lineage | Count |
---|---|
lineage4.1.2.1 | 3 |
lineage4.3.1 | 1 |
lineage2.2.1 | 10 |
lineage1.2.2 | 2 |
lineage4.3.4.2;lineage4.7 | 1 |
lineage4.3.3 | 4 |
lineage4.9 | 12 |
lineage4.1 | 1 |
lineage2.2.1.1 | 1 |
lineage2.2.2 | 4 |
lineage1.1.3 | 1 |
2 | |
lineage3.1.2.1 | 4 |
lineage4.1.1.3 | 2 |
lineage4.2.1.1 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.8.1 | 1 |
lineage3 | 7 |
lineage4.2.1.1;lineage4.3.3 | 1 |
lineage4.1.2 | 1 |
lineage4.2.2.2 | 1 |
lineage4.1.1.1 | 3 |
lineage4.8 | 5 |
lineage4.3.4.2 | 3 |
lineage4.7 | 1 |
lineage3.1.2.1;lineage4.9 | 1 |
lineage4.4.1.1.1 | 1 |
lineage3.1.1 | 1 |
lineage4.4.1.2 | 1 |
lineage3;lineage4.9 | 1 |
lineage4.3.2.1 | 2 |
lineage4.1.3 | 1 |
lineage3;lineage4 | 2 |
lineage4.3.4.2.1 | 1 |
lineage5 | 1 |
lineage4.4.1.1 | 2 |
lineage4.2.1 | 1 |
lineage4.3.4.1 | 1 |
lineage1.1.3.1 | 1 |
spoligotype | Count |
---|---|
None | 90 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR3276170 | Other | lineage4.1.2.1 | nl |
ERR4829039 | RR-TB | lineage4.3.1 | None |
SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4818988 | Other | lineage1.2.2 | None |
ERR6197021 | MDR-TB | lineage4.3.4.2;lineage4.7 | None |
SRR14801652 | HR-TB | lineage4.3.3 | None |
ERR10796598 | Other | lineage4.9 | None |
ERR4815502 | Other | lineage4.1 | None |
ERR4814896 | Other | lineage2.2.1.1 | None |
SRR11342664 | MDR-TB | lineage2.2.2 | None |
ERR4816093 | Other | lineage1.1.3 | None |
ERR4817069 | RR-TB | None | |
SRR19295647 | Sensitive | lineage4.9 | None |
SRR7070195 | Sensitive | lineage3.1.2.1 | None |
SRR18911231 | Sensitive | lineage4.1.1.3 | None |
ERR867570 | RR-TB | lineage4.9 | None |
ERR4815811 | Other | lineage4.2.1.1 | None |
ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None |
ERR4817964 | RR-TB | lineage4.1.2.1 | gb |
ERR4821214 | Other | lineage1.2.1.2.1 | None |
SRR11342662 | MDR-TB | lineage4.8.1 | None |
ERR4818556 | Sensitive | lineage3 | None |
ERR11252736 | Other | lineage4.9 | None |
ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None |
SRR11342658 | RR-TB | lineage4.1.2 | None |
SRR10315556 | Sensitive | lineage2.2.1 | None |
SRR10315558 | Sensitive | lineage2.2.1 | None |
SRR1062919 | HR-TB | lineage2.2.1 | None |
ERR4769554 | RR-TB | lineage4.9 | None |
SRR3675552 | Other | lineage4.9 | None |
SRR11342687 | RR-TB | lineage4.2.2.2 | None |
SRR11342642 | MDR-TB | lineage4.1.1.1 | None |
ERR4815709 | Sensitive | lineage4.1.2.1 | None |
ERR4818259 | RR-TB | lineage4.1.1.1 | None |
ERR5908124 | Other | lineage4.8 | None |
ERR10796620 | Other | lineage4.1.1.1 | None |
ERR867567 | RR-TB | lineage3 | None |
ERR6197043 | MDR-TB | lineage4.3.4.2 | None |
ERR6197035 | Sensitive | lineage4.7 | None |
ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None |
SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None |
ERR4820410 | RR-TB | lineage3.1.1 | None |
ERR126597 | HR-TB | lineage4.4.1.2 | None |
ERR4817584 | Other | lineage3;lineage4.9 | None |
ERR4818522 | Other | lineage3 | None |
ERR4819011 | Other | lineage3.1.2.1 | None |
ERR867573 | Other | lineage4.9 | None |
ERR4821222 | Other | lineage4.3.2.1 | None |
SRR1735598 | RR-TB | lineage4.9 | None |
ERR4817060 | Other | None | |
SRR11342671 | RR-TB | lineage4.1.3 | None |
SRR11342673 | RR-TB | lineage4.3.4.2 | None |
SRR1049674 | HR-TB | lineage2.2.1 | None |
SRR11349147 | RR-TB | lineage4.3.2.1 | None |
SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None |
SRR11342649 | MDR-TB | lineage4.3.3 | None |
ERR4816476 | Other | lineage3.1.2.1 | None |
ERR4818393 | RR-TB | lineage3;lineage4 | None |
ERR4820266 | Sensitive | lineage3 | None |
ERR867575 | Other | lineage4.9 | None |
SRR6045267 | RR-TB | lineage4.8 | None |
ERR4815901 | Other | lineage2.2.2 | None |
SRR5818647 | Other | lineage4.3.4.2.1 | None |
ERR4818126 | Other | lineage1.2.2 | None |
ERR4819706 | MDR-TB | lineage4.3.4.2 | None |
ERR4816967 | Other | lineage5 | None |
ERR4816425 | Other | lineage2.2.2 | None |
SRR18003047 | MDR-TB | lineage2.2.1 | None |
ERR9896153 | RR-TB | lineage4.4.1.1 | None |
SRR11342636 | MDR-TB | lineage4.3.3 | None |
ERR867541 | MDR-TB | lineage4.2.1 | None |
SRR6046376 | Other | lineage3 | None |
SRR1196545 | Sensitive | lineage4.9 | None |
ERR4819265 | HR-TB | lineage4.3.4.1 | None |
ERR1023509 | Other | lineage4.9 | None |
ERR9119120 | Other | lineage4.8 | None |
SRR11342647 | MDR-TB | lineage4.1.1.3 | None |
SRR9971122 | MDR-TB | lineage4.8 | None |
SRR1140724 | Other | lineage2.2.1 | None |
SRR1049675 | HR-TB | lineage2.2.1 | None |
SRR5007165 | Other | lineage3 | None |
ERR4816610 | Other | lineage4.3.3 | None |
ERR4819772 | Other | lineage1.1.3.1 | None |
SRR6046839 | Other | lineage4.9 | None |
ERR4829816 | RR-TB | lineage4.4.1.1 | None |
SRR7069800 | Other | lineage3.1.2.1 | None |
ERR2512986 | Other | lineage3 | None |
SRR11342686 | MDR-TB | lineage4.8 | None |
SRR3675230 | Other | lineage3;lineage4 | None |
ERR867523 | Pre-XDR-TB | lineage2.2.1 | None |