EBG00000313339 - n.1277C>T


Drug resistance types
10 Sensitive 16 RR-TB 4 HR-TB 18 MDR-TB 6 Pre-XDR-TB 0 XDR-TB 51 Other
lineage Counts
lineage Count
lineage4.9 20
lineage3 10
lineage1.2.1.1 1
lineage4.1.2.1 4
lineage3.1 1
lineage4.6.1.2 5
lineage4.1.1.3.1 1
lineage4.8 1
lineage1.1.2 2
lineage4.3.4.1 4
lineage4 5
lineage3.1.1 4
1
lineage2.2.1 19
lineage4.7 1
lineage4.4.1.1 2
lineage4.3.1.1 1
lineage4.1.1.3 2
lineage4.6.5 1
lineage2.2.1.1 1
lineage4.4.2 1
lineage4.3.2 2
lineage4.3.3 4
lineage4.3 1
lineage4.1.1 1
lineage4.3.4 1
La1.3 1
lineage4.9;La1.3 1
lineage4.4.1.1.1 1
lineage4.3.2.1 1
lineage2.2.2 4
lineage6 1
spoligotype Counts
spoligotype Count
None 105
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675527 RR-TB lineage4.9 None
SRR3675230 RR-TB lineage3 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR2027290 RR-TB lineage3.1 None
SRR3675552 RR-TB lineage4.9 None
ERR2027257 Other lineage4.1.2.1 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR6044841 Other lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007165 MDR-TB lineage3 None
SRR5007170 RR-TB lineage4.9 None
ERR4820484 Other lineage4.8 None
SRR6045424 Other lineage1.1.2 None
SRR6046117 RR-TB lineage4.9 None
ERR4822217 Sensitive lineage4.3.4.1 None
SRR6044904 Other lineage3 None
SRR6044936 Other lineage4 None
SRR6046291 Other lineage3 None
SRR6044983 Other lineage3.1.1 None
SRR6045125 Other lineage1.1.2 None
SRR6046020 Other lineage3 None
SRR6046246 Other lineage3 None
SRR6045248 Other lineage3.1.1 None
SRR6045267 RR-TB lineage4 None
SRR6045289 Other None
SRR6046343 Other lineage2.2.1 None
SRR6046359 Other lineage4.7 None
SRR6046463 Other lineage4.4.1.1 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046655 Other lineage4.1.2.1 None
SRR6046616 Other lineage4.3.1.1 None
SRR9971246 MDR-TB lineage4.1.1.3 None
SRR6046815 Other lineage3 None
SRR6046766 Other lineage3.1.1 None
SRR6046848 Other lineage4.6.5 None
SRR7131287 Other lineage2.2.1.1 None
SRR9971088 RR-TB lineage2.2.1 None
SRR9971035 RR-TB lineage2.2.1 None
ERR10796555 Other lineage4.1.2.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
ERR10796558 Sensitive lineage4 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796561 Other lineage4.3.2 None
ERR10796577 RR-TB lineage4.9 None
ERR10796563 Other lineage4.3.3 None
ERR10796564 Other lineage4.3.3 None
ERR10796571 Other lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796598 RR-TB lineage4.9 None
ERR10796582 HR-TB lineage4.3 None
ERR10796578 Other lineage2.2.1 None
ERR10796583 Other lineage2.2.1 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796627 Other lineage4 None
ERR10796620 Other lineage4.1.1 None
ERR3283033 Sensitive lineage4.9 None
ERR10796635 Other lineage4 None
ERR10796628 Other lineage4.3.3 None
ERR10796631 Other lineage4.3.4 None
SRR10315556 Sensitive lineage2.2.1 None
ERR403375 Sensitive lineage3.1.1 None
ERR4769419 Other lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769495 Other La1.3 None
ERR9117805 Other lineage4.3.2 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR9117788 Other lineage3 None
SRR10315707 MDR-TB lineage4.4.1.1.1 None
SRR10315558 Sensitive lineage2.2.1 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR11349172 RR-TB lineage4.3.2.1 None
SRR1173385 Sensitive lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR1181161 Other lineage4.9 None
SRR1181250 Other lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1180252 Other lineage4.9 None
SRR15368862 MDR-TB lineage2.2.2 None
SRR1196545 HR-TB lineage4.9 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR15316476 MDR-TB lineage2.2.2 None
SRR16156188 HR-TB lineage4.9 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18002954 Other lineage2.2.1 None
SRR18213736 MDR-TB lineage3 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18054779 MDR-TB lineage2.2.2 None
SRR18213726 Other lineage3 None
SRR18003033 Other lineage2.2.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR19304094 Other lineage6 None
SRR18913750 Other lineage2.2.1 None