EBG00000313339 - n.2484A>G
Drug resistance types
181 Sensitive
60 RR-TB
35 HR-TB
64 MDR-TB
29 Pre-XDR-TB
2 XDR-TB
390 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 82 |
| lineage2.2.1 | 146 |
| lineage4.3.4.1 | 8 |
| lineage4.1.1.3 | 11 |
| lineage4.1.4 | 2 |
| lineage4.6.2.2 | 6 |
| lineage1.1.3.2 | 4 |
| lineage4.1.2.1 | 33 |
| La1.8.1 | 40 |
| 20 | |
| lineage4 | 20 |
| lineage4.1.1 | 14 |
| lineage4;La1 | 1 |
| La1.8 | 1 |
| lineage4.9;La1.8 | 1 |
| La1 | 2 |
| La1.7.1 | 6 |
| La1.3 | 4 |
| La1.2 | 8 |
| lineage4.9;La1.3 | 1 |
| lineage2.2.2 | 8 |
| lineage4.2.1 | 5 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.8 | 50 |
| lineage1.1.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage4.6.5 | 3 |
| lineage4.2.2.2 | 4 |
| lineage3 | 40 |
| lineage3.1.2 | 6 |
| lineage4.3 | 2 |
| lineage1.2.2.2 | 7 |
| lineage3.1.1 | 11 |
| lineage4.3.2 | 3 |
| lineage4.3.1.1 | 4 |
| lineage1.1.1.1 | 1 |
| lineage4.8.2 | 2 |
| lineage4.6.1.1 | 5 |
| lineage4.4.1.1 | 21 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.3.3 | 26 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1.1 | 10 |
| lineage4.1.2 | 10 |
| lineage4.3.2.1 | 14 |
| La1.6 | 1 |
| lineage4.8.1 | 2 |
| lineage2.2 | 4 |
| lineage4.3.4 | 1 |
| lineage1.1.3 | 3 |
| lineage4.9;lineage4.4.2 | 1 |
| lineage1.1.2 | 9 |
| lineage1.1.3.1 | 1 |
| lineage1.1 | 1 |
| lineage4.3.4.2 | 5 |
| La1.4 | 2 |
| lineage2.2.2;lineage2.2.1 | 1 |
| lineage4.4.2 | 4 |
| lineage4.2.2 | 2 |
| lineage6 | 2 |
| lineage4.1.2;lineage3.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.3.4.2.1 | 9 |
| lineage1.2.1.2.1 | 3 |
| lineage2.2.1.2 | 1 |
| lineage4.5 | 6 |
| lineage4.7 | 9 |
| lineage4;lineage1.1.2 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage4.6.1 | 1 |
| lineage3.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.2 | 3 |
| lineage4.1.1.3.1 | 5 |
| lineage4;lineage3 | 2 |
| lineage4.3.3;lineage3 | 1 |
| lineage4;lineage3.1.2.1 | 1 |
| lineage4.1.1.3.1;lineage3.1.2 | 1 |
| La3 | 1 |
| lineage6.1.3 | 1 |
| lineage4.1.3 | 1 |
| lineage1.2.2.1 | 2 |
| lineage3.1.3 | 1 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage1.1.3.3 | 1 |
| lineage3.1.2.2 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage5.1.1 | 2 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.4 | 1 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.4.1 | 1 |
| lineage4.9;lineage4.3.4.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.9;La1.8.1 | 1 |
| lineage6.3.1 | 2 |
| lineage4.9;lineage1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 761 |
Geographic prevalence
Country level data for this variant is available for 27 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283043 | Other | lineage4.9 | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3324331 | MDR-TB | lineage4.3.4.1 | None | ERR3324329 | HR-TB | lineage4.1.1.3 | None | ERR3324351 | MDR-TB | lineage4.1.4 | None | ERR3324325 | MDR-TB | lineage4.6.2.2 | None | ERR3324375 | Other | lineage1.1.3.2 | None | ERR3324347 | Sensitive | lineage4.1.2.1 | None | ERR3324362 | HR-TB | lineage4.1.2.1 | None | ERR3797007 | Other | La1.8.1 | None | ERR3335798 | MDR-TB | lineage2.2.1 | None | ERR3468435 | Other | La1.8.1 | None | ERR3324373 | MDR-TB | lineage2.2.1 | None | ERR3468464 | Other | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR4132447 | HR-TB | lineage4 | None | ERR4024588 | Other | lineage4.1.1 | None | ERR4187720 | Other | La1.8.1 | None | ERR4178135 | Sensitive | lineage4.3.4.1 | None | ERR4178216 | Sensitive | lineage4.1.2.1 | None | ERR4187604 | RR-TB | La1.8.1 | None | ERR4187641 | Other | lineage4;La1 | None | ERR4187800 | Other | La1.8.1 | None | ERR4187921 | Other | None | ERR4187819 | Other | La1.8 | None | ERR4187916 | Other | La1.8.1 | None | ERR4188010 | Other | La1.8.1 | None | ERR4187965 | Other | La1.8.1 | None | ERR4187993 | Other | La1.8.1 | None | ERR4187995 | Other | La1.8.1 | None | ERR4188202 | Other | La1.8.1 | None | ERR4188021 | Other | La1.8.1 | None | ERR4188035 | Other | La1.8.1 | None | ERR4188187 | Other | La1.8.1 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4188253 | Other | La1.8.1 | None | ERR4188254 | Other | La1.8.1 | None | ERR4188395 | Other | La1.8.1 | None | ERR4188352 | Other | La1.8.1 | None | ERR4188330 | Other | La1.8.1 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4188375 | Sensitive | lineage4.9 | None | ERR4188381 | Other | La1.8.1 | None | ERR4188396 | Sensitive | La1 | None | ERR4627392 | Other | La1.8.1 | None | ERR4627379 | Other | La1.8.1 | None | ERR4450956 | Other | La1.7.1 | None | ERR473278 | Sensitive | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4769424 | Sensitive | lineage4.9 | None | ERR4769412 | Sensitive | lineage4.9 | None | ERR4769404 | Other | La1.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769462 | Other | La1.3 | None | ERR4769429 | Other | lineage4.9 | None | ERR4769470 | Sensitive | lineage4.9 | None | ERR4769467 | Sensitive | lineage4.9 | None | ERR4769505 | Other | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4769482 | Sensitive | La1 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769503 | Other | La1.2 | None | ERR4769507 | Sensitive | lineage4.9 | None | ERR4769546 | Other | La1.3 | None | ERR4769527 | Sensitive | lineage4.9 | None | ERR4769547 | Sensitive | lineage4.9;La1.3 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769525 | Sensitive | lineage4.9 | None | ERR4769537 | Sensitive | lineage4.9 | None | ERR4772210 | Other | La1.2 | None | ERR4769549 | Sensitive | lineage4.9 | None | ERR4772230 | Other | La1.2 | None | ERR6052110 | Pre-XDR-TB | lineage2.2.2 | None | ERR5864322 | MDR-TB | lineage4.2.1 | None | ERR6052085 | Pre-XDR-TB | lineage2.2.2 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR5865118 | MDR-TB | lineage2.2.1 | None | ERR6197026 | RR-TB | lineage4.9 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR6197032 | Other | lineage4.9 | None | ERR6201843 | Other | La1.2 | None | ERR6197034 | Other | lineage4.9 | None | ERR6201802 | Other | La1.2 | None | ERR6865691 | Other | lineage4.1.1 | None | ERR6209443 | Other | La1.2 | None | ERR6358728 | MDR-TB | lineage4.6.1.2 | None | ERR6359064 | Sensitive | lineage4.9 | None | ERR6866821 | Sensitive | lineage4.1.2.1 | None | ERR6865773 | Sensitive | lineage4.1.2.1 | None | ERR6866186 | Sensitive | lineage4.8 | None | ERR6865839 | Sensitive | lineage4.3.4.1 | None | ERR718268 | Sensitive | lineage1.1.1 | None | ERR736816 | Other | lineage4.9 | None | ERR736805 | Sensitive | lineage2.2.1 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR736850 | Sensitive | lineage4.9 | None | ERR7737918 | MDR-TB | lineage4.2.2.1 | None | ERR751317 | Sensitive | lineage4.9 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR8025347 | Sensitive | lineage4.9 | None | ERR7911622 | Pre-XDR-TB | lineage2.2.2 | None | ERR9117676 | Other | lineage4.2.2.2 | None | ERR8774092 | Sensitive | lineage4.1.1.3 | None | ERR9117728 | Other | lineage3 | None | ERR9117675 | Other | lineage4.8 | None | ERR9117714 | Other | lineage3.1.2 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117695 | Other | lineage4.1.2.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117732 | Other | lineage1.2.2.2 | None | ERR9117740 | Other | lineage3.1.1 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117812 | Other | lineage4.3.1.1 | None | ERR9786008 | Sensitive | lineage1.1.1.1 | None | ERR9117841 | Other | lineage4.8.2 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9117842 | Sensitive | lineage3 | None | SRR1011488 | Other | lineage2.2.1 | None | SRR023450 | RR-TB | lineage2.2.1 | None | ERR9786498 | Sensitive | lineage4.1.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1002691 | HR-TB | lineage4.2.1 | None | SRR10315464 | MDR-TB | lineage4.4.1.1 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | SRR10315486 | MDR-TB | lineage2.2.1 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR10315603 | MDR-TB | lineage4.8 | None | SRR1049031 | HR-TB | lineage4.9 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR10482948 | Other | La1.8.1 | None | SRR10869051 | HR-TB | lineage2.2.1 | None | SRR10851730 | Other | lineage4.3.3 | None | SRR10808496 | Sensitive | lineage4.3.2 | None | SRR10869074 | Sensitive | lineage2.2.1.1 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR10869292 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342656 | MDR-TB | lineage2.2.1 | None | SRR10869086 | Pre-XDR-TB | lineage2.2.2 | None | SRR10869160 | Sensitive | lineage2.2.1.1 | None | SRR10869268 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10869302 | MDR-TB | lineage4.3.2.1 | None | SRR10993957 | Other | La1.6 | None | SRR11294512 | Other | La1.8.1 | None | SRR11342685 | HR-TB | lineage4.4.1.1 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR11349205 | MDR-TB | lineage2.2.1 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR11349187 | Pre-XDR-TB | lineage4.8.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR1140927 | Sensitive | lineage4.3.2.1 | None | SRR1181136 | Sensitive | lineage2.2 | None | SRR1173833 | Other | lineage4.9 | None | SRR1140942 | Other | None | SRR1173113 | RR-TB | lineage4.3.4 | None | SRR1173421 | RR-TB | lineage4.9 | None | SRR1181085 | Sensitive | lineage4.1.2 | None | SRR1181161 | Other | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR1184383 | Other | lineage4.9 | None | SRR1184379 | Other | lineage4 | None | SRR11972323 | RR-TB | lineage1.1.3.2 | None | SRR11871419 | Pre-XDR-TB | lineage2.2.1 | None | SRR1196582 | Other | lineage4.9 | None | SRR11972188 | MDR-TB | lineage2.2.1 | None | SRR11972283 | MDR-TB | lineage2.2.1 | None | SRR11972212 | MDR-TB | lineage2.2.1.1 | None | SRR12199387 | Other | lineage1.1.3 | None | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11972369 | Pre-XDR-TB | lineage2.2.1 | None | SRR11972387 | MDR-TB | lineage2.2.1 | None | SRR11972420 | MDR-TB | lineage2.2.1 | None | SRR12199410 | Sensitive | lineage1.1.3 | None | SRR12199468 | Sensitive | lineage4.9;lineage4.4.2 | None | SRR12199437 | Sensitive | lineage1.1.2 | None | SRR12199409 | Other | lineage1.2.2.2 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR13199739 | Other | La1.7.1 | None | SRR13199734 | Other | La1.2 | None | SRR12199472 | Sensitive | lineage1.1 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR12931719 | Other | lineage4.3.4.2 | None | SRR13423578 | Other | lineage2.2.1 | None | SRR13199746 | Other | La1.7.1 | None | SRR13583519 | MDR-TB | lineage4.1.2 | None | SRR13423629 | MDR-TB | lineage2.2.1 | None | SRR13423641 | MDR-TB | lineage2.2.1 | None | SRR14782096 | MDR-TB | lineage2.2.1 | None | SRR13861627 | Other | lineage4.9 | None | SRR14782537 | Pre-XDR-TB | lineage2.2.1 | None | SRR15399228 | Sensitive | lineage4.3.3 | None | SRR15316102 | Other | lineage2.2.1.1 | None | SRR15368751 | Sensitive | lineage2.2.1 | None | SRR14801688 | Sensitive | lineage4.3.3 | None | SRR15316084 | Other | lineage2.2.1 | None | SRR15368914 | MDR-TB | lineage2.2.1 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR15723110 | Sensitive | lineage2.2.1 | None | SRR16295746 | Other | lineage2.2.1 | None | SRR16295735 | Sensitive | lineage2.2.1 | None | SRR16295741 | Other | lineage2.2.1 | None | SRR16278273 | Other | La1.4 | None | SRR16278292 | Other | La1.4 | None | SRR16295743 | Other | lineage2.2.1 | None | SRR16295744 | Other | lineage2.2.1 | None | SRR16295752 | Other | lineage2.2.1 | None | SRR16295750 | Other | lineage2.2.1 | None | SRR16295758 | Other | lineage2.2.1 | None | SRR16295766 | Other | lineage2.2.1 | None | SRR16295762 | Other | lineage2.2.1 | None | SRR16295763 | Other | lineage2.2.1 | None | SRR16295738 | Other | lineage2.2.1 | None | SRR16295770 | Other | lineage2.2.1 | None | SRR16295771 | Other | lineage2.2.1 | None | SRR16295772 | Other | lineage2.2.1 | None | SRR16295779 | Other | lineage2.2.1 | None | SRR16295777 | Other | lineage2.2.1 | None | SRR16295775 | Other | lineage2.2.1 | None | SRR16295790 | Other | lineage2.2.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR16295732 | Other | lineage2.2.1 | None | SRR16295783 | Other | lineage2.2.1 | None | SRR16295791 | Other | lineage2.2.1 | None | SRR16295788 | Other | lineage2.2.1 | None | SRR16295789 | Other | lineage2.2.1 | None | SRR16295780 | Other | lineage2.2.1 | None | SRR16295787 | Other | lineage2.2.1 | None | SRR16295792 | Other | lineage2.2.1 | None | SRR16295801 | Other | lineage2.2.1 | None | SRR16295793 | Other | lineage2.2.1 | None | SRR16295807 | Other | lineage2.2.1 | None | SRR16295809 | Other | lineage2.2.1 | None | SRR16295808 | Other | lineage2.2.1 | None | SRR16295811 | Other | lineage2.2.1 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR16295802 | Other | lineage2.2.1 | None | SRR16295817 | Other | lineage2.2.1 | None | SRR16295806 | Other | lineage2.2.1 | None | SRR16295819 | Other | lineage2.2.1 | None | SRR16295812 | Other | lineage2.2.1 | None | SRR16295813 | Other | lineage2.2.1 | None | SRR16295829 | Other | lineage2.2.1 | None | SRR16295826 | Other | lineage2.2.1 | None | SRR16295830 | Other | lineage2.2.1 | None | SRR16295814 | Other | lineage2.2.1 | None | SRR17406750 | Other | lineage1.1.2 | None | SRR16295825 | Other | lineage2.2.1 | None | SRR16295824 | Other | lineage2.2.1 | None | SRR16295821 | Other | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1735585 | Sensitive | lineage3 | None | SRR17856664 | Sensitive | lineage3 | None | SRR1791909 | Other | La1.7.1 | None | SRR1791899 | HR-TB | La1.8.1 | None | SRR1792247 | Other | La1.7.1 | None | SRR1791940 | Other | La1.8.1 | None | SRR18002875 | MDR-TB | lineage2.2.2 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002876 | MDR-TB | lineage2.2.2;lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002902 | Other | lineage2.2.1 | None | SRR18002909 | MDR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | SRR18002908 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18002907 | MDR-TB | lineage2.2.1 | None | SRR18002932 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002995 | Other | lineage4.4.2 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR18002994 | MDR-TB | lineage4.2.2 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002997 | Other | lineage2.2.1 | None | SRR18003002 | MDR-TB | lineage2.2.1 | None | SRR18003038 | Other | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18149455 | Sensitive | lineage4.1.2.1 | None | SRR18149443 | Sensitive | lineage3 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | SRR18213721 | Other | lineage4.8 | None | SRR18391772 | Other | La1.7.1 | None | SRR18213726 | Other | lineage3 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18213800 | Other | lineage3.1.2 | None | SRR18911000 | Sensitive | lineage2.2.1 | None | SRR19304095 | Other | lineage4.1.2.1 | None | SRR18911138 | Other | lineage3 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR19304094 | Other | lineage6 | None | SRR19303907 | Other | lineage4.8 | None | SRR20969923 | Other | lineage2.2.1 | None | SRR19576436 | Sensitive | None | SRR21001883 | XDR-TB | lineage2.2.1 | None | SRR20969951 | Other | lineage4.4.2 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1 | None | SRR2101312 | MDR-TB | lineage2.2.1 | None | SRR2101505 | MDR-TB | lineage4.9.1 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR2101617 | Other | lineage4.1.1 | None | SRR2101684 | Other | lineage2.2.1.1 | None | SRR2101681 | Sensitive | lineage4.8 | None | SRR2101628 | Other | lineage4.3.2.1 | None | SRR2101663 | Other | lineage1.1.3.2 | None | SRR2101689 | Other | lineage4.3.4.1 | None | SRR2101685 | Sensitive | lineage4.9 | None | SRR2101711 | Sensitive | lineage2.2.1 | None | SRR2101693 | Sensitive | lineage4.1.2 | None | SRR2101773 | Sensitive | lineage4.3.4.2.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR2101786 | Sensitive | lineage4.4.1.1 | None | SRR2101803 | Sensitive | lineage4.3.3 | None | SRR21239778 | Sensitive | lineage4.3.3 | None | SRR21239825 | Sensitive | lineage4.3.4.2 | None | SRR2101816 | Other | lineage4.8 | None | SRR21675949 | Other | lineage4.3.3 | None | SRR21675637 | Sensitive | lineage4.3.3 | None | SRR21240038 | Other | lineage4.1.2.1 | None | SRR21676318 | Sensitive | lineage2.2.1 | None | SRR21714038 | Sensitive | lineage4.3.3 | None | SRR21685367 | MDR-TB | lineage2.2.1 | None | SRR21711124 | Other | lineage1.1.3 | None | SRR21676929 | Other | lineage1.2.1.2.1 | None | SRR21727761 | HR-TB | lineage2.2.1.2 | None | SRR21714045 | HR-TB | lineage2.2.1 | None | SRR21728726 | HR-TB | lineage1.2.1.2.1 | None | SRR21728339 | Other | lineage3 | None | SRR21728710 | Other | lineage4.1.1.3 | None | ERR2179785 | Sensitive | lineage4.5 | None | SRR21737226 | Sensitive | lineage4.5 | None | SRR22175227 | Pre-XDR-TB | lineage3 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SRR21764250 | Other | lineage4.9 | None | ERR2229577 | Sensitive | lineage4.8 | None | SRR8692776 | Other | lineage4.9 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | ERR190339 | Sensitive | lineage4.3.4.2.1 | None | ERR176780 | Sensitive | lineage4.9 | None | ERR4815171 | HR-TB | lineage1.1.2 | None | SRR3675491 | Other | lineage4.7 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR1198988 | Sensitive | lineage4.6.1.1 | None | ERR1665403 | MDR-TB | lineage2.2.1 | None | ERR181708 | RR-TB | lineage4;lineage1.1.2 | None | ERR4815419 | Other | lineage4.8 | None | ERR161184 | Sensitive | lineage4.3.4.2.1 | None | SRR3675240 | Sensitive | None | ERR4815713 | Other | lineage4.1.2.1 | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814700 | Other | lineage4.3.3 | None | SRR3675256 | Other | lineage4.7 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR176450 | Sensitive | lineage4.1.1 | None | ERR176547 | Sensitive | lineage4.6.1.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | SRR3675288 | Other | lineage3 | None | ERR2179857 | RR-TB | lineage4 | None | SRR3675452 | Other | lineage3 | None | ERR4815837 | Other | lineage4.1.4 | gb | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | ERR2228965 | Other | lineage4.8 | None | ERR2229033 | Other | lineage4.8 | None | ERR2229541 | Other | lineage4.8 | None | ERR2229810 | Other | lineage4.8 | None | SAMEA3501015 | Other | lineage4.8 | None | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | ERR2027250 | Other | lineage3.1.2 | None | ERR4816129 | HR-TB | lineage4.6.2.2 | gb | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027255 | HR-TB | lineage4.4.1.1 | None | ERR2027256 | Other | lineage4.1.2 | None | ERR1199039 | Sensitive | lineage4.6.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2229733 | Other | lineage4.8 | dk | ERR4816227 | RR-TB | lineage3 | None | ERR4816182 | Other | lineage3.1.2.1 | gb | SRR3675552 | RR-TB | lineage4.9 | None | SRR3675565 | Other | lineage3 | None | ERR4817060 | RR-TB | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR2229147 | Other | lineage4.8 | None | ERR2229204 | Other | lineage4.8 | None | ERR2041685 | MDR-TB | lineage2.2.1 | None | ERR2229811 | Other | lineage4.8 | dk | ERR2179850 | Sensitive | lineage4 | None | ERR2229358 | Other | lineage4.8 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR2229366 | Other | lineage4.8 | None | ERR2228810 | RR-TB | lineage4 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR2228813 | Other | lineage4.8 | None | ERR2228815 | RR-TB | lineage4.8 | None | ERR4816866 | Other | lineage2.2.1 | None | ERR2228859 | RR-TB | lineage4 | None | ERR4816883 | Other | lineage4.5 | None | ERR2228838 | RR-TB | lineage4.8 | None | ERR4815816 | Other | lineage4.5 | gb | ERR2228873 | Other | lineage4.8 | None | ERR2228890 | Other | lineage4 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2179737 | HR-TB | lineage4.2 | None | ERR2228899 | RR-TB | lineage4.8 | None | ERR2228910 | Other | lineage4.8 | None | ERR4817987 | Other | lineage4.7 | None | SAMEA3450033 | Other | lineage4.8 | None | ERR4818013 | Other | lineage4.3.3 | gb | ERR4818766 | Other | lineage3 | gb | ERR1199007 | Sensitive | lineage4.6.1.1 | None | ERR2512423 | Other | lineage4.1.1.3 | None | ERR4819073 | Other | lineage4.1.2.1 | None | SRR5074094 | HR-TB | lineage2.2.1.1 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR245740 | Sensitive | lineage4.1.2 | None | ERR2179695 | Sensitive | lineage4.5 | None | ERR1199001 | Sensitive | lineage4.6.1.1 | None | ERR245790 | Sensitive | None | ERR4818570 | Other | lineage4.3.3 | None | SRR5067459 | HR-TB | lineage4.2 | None | ERR4818355 | Other | lineage3 | None | SRR5007155 | HR-TB | lineage4.1.2.1 | None | ERR4818574 | Other | lineage6 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR2513300 | Sensitive | lineage4.1.1 | gb | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007180 | Other | None | ERR4817561 | Other | lineage4.7 | gb | ERR4817569 | Other | lineage4.3.4.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR5149238 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818629 | Other | lineage4.3.3;lineage3 | gb | ERR4819491 | Other | lineage4.1.2.1 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4819224 | Other | lineage1.2.1.2.1 | None | SRR5341460 | Other | lineage3 | None | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR4820348 | Other | lineage4.1.2.1 | None | ERR4819131 | Other | lineage4 | None | SAMN02350446 | Sensitive | lineage2.2.1 | None | ERR2514173 | Other | lineage4.5 | gb | SRR5341430 | Other | lineage3 | None | ERR2514430 | Other | lineage4.1.1.3.1;lineage3.1.2 | None | ERR4820543 | Other | La3 | None | ERR4819844 | Other | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR4820187 | Other | lineage4.3.3 | None | ERR4819980 | Other | lineage4.1.2.1 | None | ERR4819962 | Other | lineage4.4.1.1 | None | ERR4821796 | Other | lineage4.1.1 | None | ERR4821769 | Other | lineage4.1.2.1 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR4820922 | Other | lineage4.1.2.1 | gb | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR6045422 | Other | lineage4.3.1.1 | None | SRR6045445 | Other | lineage4.3.1.1 | None | SRR6045496 | Other | lineage6.1.3 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | SRR5486086 | Other | La1.2 | None | SRR6045464 | Other | lineage4.1.1.3 | None | ERR2660495 | Sensitive | lineage1.2.2.2 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4821198 | Other | lineage3 | gb | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4821373 | HR-TB | lineage4.1.2.1 | None | ERR2660505 | Other | lineage1.2.2.1 | None | SRR6045614 | Other | lineage4.8 | None | ERR4822240 | Other | lineage4.1.2.1 | gb | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045613 | Other | lineage3.1.3 | None | ERR4822170 | Other | lineage4.1.1.3 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045683 | Other | lineage3.1.2 | None | SRR6045618 | Other | lineage3.1.2 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045726 | Other | lineage3 | None | SRR6045743 | Other | lineage3 | None | SRR5818591 | Other | lineage4.2.2.2 | dj | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6045749 | Other | lineage4.1.1 | gb | SRR6046210 | Other | lineage4 | None | SRR6044817 | Other | lineage3 | None | SRR5818683 | Sensitive | lineage3.1.1 | dj | SRR6045849 | Other | lineage4.4.1.1 | None | SRR6045894 | Other | lineage4.8 | None | SRR6045928 | Other | lineage4.9 | None | SRR6045909 | Other | lineage4.8 | None | SRR6044888 | Other | lineage4.1.1.3.1 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044841 | Other | lineage4.9 | None | SRR6044873 | Other | lineage4.1.1.3.1 | None | SRR6045925 | Other | lineage4.2 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6044936 | Other | lineage4 | None | SRR6044925 | Sensitive | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044958 | Other | lineage4.4.1.1 | None | SRR6045036 | Other | lineage4;lineage3 | None | SRR6044993 | Other | lineage3 | None | SRR6045124 | Other | lineage4.9 | None | SRR6045071 | Other | lineage4.3.1.1 | None | SRR6045986 | Other | lineage3 | None | SRR6045178 | Other | lineage3 | None | SRR6045138 | Other | lineage3.1.1 | None | SRR6046020 | Other | lineage3 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6046189 | Other | lineage4.8 | None | SRR6045261 | Other | lineage1.1.2 | gb | SRR6045199 | Other | lineage2.2.1 | None | SRR6045222 | Other | lineage4.1.2.1 | None | SRR6045267 | RR-TB | lineage4 | None | SRR1735629 | Other | lineage1.2.2.2 | gb | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045289 | Other | None | SRR6046291 | Other | lineage3 | None | SRR6046273 | Other | lineage3.1.2 | None | SRR6046246 | Other | lineage3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR6046359 | Other | lineage4.7 | None | ERR2851371 | Other | lineage4.9 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR2851354 | RR-TB | lineage4.9 | None | ERR2851359 | Other | lineage4.9 | None | SRR6046484 | Other | lineage1.2.2.2 | None | ERR4829208 | RR-TB | lineage4.8 | None | SRR6046456 | Other | lineage4.1.1.3.1 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046482 | HR-TB | None | SRR6046737 | Other | lineage4.9 | None | SRR6046541 | Other | lineage4.9 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046607 | Other | lineage3 | None | SRR6046634 | Other | lineage3 | gb | SRR6046646 | Other | lineage4.7 | gb | SRR6046729 | Other | None | SRR6046743 | Other | lineage3 | None | SRR6046818 | Other | lineage4.2.1 | gb | SRR6046739 | Other | lineage1.1.2 | None | SRR6046752 | Sensitive | lineage4.2.2.2 | None | SRR6046764 | Other | lineage4.2.2 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR6152980 | HR-TB | lineage4.8 | ca | SRR6046848 | Other | lineage4.6.5 | None | SRR6367397 | Other | lineage4.1.2.1 | None | SRR6397441 | Other | lineage4 | None | SRR6152899 | MDR-TB | lineage2.2.2 | ca | SRR6152986 | Other | lineage2.2.1 | None | SRR6397727 | Other | lineage4.2.1.1 | None | SRR6511600 | MDR-TB | lineage4.3.4.2 | None | SRR6397770 | Other | lineage4.7 | None | SRR6397733 | Other | lineage4.4.1.2 | None | SRR6257067 | HR-TB | lineage4.2.1 | None | SRR6397815 | Other | lineage4.4.1.1 | None | ERR502472 | Other | lineage4.6.2.2 | None | ERR3148546 | Other | lineage4.3.2 | None | SRR6982078 | Sensitive | None | ERR502482 | Sensitive | lineage4.9 | None | ERR502480 | Other | lineage5.1.1 | None | ERR502483 | Sensitive | lineage4.9 | None | ERR502484 | Sensitive | lineage4.9 | None | ERR502485 | Sensitive | lineage4.9 | None | ERR502493 | Sensitive | lineage4.9 | None | ERR502486 | Sensitive | lineage4.9 | None | ERR502490 | Sensitive | lineage4.9 | None | ERR502492 | Sensitive | lineage4.9 | None | SRR6856087 | Sensitive | lineage4 | None | ERR4863405 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR502497 | Sensitive | lineage4.9 | None | SRR6982484 | Sensitive | lineage3.1.1 | None | SRR6982410 | Other | lineage4.8.1 | None | SRR6982088 | Other | lineage4.1.1.2 | None | SRR6856094 | Other | lineage2.2.1 | None | SRR6982106 | Sensitive | lineage4.8 | None | SRR6896162 | Sensitive | lineage4.9 | None | SRR6982104 | Sensitive | lineage2.2.1 | None | SRR6896178 | Sensitive | lineage2.2.1 | None | SRR6856119 | Sensitive | lineage2.2.1 | None | SRR6982102 | Other | lineage2.2.1 | None | SRR6982139 | Sensitive | lineage4.9 | None | SRR6982115 | Sensitive | lineage4 | None | SRR6982138 | Sensitive | lineage4 | None | SRR6982140 | Other | lineage2.2 | None | SRR6982414 | Sensitive | lineage4.9 | None | SRR6982418 | Sensitive | lineage4.1.1.3 | None | SRR6896255 | Sensitive | lineage4.3.3 | None | SRR6785282 | Other | lineage4.3.3 | None | SRR6982148 | Sensitive | lineage2.2.1 | None | SRR6982508 | Sensitive | lineage4.9 | None | SRR6982168 | Sensitive | lineage4.4.1.1 | None | SRR6982419 | Other | lineage4.8 | None | SRR6785301 | Sensitive | lineage2.2.1 | None | SRR6896339 | MDR-TB | lineage2.2.1 | None | SRR6896340 | HR-TB | lineage4.4.1.1 | None | SRR6982430 | Other | lineage4.3.4.2.1 | None | SRR6982178 | Sensitive | lineage2.2 | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR6982427 | Sensitive | lineage4.1.1 | None | SRR6982195 | RR-TB | lineage4.4 | None | SRR6982196 | Sensitive | None | SRR6982205 | Sensitive | lineage1.2.2.1 | None | SRR6982275 | Other | lineage2.2.1 | None | SRR6982227 | Other | lineage4.1.1 | None | SRR6982257 | RR-TB | lineage4.1.2.1 | None | SRR6982213 | Sensitive | lineage4.3.2.1 | None | SRR6982229 | Sensitive | lineage2.2.1 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982272 | Sensitive | lineage4.9 | None | SRR6982328 | HR-TB | lineage3.1.1 | None | SRR6982297 | Sensitive | lineage4.1.1 | None | SRR6982313 | Sensitive | lineage4.3.4.2.1 | None | SRR6982465 | Sensitive | lineage4.3.4.2 | None | SRR6982334 | Sensitive | lineage4.4.1.1 | None | SRR6982337 | Sensitive | lineage4.7 | None | SRR6982332 | Sensitive | lineage4.4.1.1 | None | SRR6807688 | Pre-XDR-TB | lineage4.2.1 | None | SRR6981918 | Sensitive | lineage4.4.1 | None | SRR6982349 | Sensitive | lineage2.2.1 | None | SRR6982472 | Sensitive | lineage4.4.1.1 | None | SRR6981912 | Sensitive | None | SRR6824357 | Pre-XDR-TB | lineage4.4.2 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6981922 | Sensitive | lineage4.3.2.1 | None | SRR6981975 | Sensitive | lineage4.7 | None | SRR6982363 | Sensitive | lineage4.3.3 | None | SRR6981962 | Sensitive | None | SRR6981968 | Sensitive | lineage4.1.2 | None | SRR6982371 | Sensitive | lineage4.1.1 | None | SRR6982471 | Sensitive | lineage2.2.1 | None | SRR6981981 | Other | lineage4.3.3 | None | SRR6855851 | Sensitive | lineage4.3.4.2.1 | None | SRR6981977 | Sensitive | lineage2.2.1 | None | SRR6982383 | Other | lineage4.3.2.1 | None | SRR6981978 | Sensitive | lineage4.3.4.2.1 | None | SRR6981983 | Sensitive | lineage3.1.1 | None | SRR6981993 | Other | lineage4.3.2.1 | None | SRR6982385 | Sensitive | lineage4.1.2 | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6824572 | MDR-TB | lineage2.2.1 | None | SRR6982022 | Sensitive | lineage4.4.1.1 | None | SRR6982014 | Other | lineage4.1.1 | None | SRR6824603 | Sensitive | lineage4.4.2 | None | SRR6855917 | Other | lineage4.8 | None | SRR6855915 | Sensitive | lineage4.9 | None | SRR6982035 | Sensitive | lineage4.9 | None | SRR6982026 | Sensitive | lineage4.3.3 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | SRR6982037 | Sensitive | lineage4.1.1 | None | SRR6855963 | RR-TB | lineage2.2.1 | None | SRR6982043 | Sensitive | lineage4.4.1.1 | None | SRR6982048 | HR-TB | lineage4.3.2.1 | None | SRR6982398 | MDR-TB | lineage2.2 | None | SRR6982053 | Sensitive | lineage4.9;lineage4.3.4.1 | None | SRR6982050 | Sensitive | lineage4.3.4.1 | None | SRR6982066 | Other | lineage4.3.2.1 | None | SRR6982058 | HR-TB | lineage2.2.1 | None | SRR6982057 | Pre-XDR-TB | lineage4.3 | None | SRR6982405 | Sensitive | None | SRR6982075 | Sensitive | lineage3 | None | SRR6982070 | RR-TB | None | ERR5162118 | Other | La1.8.1 | None | SRR6982077 | MDR-TB | lineage4.3.2.1 | None | ERR5162108 | Other | La1.8.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | SRR6856032 | Sensitive | lineage2.2.1 | None | ERR5087606 | Other | La1.8.1 | None | SRR8073606 | Other | La1.8.1 | None | ERR5162133 | Other | La1.8.1 | None | SRR6982510 | Sensitive | lineage4;lineage2 | None | SRR6982558 | Other | lineage4.3.4.2 | None | SRR9971243 | Pre-XDR-TB | lineage4.3.3 | None | ERR5311076 | Other | La1.8.1 | None | ERR5311080 | Other | La1.8.1 | None | ERR5311086 | Sensitive | lineage4.9;La1.8.1 | None | ERR5311088 | Other | La1.8.1 | None | SRR6982509 | Sensitive | lineage4.3.2.1 | None | SRR6982514 | Sensitive | lineage4.3.3 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131123 | Other | lineage4.8 | None | SRR7516395 | MDR-TB | lineage2.2.1 | None | SRR7131122 | Other | lineage2.2.1 | None | SRR7131169 | Other | lineage4.1.2.1 | None | SRR7131201 | Other | lineage4.8 | None | SRR9971351 | RR-TB | lineage2.2.1 | None | SRR7131163 | Other | lineage2.2.1 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR8217919 | HR-TB | lineage2.2.1 | None | SRR7131257 | Other | lineage6.3.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR7131294 | Other | lineage6.3.1 | None | SRR9970983 | MDR-TB | lineage4.3.3 | None | SRR8600217 | Other | La1.8.1 | None | SRR8600049 | Other | La1.8.1 | None | SRR7585431 | Pre-XDR-TB | lineage3 | in | SRR9971147 | RR-TB | lineage2.2.1 | None | SRR8600288 | Other | La1.8.1 | None | SRR9971105 | XDR-TB | lineage4.4.1.1 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None | SRR7765062 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR323061 | Sensitive | lineage4.9 | None | SRR9217359 | MDR-TB | lineage1.1.2 | None | ERR036215 | Other | lineage4.8 | None | ERR017781 | Other | lineage3 | None | ERR019855 | Other | lineage3 | None | ERR10796553 | Other | lineage4.9;lineage1.1 | None | ERR037501 | Sensitive | lineage4.3.4.2.1 | None | ERR072033 | Sensitive | lineage3.1.2.2 | None | ERR1063855 | Other | lineage4 | None | ERR10219868 | Other | lineage4.1.2.1 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796592 | Other | lineage4 | None | ERR10796595 | Other | lineage4.9 | None | ERR10796594 | Other | lineage4.9 | None | ERR10796593 | RR-TB | lineage4 | None | ERR10796597 | Other | lineage4 | None | ERR3261389 | Other | lineage4.9 | None | ERR10796634 | Other | lineage4 | None | ERR1082134 | Sensitive | lineage5.1.1 | None | ERR3261359 | Other | lineage4.9 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR10796630 | HR-TB | None | ERR1144989 | Sensitive | lineage4.8 | None | ERR144568 | Pre-XDR-TB | None | ERR3261351 | Other | lineage4.9 | None | ERR3283028 | Other | None |
|---|
