EBG00000313339 - n.1892T>C


Drug resistance types
2 Sensitive 23 RR-TB 4 HR-TB 30 MDR-TB 7 Pre-XDR-TB 0 XDR-TB 66 Other
lineage Counts
lineage Count
lineage4.3.4.2 1
lineage4.2.2.2 2
lineage4.1.1.1 2
lineage4.9 47
lineage4.3.3;lineage4.8 2
lineage2.2.1 16
La2 1
lineage4.3.4.2.1 8
lineage4.2.1 4
lineage3;lineage4 1
lineage4.8 9
lineage3 2
lineage3.1.1 1
lineage4.1.1.3 3
lineage1.2.1.1 1
lineage4.3.3 3
lineage4.3.4.1 2
lineage4.1.2.1 3
lineage4.6.1.2 4
lineage4.7 1
lineage4.1.2.1;lineage4.9 1
lineage3.1.1;lineage4.9 1
lineage2.2.2 1
lineage4.4.1.1 1
lineage4.1.2.1;lineage4.4.1.1 1
lineage4.6.2.2 1
lineage4.4.1.1.1 2
lineage4.8.1 2
La1.6 1
lineage2.2;lineage4 1
lineage4.1.3 1
lineage4.3;lineage4.9 1
lineage4.3.2.1 1
lineage4.6.1.1 1
La1.7.X-unk4 1
lineage4.1.2 1
lineage4.1.2.1;lineage4.4.1 1
spoligotype Counts
spoligotype Count
None 132
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR10796633 Other lineage4.3.4.2 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR1183684 Other lineage4.9 None
SRR1049676 MDR-TB lineage4.3.3;lineage4.8 None
SRR7755645 Pre-XDR-TB lineage2.2.1 None
SRR1183190 Other lineage4.9 None
SRR13888750 Other La2 None
SRR7645901 MDR-TB lineage2.2.1 None
SRR10315567 HR-TB lineage2.2.1 None
ERR502473 RR-TB lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR7755649 MDR-TB lineage4.2.1 None
SRR1173740 Other lineage3;lineage4 None
SRR7131053 Other lineage2.2.1 None
SRR1181299 Other lineage4.9 None
ERR978767 RR-TB lineage4.8 None
ERR978766 RR-TB lineage4.8 None
ERR867567 RR-TB lineage3 None
ERR978767_ERR978765_ERR978766 RR-TB lineage4.8 None
SRR1173170 Other lineage4.9 None
SRR1173719 Other lineage4.9 None
ERR867538 Other lineage4.2.2.2 None
SRR1183531 Other lineage4.9 None
SRR1180024 Other lineage4.9 None
SRR1184329 Other lineage4.9 None
SRR1173310 Other lineage3.1.1 None
SRR1180446 Other lineage4.9 None
ERR1034647 MDR-TB lineage4.1.1.3 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR1175472 RR-TB lineage4.3.4.1 None
SRR1183438 Other lineage4.9 None
SRR7131123 Other lineage4.8 None
SRR1182954 Other lineage4.9 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
SRR5818647 Other lineage4.3.4.2.1 None
SRR1180686 Other lineage4.9 None
SRR1140736 Other lineage4.1.2.1 None
SRR7645972 MDR-TB lineage4.2.1 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR7645928 Other lineage4.7 None
ERR502478 RR-TB lineage4.9 None
SRR1182878 Other lineage4.9 None
SRR1181264 Sensitive lineage4.9 None
ERR4821286 Other lineage4.8 None
ERR867572 Other lineage4.9 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
ERR867570 RR-TB lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR171142 Other lineage3.1.1;lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR212114 Other lineage4.3.4.2.1 None
SRR11342698 RR-TB lineage4.4.1.1 None
ERR502474 RR-TB lineage4.9 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR9971112 HR-TB lineage2.2.1 None
SRR1181569 Other lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
SRR1173281 Other lineage3 None
ERR10796636 Other lineage4.1.2.1 None
ERR10796589 Other lineage4.9 None
ERR10796598 Other lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR1180687 Other lineage4.9 None
SRR11342676 HR-TB lineage4.6.2.2 None
ERR4819383 RR-TB lineage4.9 None
SRR6045957 Other lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
SRR1173770 Other lineage4.9 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
SRR1196478 Other lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR1183170 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR10993951 RR-TB La1.6 None
SRR1180440 Other lineage4.9 None
SRR1181256 Other lineage4.9 None
SRR7755688 Pre-XDR-TB lineage4.2.1 None
SRR11342669 Other lineage4.8 None
SAMEA3501073 RR-TB lineage4.8 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR867573 Other lineage4.9 None
SRR11342671 RR-TB lineage4.1.3 None
SRR11342651 MDR-TB lineage4.1.1.1 None
ERR970449 RR-TB lineage4.1.1.3 None
ERR036207 Other lineage4.3;lineage4.9 None
SRR1049677 MDR-TB lineage4.3.3;lineage4.8 None
SRR1182900 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7645906 Other lineage2.2.1 None
SRR7645899 Other lineage2.2.1 None
SRR1175474 Other lineage4.9 None
SRR11342693 MDR-TB lineage4.8.1 None
SRR1180094 Other lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR3445487 Other La1.7.X-unk4 None
SRR3619841 Pre-XDR-TB lineage2.2.1 None
SRR1181422 Other lineage4.9 None
SRR1183339 Other lineage4.9 None
SRR1181147 Other lineage4.9 None
SRR11342658 RR-TB lineage4.1.2 None
SRR1180047 Other lineage4.9 None
SRR1180087 Other lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR1173185 Other lineage4.9 None
SRR1183152 Other lineage4.9 None
ERR867571 Other lineage4.9 None
SRR1175491 MDR-TB lineage4.3.4.1 None
SRR1181580 Other lineage4.9 None
SRR1183281 Other lineage4.9 None
ERR867569 Other lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
ERR4820151 Other lineage4.8 None
SRR1181403 Other lineage4.9 None
SRR7645971 Other lineage2.2.1 None
SRR11349191 Pre-XDR-TB lineage4.3.3 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR502481 RR-TB lineage4.9 None
SRR7755655 Other lineage4.1.2.1 None