 | None | SRR16295793 | Other | lineage2.2.1 | None | SRR1208283 | Sensitive | lineage4.9 | None | ERR2229147 | Other | lineage4.8 | None | ERR867571 | Other | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR6982053 | Sensitive | lineage4.3.4.1;lineage4.9 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR16295761 | Other | lineage2.2.1 | None | SRR9971029 | MDR-TB | lineage2.2.2 | None | SRR16295790 | Other | lineage2.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR10482948 | Other | La1.8.1 | None | SRR20970034 | HR-TB | lineage4.5 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR4769505 | Other | lineage4.9 | None | SRR10315630 | MDR-TB | lineage4.3.3 | None | SRR21001883 | XDR-TB | lineage2.2.1 | None | SRR13423641 | Sensitive | lineage2.2.1 | None | SRR7236240 | Other | La1.8.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR3675556 | Other | lineage3 | None | SRR11972420 | MDR-TB | lineage2.2.1 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | ERR10796625 | Other | lineage4.4.1.1 | None | SRR11349205 | MDR-TB | lineage2.2.1 | None | SRR16295743 | Other | lineage2.2.1 | None | SRR16627757 | Sensitive | lineage3 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR6046729 | Other | lineage3 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR6045726 | Other | lineage3 | None | SRR7069391 | Other | lineage4.9 | None | SRR16295810 | Other | lineage2.2.1 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | SRR6981968 | Sensitive | lineage4.1.2 | None | ERR2027256 | Other | lineage4.1.2 | None | SRR11342648 | MDR-TB | lineage4.1.1.3 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR7069839 | Other | lineage4.8 | None | SRR6855963 | Sensitive | lineage2.2.1 | None | SRR6856087 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR1791940 | Other | La1.8.1 | None | ERR2229733 | Other | lineage4.8 | dk | SRR16295780 | Other | lineage2.2.1 | None | ERR978751 | Other | lineage4.8 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR8217919 | HR-TB | lineage2.2.1 | None | SRR9971017 | HR-TB | lineage2.2.1 | None | SRR9971223 | Other | lineage2.2.1 | None | SRR6982078 | Sensitive | lineage4.9 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR21798279 | MDR-TB | lineage2.2.1 | None | ERR3559281 | HR-TB | lineage4.2.2 | None | ERR3559282 | HR-TB | lineage4.2.2 | None | SRR6397733 | Other | lineage4.4.1.2 | None | ERR2660545 | Sensitive | lineage4.3.2.1 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | ERR4188253 | Other | La1.8.1 | None | ERR10796630 | Other | lineage6.2.3 | None | ERR1199001 | Sensitive | lineage4.6.1.1 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR9787142 | Sensitive | lineage6.2.2 | None | ERR2228910 | Other | lineage4.8 | None | SRR15723110 | Sensitive | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR7444074 | Sensitive | lineage4.9 | None | SRR1792378 | Other | La1.8.1 | None | SRR1202421 | Other | lineage4.9 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR3283028 | Other | La3;lineage4 | None | ERR1199007 | Sensitive | lineage4.6.1.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR6982057 | HR-TB | lineage4.3.3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR21240038 | Other | lineage4.1.2.1 | None | SRR6045124 | Other | lineage4.9 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | SRR11871432 | Pre-XDR-TB | lineage2.2.1 | None | SRR1915486 | HR-TB | La1.2.BCG | None | SRR18149443 | Sensitive | lineage3 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR978756 | Other | lineage4.8 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR16295746 | Other | lineage2.2.1 | None | SRR16295783 | Other | lineage2.2.1 | None | SRR7069800 | Other | lineage3.1.2.1 | None | SRR2101689 | Sensitive | lineage4.3.4.1 | None | SRR18002876 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR6982014 | Sensitive | lineage4.1.1 | None | SRR7069835 | Other | lineage2.2.1 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR6982558 | Sensitive | lineage4.3.4.2.1 | None | SRR1202656 | Sensitive | lineage4.9 | None | SRR7240537 | Other | La1.8.1 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR867526 | MDR-TB | lineage2.2.1 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | ERR4188352 | Sensitive | La1.8.1 | None | SRR18391772 | Other | La1.7.1 | None | SRR11342656 | MDR-TB | lineage2.2.1 | None | SRR16295825 | Other | lineage2.2.1 | None | ERR3559279 | HR-TB | lineage4.2.2 | None | SRR7069628 | Other | lineage4.1.2.1 | None | SRR9971147 | RR-TB | lineage2.2.1 | None | SRR1202714 | Sensitive | lineage4.9 | None | SRR6982196 | Sensitive | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | ERR9907785 | RR-TB | lineage4.3.2.1 | None | ERR2179850 | Sensitive | lineage4 | None | SRR20969951 | Other | lineage4.4.2 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR18003049 | Other | lineage2.2.1 | None | ERR2228899 | Other | lineage4.8 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR8073606 | Other | La1.8.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR6982056 | Other | lineage4.3.4.2.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR16295731 | Other | lineage2.2.1 | None | SRR11349201 | MDR-TB | lineage4.1.1.3 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR18002964 | Other | lineage2.2.1 | None | SRR3675256 | Other | lineage4.7 | None | ERR3559289 | HR-TB | lineage4.2.2 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR4769419 | Sensitive | lineage4.9 | None | ERR4187641 | Sensitive | La1.8.1;lineage4.9 | None | ERR978735 | Other | lineage4.8 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | SRR3675527 | Other | lineage4.9 | None | SRR6807688 | Pre-XDR-TB | lineage4.2.1 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6982448 | Sensitive | lineage2.2.1;lineage4 | None | SRR16295737 | Other | lineage2.2.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR17406743 | HR-TB | lineage1.1.2 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6982077 | Sensitive | lineage4.3.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | ERR978754 | RR-TB | lineage4.8 | None | ERR4188202 | Other | La1.8.1 | None | ERR6866186 | Sensitive | lineage4.8 | None | ERR10219868 | Other | lineage4.1.2.1 | None | SRR7444098 | Sensitive | lineage4.9 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR11972274 | RR-TB | lineage1.2.1.2.1 | None | SRR1202544 | Other | lineage4.9 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR18003023 | Other | lineage2.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR6982174 | Sensitive | lineage4.3.3 | None | SRR11342646 | HR-TB | lineage3 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR2101617 | Sensitive | lineage4.1.1.1 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR6896535 | Other | lineage4.1.1.3 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982102 | Sensitive | lineage2.2.1 | None | ERR2027252 | Other | lineage4.2.1.1;lineage4.8 | None | SRR11342692 | MDR-TB | lineage2.2.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR16295758 | Other | lineage2.2.1 | None | SRR16295809 | Other | lineage2.2.1 | None | ERR978694 | Other | lineage4.8 | None | SRR15316084 | Other | lineage2.2.1 | None | SRR16278292 | Other | La1.4 | None | SRR16295792 | Other | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR16295829 | Other | lineage2.2.1 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR2600574 | MDR-TB | lineage2.2.1 | None | ERR978727 | Other | lineage4.8 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982362 | Sensitive | lineage4.3.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR978750 | RR-TB | lineage4.8 | None | SRR6982178 | Sensitive | lineage2.2.1 | None | SRR16295742 | Other | lineage2.2.1 | None | SRR16295766 | Other | lineage2.2.1 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR11349210 | MDR-TB | lineage4.4.1.1.1 | None | SRR7068875 | Other | lineage3.1.2.2 | None | ERR978733 | RR-TB | lineage4.8 | None | SRR5074094 | HR-TB | lineage2.2.1.1 | None | SRR6046275 | Other | lineage3.1.1;lineage4 | None | SRR1208436 | Other | lineage4.9 | None | ERR978761 | Other | lineage4.8 | None | SRR6982037 | Sensitive | lineage4.1.1.1 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR9971025 | Other | lineage2.2.1 | None | ERR9786008 | Sensitive | lineage1.1.1.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR10851730 | Other | lineage4.3.3 | None | SRR7069931 | Other | lineage4.2.2.2 | None | SRR6982115 | Sensitive | lineage4.3.2 | None | SRR16295775 | Other | lineage2.2.1 | None | SRR7236369 | Other | La1.8.1 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR12882669 | Sensitive | lineage3.1.1 | None | ERR2600576 | Pre-XDR-TB | lineage2.2.1 | None | SRR18391683 | Other | La1.7.1 | None | ERR3324351 | HR-TB | lineage4.1.4 | None | ERR7911622 | Pre-XDR-TB | lineage2.2.2 | None | SRR1915490 | Other | La1.2.BCG | None | SRR16295752 | Other | lineage2.2.1 | None | SRR7131236 | Other | lineage4.3.4.2 | None | SRR3675265 | Other | lineage4 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR6982328 | Sensitive | lineage3.1.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR1208238 | Other | lineage4.9 | None | SRR1208284 | Sensitive | lineage4.9 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | ERR2179857 | Sensitive | lineage4 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR3675552 | Other | lineage4.9 | None | SRR6046117 | Other | lineage4.9 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR7236374 | Other | La1.8.1 | None | ERR6198389 | Other | La1.2 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR6982398 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR1173421 | Other | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | SRR16295830 | Other | lineage2.2.1 | None | SRR6982070 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR7070369 | Other | lineage1.2.2.2 | None | SRR7131257 | Other | lineage6.3.1 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR4450956 | Other | La1.7.1 | None | SRR1202516 | Other | lineage4.9 | None | ERR10796618 | Other | lineage4.3.4.1 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR9786543 | Sensitive | lineage4.1.2.1 | None | SRR18002997 | Other | lineage2.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR11349175 | Other | lineage2.2.1 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | SRR11972407 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341430 | Other | lineage3 | None | SRR1209048 | Other | lineage4.9 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR6824357 | Pre-XDR-TB | lineage4.4.2 | None | ERR4769525 | Sensitive | lineage4.9 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6045516 | Other | lineage3.1.1 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR5341460 | Other | lineage3 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | ERR2229204 | Other | lineage4.8 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR16295824 | Other | lineage2.2.1 | None | ERR3559283 | HR-TB | lineage4.2.2 | None | SRR10808496 | Sensitive | lineage4.3.2 | None | ERR560439 | Other | lineage4.9 | None | SRR16295814 | Other | lineage2.2.1 | None | ERR3797043 | Sensitive | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR16295819 | Other | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR16295811 | Other | lineage2.2.1 | None | SRR16295807 | Other | lineage2.2.1 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR9117714 | Other | lineage3.1.2 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | ERR2179737 | HR-TB | lineage4.2.1 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR16295762 | Other | lineage2.2.1 | None | ERR2693238 | Sensitive | lineage4.9 | None | SRR7069137 | Other | lineage4.8 | None | ERR3804140 | Sensitive | lineage6.2.2 | None | SRR7070087 | Other | lineage4.8.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | ERR2229541 | Other | lineage4.8 | None | SRR16295812 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR1915483 | HR-TB | La1.2.BCG | None | SRR19576436 | Sensitive | lineage1.2.2.2 | None | ERR7801321 | Sensitive | lineage4.3.4.2.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR21240093 | Other | lineage4.1.2.1 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR6982414 | Sensitive | lineage4.9 | None | ERR4769393 | Sensitive | lineage4.9 | None | ERR3559276 | HR-TB | lineage4.2.2 | None | SRR15316102 | Other | lineage2.2.1.1 | None | SRR6982297 | Sensitive | lineage4.1.1.1;lineage4.9 | None | ERR4769503 | Other | La1.2 | None | SRR10315486 | MDR-TB | lineage2.2.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | ERR3261359 | Other | lineage4.9 | None | SRR16295801 | Other | lineage2.2.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | ERR4769507 | Sensitive | lineage4.9 | None | SRR21714045 | Other | lineage2.2.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | ERR560448 | HR-TB | La1.2.BCG;lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR911930 | Other | lineage4.8 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR560441 | Sensitive | La1.2.BCG;lineage4.9 | None | SRR6982195 | Sensitive | lineage4.4.1.1 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR16295777 | Other | lineage2.2.1 | None | SRR11349208 | MDR-TB | lineage2.2.1 | None | SRR10129717 | Sensitive | lineage4.3.3 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR16295763 | Other | lineage2.2.1 | None | ERR2228815 | Other | lineage4.8 | None | SRR5007155 | Sensitive | lineage4.1.2.1 | None | SRR1208872 | Sensitive | lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR6982410 | Sensitive | lineage4.8.1 | None | SRR1208439 | Sensitive | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR6982427 | Sensitive | lineage4.1.1.1 | None | SRR21764250 | Other | lineage4.9 | None | SRR3675452 | Other | lineage3 | None | SRR6982035 | Sensitive | lineage4.3.2.1;lineage4.9 | None | SRR7240506 | Other | La1.8.1 | None | SRR10123881 | Sensitive | lineage4.1.4 | None | SRR6046764 | Other | lineage4.2.2 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | ERR4188255 | Sensitive | lineage4.9 | None | ERR867555 | Other | lineage3 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4627392 | Other | La1.8.1 | None | SRR6982508 | Sensitive | lineage4.9 | None | ERR4863405 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None | SRR6045267 | RR-TB | lineage4.8 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR4769506 | Sensitive | lineage4.9 | None | ERR867574 | Other | lineage4.9 | None | SRR16295744 | Other | lineage2.2.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR7070535 | HR-TB | lineage4.1.2.1 | None | ERR2228838 | Other | lineage4.8 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | SRR6982066 | Other | lineage4.3.2.1 | None | ERR867567 | RR-TB | lineage3 | None | SRR16295813 | Other | lineage2.2.1 | None | SRR16295826 | Other | lineage2.2.1 | None | ERR978762 | Other | lineage4.8 | None | SRR6982048 | Sensitive | lineage4.3.2.1 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR16295750 | Other | lineage2.2.1 | None | ERR1063855 | Other | lineage4.9 | None | SRR1202419 | Other | lineage4.9 | None | ERR978748 | Other | lineage4.8 | None | SRR10129718 | Sensitive | lineage4.3.3 | None | SRR11349196 | MDR-TB | lineage2.2.1 | None | SRR6981962 | Sensitive | lineage4.3.2.1 | None | SRR6982205 | Sensitive | lineage1.2.2.1 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR1208334 | Other | lineage4.9 | None | SRR1208763 | Other | lineage4.9 | None | SRR10129358 | Sensitive | lineage4.3.4.2 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR7070293 | Other | lineage4.8 | None | SRR3675245 | Other | lineage4.1.2.1 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | SRR6982227 | Sensitive | lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | SRR11342688 | Other | lineage4.2.2.2 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046246 | Other | lineage3 | None | SRR16295779 | Other | lineage2.2.1 | None | ERR3559275 | HR-TB | lineage4.2.2 | None | ERR1665403 | MDR-TB | lineage2.2.1 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR1202740 | Other | lineage4.9 | None | SRR12062542 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | ERR4772230 | Other | La1.2 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6045496 | Other | lineage6.1.3 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | SRR6397815 | Other | lineage4.4.1.1 | None | SRR6046359 | Other | lineage4.7 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR12199472 | Sensitive | lineage1.1 | None | SRR6982257 | Sensitive | lineage4.1.2.1 | None |
|---|
