EBG00000313325 - n.1469A>G
Drug resistance types
25 Sensitive
18 RR-TB
3 HR-TB
19 MDR-TB
8 Pre-XDR-TB
1 XDR-TB
34 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1.1 | 3 |
| lineage4.2.2.2 | 1 |
| lineage4.5 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.2 | 2 |
| lineage1.2.1.2 | 1 |
| lineage2.2.1 | 19 |
| lineage4.9 | 15 |
| lineage4.6.4 | 1 |
| lineage4.8.1 | 3 |
| lineage4.3.3 | 6 |
| lineage4.8 | 11 |
| La1.8.1 | 1 |
| lineage4.6.5 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1.1 | 2 |
| lineage4.1.2.1 | 3 |
| lineage4.3.1 | 6 |
| lineage1.1.3.1 | 1 |
| lineage3.1.1 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.6.2.2 | 2 |
| lineage2.2.2 | 3 |
| lineage4.6.1.2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage3 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| La1.7.X-unk4 | 1 |
| lineage4.3 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.3 | 1 |
| lineage6.1.2 | 1 |
| lineage4.8.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 108 |
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR21737226 | Sensitive | lineage4.5 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR10214505 | Sensitive | lineage1.2.1.2 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR10796576 | Sensitive | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR1679639 | Other | lineage4.6.4 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR7070320 | Other | lineage4.8 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | ERR4586795 | Other | La1.8.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR16156804 | Sensitive | lineage4.9 | None | ERR3283046 | Sensitive | lineage4.9 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR10796633 | Other | lineage4.3.4.2 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR8774355 | MDR-TB | lineage2.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | ERR2517389 | Sensitive | lineage4.3.1 | nl | SRR12199461 | Sensitive | lineage1.1.3.1 | None | ERR10796559 | Other | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4817398 | Other | lineage3.1.1 | None | ERR3797063 | Other | La3;lineage4.9 | None | SRR12420778 | Sensitive | lineage2.2.1 | None | ERR4822150 | Other | lineage4.8 | gb | SRR6045071 | Other | lineage4.3.1.1 | None | ERR551243 | Sensitive | lineage4.3.1 | de | SRR13180364 | Sensitive | lineage4.3.1 | None | ERR4817189 | Other | lineage4.7 | None | ERR6359064 | Sensitive | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR2512423 | Other | lineage4.1.1.3 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4818128 | Other | lineage4.1.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | ERR4816800 | Other | lineage4.8 | gb | ERR2660499 | Sensitive | lineage4.1.1.3 | None | ERR2446125 | Sensitive | lineage4.3.1 | nl | ERR3797065 | RR-TB | lineage4.9 | None | ERR867575 | Other | lineage4.9 | None | ERR4818050 | Sensitive | lineage4.6.2.2 | None | SRR11342682 | Other | lineage4.1.2 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | ERR3275286 | Sensitive | lineage4.3.1 | nl | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR7070293 | Other | lineage4.8 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR1193829 | Sensitive | lineage4.3.1 | ma | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR4796351 | Sensitive | lineage4.9 | None | ERR4812763 | Other | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR10796594 | Other | lineage4.9 | None | ERR2179695 | Sensitive | lineage4.5 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR867567 | RR-TB | lineage3 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR11342638 | MDR-TB | lineage4.4.1.1.1 | None | ERR3445487 | Other | La1.7.X-unk4 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR10796593 | Other | lineage4.3 | None | ERR323048 | Sensitive | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992784 | XDR-TB | lineage2.2.2 | None | ERR867522 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR10796628 | Other | lineage4.3.3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | ERR4769423 | Other | La1.3 | None | ERR9787033 | Sensitive | lineage6.1.2 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR867574 | Other | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR20969542 | Other | lineage4.4.2 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None |
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