EBG00000313339 - n.485C>G
Drug resistance types
2 Sensitive
15 RR-TB
1 HR-TB
19 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 3 |
| La1.3 | 3 |
| lineage4.9 | 11 |
| lineage4.1.1.1 | 3 |
| lineage3 | 1 |
| lineage4.2.1 | 2 |
| lineage4.2.2.2 | 2 |
| La2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1 | 18 |
| lineage4.3.3 | 3 |
| lineage4.2.1.1 | 1 |
| La1;lineage4.9 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.1.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.4.2 | 2 |
| lineage2.2.2 | 3 |
| lineage4.6.1.1 | 1 |
| lineage4 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.8.1 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 68 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11342669 | Other | lineage4.8 | None | SRR7131123 | Other | lineage4.8 | None | ERR4769408 | Other | La1.3 | None | ERR867569 | Other | lineage4.9 | None | ERR10796620 | Other | lineage4.1.1.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR4769436 | Other | La1.3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR867538 | Other | lineage4.2.2.2 | None | SRR13888750 | Other | La2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342698 | RR-TB | lineage4.4.1.1 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11342640 | MDR-TB | lineage4.3.3 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18002874 | MDR-TB | lineage2.2.1 | None | ERR1023509 | Other | lineage4.9 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796589 | Other | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR11342691 | MDR-TB | lineage2.2.1 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR12062493 | Pre-XDR-TB | lineage4.4.2 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR18002974 | Other | lineage2.2.1 | None | SRR18002981 | Other | lineage2.2.1 | None | SRR18002984 | MDR-TB | lineage2.2.2 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR18003013 | Pre-XDR-TB | lineage4.4.2 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR10796598 | Other | lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR3675265 | Other | lineage4 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR16156188 | Sensitive | lineage4.9 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | ERR867572 | Other | lineage4.9 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003045 | Other | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18003012 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303907 | Other | lineage4.8 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4817069 | RR-TB | None | ERR4808964 | RR-TB | lineage2.2.1 | None |
|---|
