EBG00000313339 - n.1892T>C
Drug resistance types
2 Sensitive
23 RR-TB
4 HR-TB
30 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
66 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 9 |
| lineage2.2.1 | 16 |
| lineage4.9 | 47 |
| lineage4.6.1.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.6.1.2 | 4 |
| lineage3.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.3.3;lineage4.8 | 2 |
| lineage4.3.4.2.1 | 8 |
| lineage4.2.1 | 4 |
| lineage4.3.3 | 3 |
| lineage4.7 | 1 |
| lineage4.8.1 | 2 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage3 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| La1.6 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage2.2;lineage4 | 1 |
| lineage4.1.3 | 1 |
| La2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage3;lineage4 | 1 |
| lineage2.2.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.4.1.1.1 | 2 |
| La1.7.X-unk4 | 1 |
| lineage4.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 132 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR1180094 | Other | lineage4.9 | None | SRR3618864 | Pre-XDR-TB | lineage2.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR3619841 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181422 | Other | lineage4.9 | None | SRR1180024 | Other | lineage4.9 | None | SRR1183339 | Other | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1180687 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1173185 | Other | lineage4.9 | None | SRR1183152 | Other | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR867569 | Other | lineage4.9 | None | ERR4820151 | Other | lineage4.8 | None | SRR1183438 | Other | lineage4.9 | None | SRR11342669 | Other | lineage4.8 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR1049676 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR7645928 | Other | lineage4.7 | None | SRR1182900 | Sensitive | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | SRR7131053 | Other | lineage2.2.1 | None | SRR1181299 | Other | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR1181569 | Other | lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1173281 | Other | lineage3 | None | SRR1173719 | Other | lineage4.9 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR10796636 | Other | lineage4.1.2.1 | None | SRR1183531 | Other | lineage4.9 | None | SRR1184329 | Other | lineage4.9 | None | SRR1180087 | Other | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR1173770 | Other | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1196478 | Other | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR10993951 | RR-TB | La1.6 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7131123 | Other | lineage4.8 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR1183190 | Other | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR1180686 | Other | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR502473 | RR-TB | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR502474 | RR-TB | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR867567 | RR-TB | lineage3 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR1173170 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | ERR10796589 | Other | lineage4.9 | None | SRR1181147 | Other | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR1180047 | Other | lineage4.9 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | SRR6045957 | Other | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR1181580 | Other | lineage4.9 | None | SRR1183281 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1183170 | Other | lineage4.9 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1181403 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR1181256 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR1183684 | Other | lineage4.9 | None | SRR1182954 | Other | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR036207 | Other | lineage4.3;lineage4.9 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | SRR1049677 | MDR-TB | lineage4.3.3;lineage4.8 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR1182878 | Other | lineage4.9 | None | SRR1181264 | Sensitive | lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | ERR867572 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None |
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