Rv0668 - p.Ala85Ser
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
2 Sensitive
49 RR-TB
4 HR-TB
32 MDR-TB
7 Pre-XDR-TB
1 XDR-TB
47 Other
lineage Counts
| lineage | Count |
|---|---|
| 2 | |
| lineage2.2.1 | 20 |
| lineage4.8 | 35 |
| lineage4.3.3 | 5 |
| lineage4.9 | 19 |
| lineage4.8.2 | 1 |
| lineage4.1.1.2 | 1 |
| La1.2 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.4.1.1.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2 | 3 |
| La1.4 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage3 | 5 |
| lineage3.1.2.1 | 1 |
| lineage4.6.5 | 2 |
| lineage4.2.1 | 3 |
| lineage4.1.2.1 | 1 |
| lineage4.3.4.2.1 | 2 |
| La1.3 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.8.1 | 2 |
| lineage4.1.1.1 | 2 |
| lineage4.4.1.1 | 3 |
| lineage2.2.1.1 | 1 |
| lineage4.3.3;lineage4.9 | 2 |
| lineage4.6.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.7 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.2.2.2 | 2 |
| lineage2.2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.3.4.2;lineage4.7 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 142 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4817060 | Other | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR978751 | Other | lineage4.8 | None | ERR978750 | RR-TB | lineage4.8 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR978752 | Other | lineage4.8 | None | ERR867575 | Other | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR8975044 | Other | lineage4.1.1.2 | None | ERR978748 | Other | lineage4.8 | None | ERR4769418 | Other | La1.2 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR2228890 | Other | lineage4.8;lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR9029360 | MDR-TB | lineage2.2.1 | None | SRR7535086 | Other | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR2228900 | Other | lineage4.8 | None | SRR1180446 | Other | lineage4.9 | None | SRR9971065 | RR-TB | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR978746 | RR-TB | lineage4.8 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR1181256 | Other | lineage4.9 | None | ERR2228810 | Other | lineage4.8;lineage4.9 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR023487 | RR-TB | lineage2.2.1 | None | SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4815079 | RR-TB | lineage3 | None | ERR4821143 | Other | lineage4.9 | None | SRR1238559 | Other | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR978726 | RR-TB | lineage4.8 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR2229234 | Sensitive | lineage4.8 | None | ERR2228838 | Other | lineage4.8 | None | ERR10762275 | MDR-TB | lineage4.2.1 | None | SRR16156775 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR4769436 | Other | La1.3 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR16157123 | Other | lineage4.9 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR978760 | RR-TB | lineage4.8 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | SRR17567917 | RR-TB | lineage4.4.1.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR6046376 | Other | lineage3 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4819910 | Sensitive | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR017781 | Other | lineage3 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR1173310 | Other | lineage3.1.1 | None | SRR1175474 | Other | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR978733 | RR-TB | lineage4.8 | None | ERR978761 | Other | lineage4.8 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR2228910 | Other | lineage4.8 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR978756 | Other | lineage4.8 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR4769508 | RR-TB | lineage4.9 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR212114 | Other | lineage4.3.4.2.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4821119 | Other | lineage4.4.1.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR11342634 | MDR-TB | lineage4.8 | None | SRR11342636 | MDR-TB | lineage4.3.3;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR14334194 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769493 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR978747 | Other | lineage4.8 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR6197021 | MDR-TB | lineage4.3.4.2;lineage4.7 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | SRR1183128 | Other | lineage4.9 | None | ERR978754 | RR-TB | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None |
|---|
