Rv1630 - c.819G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
20 Sensitive
24 RR-TB
8 HR-TB
16 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.8 | 8 |
| lineage2.2.1 | 11 |
| lineage4.1.2.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.8.1 | 1 |
| lineage4.3.2.1 | 1 |
| La2 | 1 |
| lineage3.1.2.1 | 3 |
| lineage4 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.3.3 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage4.9 | 20 |
| lineage4.6.1.1 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage2;lineage4 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage3 | 5 |
| lineage2.2.2 | 3 |
| lineage5.1.1 | 1 |
| lineage4.2.1 | 3 |
| lineage2.2.1.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage3;lineage4 | 1 |
| lineage4.3.1 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.3 | 1 |
| lineage4.1.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 89 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR13888750 | Other | La2 | None | ERR4816476 | Other | lineage3.1.2.1 | None | SRR1181349 | Sensitive | lineage4 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR14801652 | HR-TB | lineage4.3.3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR867567 | RR-TB | lineage3 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR751345 | Other | lineage5.1.1 | None | ERR2512606 | HR-TB | lineage3 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR7070223 | HR-TB | lineage3 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR4820266 | Sensitive | lineage3 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR4816852 | Other | lineage4.9 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR15315797 | RR-TB | lineage2.2.1;lineage4 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR7070195 | Sensitive | lineage3.1.2.1 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR3675552 | Other | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None |
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