lineage | Count |
---|---|
lineage4.9 | 19 |
lineage4.1.1.1 | 2 |
lineage4.8 | 35 |
lineage4.6.1.2 | 5 |
lineage2.2.1 | 17 |
lineage3.1.2.1;lineage4.9 | 1 |
lineage4.5 | 1 |
lineage4.3.3 | 6 |
lineage4.4.2 | 1 |
lineage4.2.2.2 | 2 |
lineage4.8.2;lineage4.9 | 1 |
lineage4.4.1.1.1 | 2 |
lineage4.3.4.2;lineage4.7 | 1 |
lineage4.1.1.3 | 1 |
lineage4.6.2.2 | 1 |
lineage2;lineage4 | 1 |
lineage4.3.4.2.1 | 2 |
lineage2.2.2 | 1 |
2 | |
La1.2 | 1 |
lineage4.4.1.1 | 3 |
lineage4.3.4.2 | 1 |
lineage4.8.1 | 2 |
lineage3.1.1 | 1 |
lineage2.2.1.1 | 1 |
lineage4.2.1 | 3 |
lineage4.3.4.1 | 2 |
lineage4.1.1.3.1;lineage4.9 | 1 |
lineage4.1.2 | 2 |
lineage4.6.5 | 2 |
lineage4.1.2.1 | 1 |
lineage4.7 | 1 |
lineage4.8;lineage4.9 | 2 |
lineage4.1.1.3.1 | 1 |
lineage4.3.3;lineage4.9 | 1 |
La1.7.X-unk4 | 1 |
lineage4.1.1.2 | 1 |
lineage1.1.3.1 | 1 |
La1.4 | 1 |
lineage3 | 4 |
lineage3.1.2.1 | 1 |
lineage4.8.2 | 1 |
spoligotype | Count |
---|---|
None | 136 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR4769433 | RR-TB | lineage4.9 | None |
SRR11342651 | MDR-TB | lineage4.1.1.1 | None |
ERR978748 | Other | lineage4.8 | None |
ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None |
SRR1062880 | MDR-TB | lineage4.6.1.2 | None |
SRR11342660 | MDR-TB | lineage2.2.1 | None |
ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None |
ERR4815816 | Other | lineage4.5 | gb |
SRR11342636 | MDR-TB | lineage4.3.3 | None |
ERR867523 | Pre-XDR-TB | lineage2.2.1 | None |
SRR20969542 | Other | lineage4.4.2 | None |
SRR18003047 | MDR-TB | lineage2.2.1 | None |
SRR5818586 | RR-TB | lineage4.2.2.2 | None |
ERR4769493 | Other | lineage4.9 | None |
ERR978766 | RR-TB | lineage4.8 | None |
SRR5007168 | Other | lineage4.8.2;lineage4.9 | None |
SRR1180446 | Other | lineage4.9 | None |
SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None |
ERR6197021 | MDR-TB | lineage4.3.4.2;lineage4.7 | None |
SRR11342634 | MDR-TB | lineage4.8 | None |
SRR11342647 | MDR-TB | lineage4.1.1.3 | None |
SRR11342676 | HR-TB | lineage4.6.2.2 | None |
SRR9971112 | Other | lineage2.2.1 | None |
ERR1023502 | MDR-TB | lineage2;lineage4 | None |
ERR212114 | Other | lineage4.3.4.2.1 | None |
SRR11342655 | MDR-TB | lineage2.2.1 | None |
ERR978754 | RR-TB | lineage4.8 | None |
SRR11342664 | MDR-TB | lineage2.2.2 | None |
SAMEA3501070 | RR-TB | lineage4.8 | None |
SRR1735598 | RR-TB | lineage4.9 | None |
SAMEA3501067 | RR-TB | lineage4.8 | None |
SRR1049582 | MDR-TB | lineage4.6.1.2 | None |
ERR4817060 | Other | None | |
SRR9971046 | MDR-TB | lineage4.8 | None |
ERR4819910 | Sensitive | lineage4.9 | None |
ERR4769418 | Other | La1.2 | None |
ERR4818851 | RR-TB | lineage4.4.1.1 | None |
SRR11342673 | RR-TB | lineage4.3.4.2 | None |
SRR1181256 | Other | lineage4.9 | None |
SRR17567917 | RR-TB | lineage4.4.1.1 | None |
SRR11342693 | MDR-TB | lineage4.8.1 | None |
SRR1173310 | Other | lineage3.1.1 | None |
SRR1175474 | Other | lineage4.9 | None |
ERR4769530 | RR-TB | lineage4.9 | None |
SRR18002887 | MDR-TB | lineage2.2.1.1 | None |
ERR867570 | RR-TB | lineage4.9 | None |
ERR323044 | HR-TB | lineage4.3.4.2.1 | None |
SRR18002947 | MDR-TB | lineage2.2.1 | None |
ERR10762275 | MDR-TB | lineage4.2.1 | None |
SAMEA3501063 | RR-TB | lineage4.8 | None |
SRR11342662 | MDR-TB | lineage4.8.1 | None |
SRR1140712 | MDR-TB | lineage4.6.1.2 | None |
SRR1175472 | RR-TB | lineage4.3.4.1 | None |
SRR14782539 | MDR-TB | lineage4.2.1 | None |
SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None |
ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None |
ERR4822261 | RR-TB | lineage2.2.1 | None |
ERR978765 | RR-TB | lineage4.8 | None |
SRR11342658 | RR-TB | lineage4.1.2 | None |
ERR4821143 | Other | lineage4.9 | None |
SRR1238559 | Other | lineage4.9 | None |
ERR7801175 | HR-TB | lineage4.6.5 | None |
SAMEA3501073 | RR-TB | lineage4.8 | None |
SRR11342687 | RR-TB | lineage4.2.2.2 | None |
ERR978752 | Other | lineage4.8 | None |
SRR11342642 | MDR-TB | lineage4.1.1.1 | None |
ERR9029360 | MDR-TB | lineage2.2.1 | None |
ERR2027257 | Other | lineage4.1.2.1 | None |
ERR2229234 | Sensitive | lineage4.8 | None |
SRR11342682 | Other | lineage4.1.2 | None |
ERR987707 | MDR-TB | lineage4.7 | None |
SRR10315751 | MDR-TB | lineage4.8 | None |
ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None |
SAMN02380990 | MDR-TB | lineage4.6.1.2 | None |
ERR2228890 | Other | lineage4.8;lineage4.9 | None |
SRR16157123 | Other | lineage4.9 | None |
SRR11342653 | MDR-TB | lineage2.2.1 | None |
ERR4818583 | Other | lineage4.3.3 | None |
ERR978760 | RR-TB | lineage4.8 | None |
SRR1049581 | MDR-TB | lineage4.6.1.2 | None |
SRR18002967 | HR-TB | lineage2.2.1 | None |
ERR867541 | MDR-TB | lineage4.2.1 | None |
SRR5007193 | RR-TB | lineage4.1.1.3.1 | None |
ERR978767 | RR-TB | lineage4.8 | None |
SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None |
SRR7535086 | Other | None | |
ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None |
ERR978747 | Other | lineage4.8 | None |
ERR2228900 | Other | lineage4.8 | None |
SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None |
SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None |
SRR6832644 | Other | lineage4.3.3;lineage4.9 | None |
ERR3445487 | Other | La1.7.X-unk4 | None |
SRR16156697 | RR-TB | lineage2.2.1 | None |
SRR9971113 | Other | lineage2.2.1 | None |
ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None |
ERR8975044 | Other | lineage4.1.1.2 | None |
ERR978746 | RR-TB | lineage4.8 | None |
ERR502470 | RR-TB | lineage4.9 | None |
ERR4819864 | RR-TB | lineage1.1.3.1 | None |
SRR16278274 | Other | La1.4 | None |
ERR9992879 | XDR-TB | lineage4.3.3 | None |
SRR1183128 | Other | lineage4.9 | None |
SAMEA3501052 | RR-TB | lineage4.8 | None |
SRR1175491 | MDR-TB | lineage4.3.4.1 | None |
SRR5341365 | Pre-XDR-TB | lineage3 | None |
ERR017781 | Other | lineage3 | None |
ERR2228810 | Other | lineage4.8;lineage4.9 | None |
SRR023487 | RR-TB | lineage2.2.1 | None |
SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None |
ERR978751 | Other | lineage4.8 | None |
ERR978750 | RR-TB | lineage4.8 | None |
ERR978733 | RR-TB | lineage4.8 | None |
ERR978761 | Other | lineage4.8 | None |
ERR4769417 | Pre-XDR-TB | lineage4.9 | None |
ERR2228910 | Other | lineage4.8 | None |
ERR4815079 | RR-TB | lineage3 | None |
ERR4816610 | Other | lineage4.3.3 | None |
SRR11342649 | MDR-TB | lineage4.3.3 | None |
SRR18002941 | RR-TB | lineage2.2.1 | None |
SRR19303820 | RR-TB | lineage4.8 | None |
SRR1735596 | RR-TB | lineage4.9 | None |
ERR10796628 | Other | lineage4.3.3 | None |
ERR4815022 | Other | lineage3.1.2.1 | None |
ERR978726 | RR-TB | lineage4.8 | None |
ERR978756 | Other | lineage4.8 | None |
ERR7801176 | RR-TB | lineage4.6.5 | None |
ERR4821119 | Other | lineage4.4.1.1 | None |
ERR867575 | Other | lineage4.9 | None |
SRR5007169 | RR-TB | lineage4.8.2 | None |
ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None |
ERR2228838 | Other | lineage4.8 | None |
ERR4769508 | RR-TB | lineage4.9 | None |
SRR16156775 | Other | lineage4.9 | None |
ERR867567 | RR-TB | lineage3 | None |
SAMEA3501065 | RR-TB | lineage4.8 | None |