EBG00000313339 - n.1858G>A
Drug resistance types
1 Sensitive
4 RR-TB
1 HR-TB
11 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1.1 | 1 |
| lineage4.9 | 7 |
| lineage4.3.4.2.1 | 1 |
| lineage2.2.1 | 8 |
| La2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.1.3 | 1 |
| lineage4.4.2 | 1 |
| lineage4.8.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.8 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.2.1 | 4 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 38 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR30182409 | Other | lineage1.1.1.1 | None | ERR10796589 | Other | lineage4.9 | None | ERR867569 | Other | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR867573 | Other | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342669 | Other | lineage4.8 | None | SRR7755655 | Other | lineage4.1.2.1 | None | SRR7755645 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755688 | Pre-XDR-TB | lineage4.2.1 | None | SRR7645901 | MDR-TB | lineage2.2.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR171142 | Other | lineage3.1.1;lineage4.9 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR867571 | Other | lineage4.9 | None | SRR7645972 | MDR-TB | lineage4.2.1 | None | SRR7645971 | Other | lineage2.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR7645899 | Other | lineage2.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | ERR037504 | Other | lineage4.9.1 | None | ERR10796598 | Other | lineage4.9 | None | SRR7755649 | MDR-TB | lineage4.2.1 | None | DRR188909 | Sensitive | lineage2.2.1 | None | SRR7645928 | Other | lineage4.7 | None | SRR7645906 | Other | lineage2.2.1 | None |
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