EBG00000313339 - n.1277C>T
Drug resistance types
10 Sensitive
16 RR-TB
4 HR-TB
18 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
51 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.1.1 | 1 |
| lineage4.9 | 20 |
| lineage3 | 10 |
| lineage4.1.2.1 | 4 |
| lineage3.1 | 1 |
| lineage4.6.1.2 | 5 |
| lineage4.1.1.3.1 | 1 |
| lineage4.8 | 1 |
| lineage1.1.2 | 2 |
| lineage4 | 5 |
| lineage4.3.4.1 | 4 |
| lineage3.1.1 | 4 |
| 1 | |
| lineage4.7 | 1 |
| lineage4.3.1.1 | 1 |
| lineage2.2.1 | 19 |
| lineage4.4.1.1 | 2 |
| lineage4.6.5 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.3.3 | 4 |
| lineage4.4.2 | 1 |
| lineage4.3.2 | 2 |
| lineage4.3 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4 | 1 |
| La1.3 | 1 |
| lineage4.9;La1.3 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage2.2.2 | 4 |
| lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 105 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675230 | RR-TB | lineage3 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007165 | MDR-TB | lineage3 | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4820484 | Other | lineage4.8 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6044936 | Other | lineage4 | None | SRR6044841 | Other | lineage4.9 | None | ERR4822217 | Sensitive | lineage4.3.4.1 | None | SRR6044904 | Other | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045248 | Other | lineage3.1.1 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6046020 | Other | lineage3 | None | SRR6045289 | Other | None | SRR6046359 | Other | lineage4.7 | None | SRR6046246 | Other | lineage3 | None | SRR6046291 | Other | lineage3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6046463 | Other | lineage4.4.1.1 | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6046655 | Other | lineage4.1.2.1 | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR9971035 | RR-TB | lineage2.2.1 | None | SRR7131287 | Other | lineage2.2.1.1 | None | SRR9971246 | MDR-TB | lineage4.1.1.3 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR10796555 | Other | lineage4.1.2.1 | None | ERR10796563 | Other | lineage4.3.3 | None | SRR9971088 | RR-TB | lineage2.2.1 | None | ERR10796558 | Sensitive | lineage4 | None | ERR10796561 | Other | lineage4.3.2 | None | ERR10796562 | Other | lineage4.3.4.1 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796571 | Other | lineage4.9 | None | ERR10796577 | RR-TB | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1 | None | ERR10796618 | Other | lineage4.3.4.1 | None | ERR10796582 | HR-TB | lineage4.3 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796583 | Other | lineage2.2.1 | None | ERR10796627 | Other | lineage4 | None | ERR10796620 | Other | lineage4.1.1 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR10796628 | Other | lineage4.3.3 | None | ERR4769419 | Other | lineage4.9 | None | ERR10796635 | Other | lineage4 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR403375 | Sensitive | lineage3.1.1 | None | ERR4769495 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117788 | Other | lineage3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR11349172 | RR-TB | lineage4.3.2.1 | None | SRR1181161 | Other | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR15316476 | MDR-TB | lineage2.2.2 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR15368862 | MDR-TB | lineage2.2.2 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR18002930 | MDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002954 | Other | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR18003033 | Other | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002945 | RR-TB | lineage2.2.1 | None | SRR18003042 | Other | lineage2.2.1 | None | SRR18054779 | MDR-TB | lineage2.2.2 | None | SRR18213726 | Other | lineage3 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18913750 | Other | lineage2.2.1 | None | SRR19304094 | Other | lineage6 | None |
|---|
