Rv0668 - c.1287C>G
Drug resistance types
19 Sensitive
18 RR-TB
51 HR-TB
15 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4 | 1 |
| lineage4.9 | 26 |
| lineage2.2.1 | 23 |
| La1.4 | 1 |
| lineage4.8 | 4 |
| lineage4.3.4 | 1 |
| lineage2.2.2 | 6 |
| 24 | |
| lineage3 | 8 |
| lineage4 | 5 |
| lineage1.2.1.1 | 1 |
| lineage4.1 | 2 |
| lineage4.3.4.2.1 | 3 |
| lineage2.2.1.1 | 3 |
| La1.8.2 | 1 |
| lineage4.1.2.1 | 4 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage1.2.1.2.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage1.1.1 | 2 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.1.2 | 1 |
| lineage1.1.2 | 1 |
| La1.8.1 | 2 |
| lineage4.3 | 1 |
| La1.3 | 1 |
| lineage4.5 | 2 |
| lineage4.6.1.1 | 2 |
| lineage2.2 | 6 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 146 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1172713 | MDR-TB | lineage4.4 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002950 | MDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR19303813 | HR-TB | lineage4.8 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR22424787 | Sensitive | lineage4.9 | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR181744 | HR-TB | None | SRR3675230 | RR-TB | lineage3 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | SRR3675280 | HR-TB | lineage4.9 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4814896 | Other | lineage2.2.1.1 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR4816133 | Other | La1.8.2 | None | ERR4815909 | Other | lineage4.8 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4817069 | RR-TB | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR4817832 | Sensitive | lineage1.2.1.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR2513405 | Other | lineage2.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR4817555 | RR-TB | lineage3 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4817554 | Other | lineage1.1.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | SRR5341456 | Other | None | ERR4820394 | Other | lineage4.3.4.2.1 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR1035138 | MDR-TB | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR2514655 | Sensitive | lineage3 | None | ERR4820817 | Other | lineage4.1.2.1 | None | ERR4821007 | RR-TB | lineage1.2.2.2 | None | ERR4819948 | Other | lineage4.4.1.1 | None | SRR5341330 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4822169 | Other | lineage4.1.1.3 | gb | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | ERR2679270 | HR-TB | lineage4.1.2 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046299 | HR-TB | None | SRR6046492 | Other | None | ERR4829208 | RR-TB | lineage4.8 | None | SRR6046482 | HR-TB | None | ERR4829333 | RR-TB | lineage4 | None | SRR6046737 | Other | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR9029360 | MDR-TB | lineage2.2.1 | None | ERR3283008 | Other | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797046 | HR-TB | None | ERR387051 | HR-TB | None | ERR400350 | Sensitive | lineage4.9 | None | ERR400443 | Sensitive | lineage1.2.1.2.1 | None | ERR4769517 | Other | La1.3 | None | ERR4796577 | MDR-TB | None | ERR4811493 | HR-TB | None | ERR752229 | Other | lineage4.5 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283043 | Other | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4797141 | Sensitive | lineage3 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | ERR9896144 | Other | lineage3 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013598 | HR-TB | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013599 | HR-TB | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013617 | MDR-TB | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048885 | MDR-TB | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048982 | HR-TB | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049041 | MDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR11462861 | Other | La1.8.1 | None |
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