EBG00000313339 - n.529A>G


Drug resistance types
121 Sensitive 34 RR-TB 79 HR-TB 30 MDR-TB 14 Pre-XDR-TB 0 XDR-TB 133 Other
lineage Counts
lineage Count
lineage4.1.4 1
lineage4.4.1.1 1
lineage3.1.2.2 1
lineage5.2 2
lineage4.9 95
lineage4 74
lineage4.6.5 3
44
lineage2.2.1 38
lineage4.6 1
lineage2.2.1.1 1
lineage4.1.1.3 4
lineage1.1.3.1 2
lineage4.3.3 7
lineage4.1 1
lineage3 15
lineage4.7 3
lineage4.8 26
lineage4.3.4.2 3
lineage4.1.2.1 10
lineage4.6.1.1 1
lineage4.1.2 5
lineage4.3.2.1 1
La1.8.1 2
lineage4.8.1 1
lineage4.4.1.2 1
lineage4.3.4.2.1 6
lineage2.2 3
lineage4.9;lineage4.1 1
lineage4.9;lineage1.1 1
lineage4.3.4.1 3
lineage4.3.4 2
lineage4;lineage3.1 1
La1.3 7
lineage4.9;La1.3 1
lineage1.1.3.2 1
lineage1.1.2 4
lineage2.2.2 1
lineage4.5;lineage2.2.1 1
lineage4.3.2 1
lineage1.2.2.2 4
lineage5.1.1 1
lineage1.1.1 1
lineage4.3.1.1 1
lineage6.1.3 1
lineage6 2
lineage4.4.1.1.1 2
lineage4.2.2.2 2
lineage4.6.1 2
lineage4.9;lineage2.2 1
lineage2 1
lineage4.2.1 1
La1.7.1 1
lineage4.6.2.2 2
lineage4.4.2 1
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage2.1 2
lineage4.2.2 1
lineage3.1 1
lineage4.5 1
lineage3.1.3 2
lineage1 1
lineage4.1.1.3.1;lineage3.1.2 1
lineage3.1.1 1
lineage4.1.1.3.1 1
spoligotype Counts
spoligotype Count
None 411
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4828806 Other lineage4.1.4 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046440 Other lineage3.1.2.2 None
ERR4872077 Pre-XDR-TB lineage5.2 None
SRR6046839 Other lineage4.9 None
ERR323037 HR-TB lineage4 None
SRR6046848 Other lineage4.6.5 None
SRR6511621 HR-TB None
ERR485006 HR-TB lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4872193 MDR-TB lineage4.6 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR6797751 MDR-TB lineage2.2.1 None
ERR4831657 MDR-TB lineage2.2.1 None
SRR6982239 HR-TB lineage4.1.1.3 None
SRR6797423 Sensitive lineage1.1.3.1 None
SRR6785282 Other lineage4.3.3 None
SRR6789624 MDR-TB lineage4.1 None
SRR6964650 Sensitive lineage3 None
SRR7496523 Other lineage4.7 None
SRR7131075 Other lineage4.8 None
SRR7131123 Other lineage4.8 None
SRR9971270 RR-TB lineage2.2.1 None
SRR7131236 Other lineage4.3.4.2 None
SRR7131296 Other lineage4.3.3 None
SRR7496471 Sensitive None
SRR6855695 Sensitive lineage4.8 None
ERR502510 Sensitive lineage4 None
SRR7131216 Other lineage4.1.2.1 None
SRR7535082 Sensitive lineage4 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR9970978 Sensitive lineage4.1.2 None
ERR323107 Other lineage4 None
SRR9970979 Sensitive lineage4.8 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR8600288 Other La1.8.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
ERR323045 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323066 Sensitive lineage4 None
ERR323061 Sensitive lineage4.9 None
ERR323108 HR-TB lineage4 None
ERR019855 Other lineage3 None
ERR017781 Other lineage3 None
ERR1034634 HR-TB None
ERR323085 Sensitive lineage4 None
ERR037234 Sensitive lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR067699 HR-TB lineage4 None
ERR1035122 Sensitive None
ERR1063858 HR-TB None
ERR11465235 Sensitive lineage4.3.4.2.1 None
ERR1063855 Other lineage4 None
ERR1063857 HR-TB None
ERR1063839 HR-TB lineage2.2 None
ERR1063862 HR-TB None
ERR1063859 HR-TB None
ERR1063896 Sensitive None
ERR1063883 Sensitive lineage4 None
ERR10796560 MDR-TB lineage4.9;lineage4.1 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796564 Other lineage4.3.3 None
ERR10796568 Other lineage4.9 None
ERR10796577 RR-TB lineage4.9 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796589 Other lineage4.9 None
ERR10796592 Other lineage4 None
ERR10796581 HR-TB lineage4.1.2 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR10796634 Other lineage4 None
ERR10796627 Other lineage4 None
ERR10796626 Other lineage4.1.2 None
ERR10796631 Other lineage4.3.4 None
ERR11465628 Sensitive lineage4.3.4.2.1 None
ERR108471 HR-TB lineage4 None
ERR10796635 Other lineage4 None
ERR137286 Sensitive lineage4 None
ERR133825 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR323115 Sensitive lineage4 None
ERR3283030 HR-TB lineage4.9 None
ERR3283013 MDR-TB lineage4 None
ERR3283021 HR-TB None
ERR3283040 HR-TB None
ERR3283032 HR-TB None
ERR3445502 HR-TB lineage4 None
ERR3283046 MDR-TB lineage4.9 None
ERR3445501 HR-TB None
ERR3797047 HR-TB lineage4 None
ERR3797015 HR-TB None
ERR3445503 HR-TB None
ERR3797063 HR-TB None
ERR4596910 Sensitive lineage4 None
ERR4024991 Other None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4188247 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR405209 Sensitive lineage4 None
ERR473332 Other lineage4 None
ERR473303 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR473334 HR-TB lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR4769408 Other La1.3 None
ERR4769436 Other La1.3 None
ERR4769552 Other La1.3 None
ERR4769444 HR-TB lineage4.9 None
ERR4769514 Other La1.3 None
ERR4769474 HR-TB lineage4 None
ERR4769506 Sensitive La1.3 None
ERR4769516 Other La1.3 None
ERR4769521 HR-TB None
ERR4769550 Other lineage4.9;La1.3 None
ERR4796929 Sensitive lineage4 None
ERR4769555 Other La1.3 None
ERR4796254 Sensitive lineage4 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4796577 MDR-TB None
ERR2514801 Other lineage1.1.3.2 gb
ERR4797193 HR-TB lineage1.1.2 None
ERR4797184 Sensitive lineage4 None
ERR4797264 Sensitive None
ERR4797474 Other None
ERR4808964 RR-TB lineage2.2.1 None
ERR4798099 Other None
ERR4799378 Sensitive lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR6358979 Other None
ERR6358951 HR-TB lineage4 None
ERR6359069 Other lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR6359070 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6866022 Other None
ERR736817 HR-TB lineage4.3.4 None
ERR6866241 Other lineage4.3.2 None
ERR6866410 Sensitive None
ERR6866807 HR-TB lineage4 None
ERR6866547 Sensitive lineage4 None
ERR6866639 Other None
ERR736848 HR-TB None
ERR736831 HR-TB lineage4.9 None
ERR736834 Sensitive lineage4 None
ERR736820 MDR-TB lineage1.2.2.2 None
ERR736837 Other lineage4.9 None
ERR9117827 Other lineage1.2.2.2 None
ERR751326 Sensitive lineage4 None
ERR751345 Other lineage5.1.1 None
ERR7801175 RR-TB lineage4.6.5 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9117823 Other lineage1.1.1 None
ERR736856 HR-TB lineage4 None
ERR736872 Sensitive lineage4 None
ERR736875 HR-TB lineage4 None
ERR7801176 RR-TB lineage4.6.5 None
ERR9117812 Other lineage4.3.1.1 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9119483 Pre-XDR-TB lineage5.2 None
ERR9787256 Other lineage6.1.3 None
ERR970413 MDR-TB lineage2.2.1 None
ERR970445 MDR-TB lineage2.2.1 None
ERR9786076 Sensitive lineage3 None
ERR987734 HR-TB lineage4.3.4.2 None
ERR9787336 Other lineage6 None
ERR9787362 Sensitive lineage6 None
SRR023450 RR-TB lineage2.2.1 None
SRR023487 RR-TB lineage2.2.1 None
SRR10315551 Sensitive lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR10315558 Sensitive lineage2.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR10808668 Sensitive lineage2.2.1 None
SRR10808399 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR10809074 Sensitive lineage4 None
SRR11342688 Other lineage4.2.2.2 None
SRR11342683 Other lineage4.1.2 None
SRR1172885 HR-TB lineage4.9 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1172717 Other lineage4.9 None
SRR1158918 Sensitive lineage4 None
SRR1172807 Sensitive lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173139 Sensitive lineage4.9 None
SRR1173361 MDR-TB lineage4.6.1 None
SRR1173385 Sensitive lineage4.9 None
SRR1173568 Other lineage4.9 None
SRR1173421 RR-TB lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
SRR1173833 Other lineage4.9 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR1173740 Other None
SRR1173766 Sensitive lineage4.9 None
SRR1173777 Other lineage4 None
SRR1175487 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180444 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1180996 HR-TB lineage4 None
SRR1180977 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181402 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1183965 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
SRR11972449 MDR-TB lineage2.2 None
SRR1184308 Sensitive lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR11972175 MDR-TB lineage2.2.1 None
SRR11972367 Sensitive lineage2.2.1 None
SRR13180204 Sensitive lineage3 None
SRR16156188 HR-TB lineage4.9 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR14801749 Sensitive None
SRR14802079 MDR-TB lineage4.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR1791747 Other La1.8.1 None
SRR18912069 Other lineage4.1.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR18003049 Other lineage2.2.1 None
SRR18572455 Sensitive lineage4.9 None
SRR19303818 Other lineage4.3.4.2 None
SRR19295647 Sensitive lineage4.9 None
SRR19303819 Other lineage4.6.2.2 None
SRR19303907 Other lineage4.8 None
SRR19303899 Other lineage3 None
SRR20632814 Sensitive lineage4 None
SRR21677886 Sensitive lineage4.9 None
SRR20969542 Other lineage4.4.2 None
ERR176780 Sensitive lineage4.9 None
SRR21727760 Other lineage2.2.1 None
SAMEA3501065 RR-TB lineage4.8 None
ERR176779 HR-TB None
ERR176778 HR-TB None
ERR4815709 Sensitive lineage4.1.2.1 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
SRR3675246 Sensitive lineage4 None
SAMN02567676 MDR-TB lineage4.6.1 None
ERR4815471 Other lineage4.9 None
ERR702405 Sensitive lineage2.1 None
ERR176482 Sensitive lineage4.3.4.2.1 None
ERR181824 HR-TB lineage4 None
ERR176651 HR-TB None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR3675265 Other lineage4 None
ERR4814874 MDR-TB lineage1.1.2 None
ERR181887 HR-TB None
ERR2229541 Other lineage4.8 None
ERR176740 HR-TB None
SRR3675513 Other lineage4.8 None
SAMEA3501015 Other lineage4.8 None
ERR2229540 Other lineage4.8 None
ERR4816964 Other lineage4.9 None
ERR2027257 Other lineage4.1.2.1 None
ERR4816526 Sensitive lineage4.2.2 None
ERR2027277 Other lineage4.8 None
ERR212034 HR-TB None
ERR212125 HR-TB lineage4 None
ERR4816458 Other lineage1.2.2.2 None
ERR2229204 Other lineage4.8 None
ERR2027256 Other lineage4.1.2 None
ERR2027290 RR-TB lineage3.1 None
SRR5341422 HR-TB lineage2.1 None
ERR2229147 Other lineage4.8 None
ERR4816470 Other lineage3 None
ERR212138 HR-TB lineage4 None
ERR216978 Sensitive lineage4.3.4.2.1 None
ERR4816548 MDR-TB lineage4.5 None
ERR216965 HR-TB lineage4.9 None
SRR5341384 Sensitive lineage4.9 None
ERR2229436 Other lineage4.8 None
ERR4817189 Other lineage4.7 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR2228810 RR-TB lineage4 None
ERR2228890 Other lineage4 None
ERR2228815 RR-TB lineage4.8 None
ERR2228838 RR-TB lineage4.8 None
ERR2228900 RR-TB lineage4.8 None
ERR2228899 RR-TB lineage4.8 None
ERR228175 Sensitive lineage3 None
ERR4818710 Sensitive lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR3275996 HR-TB lineage4.3.4.1 nl
ERR2513382 RR-TB lineage4.1.1.3 None
ERR228180 Sensitive lineage3 None
ERR2513121 Sensitive lineage3.1.3 None
ERR4818110 Sensitive lineage4.9 None
ERR2512423 Other lineage4.1.1.3 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR245675 Sensitive lineage1.1.2 None
SAMEA3501063 RR-TB lineage4.8 None
ERR4818126 RR-TB lineage1 None
ERR4819051 Other lineage4 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4818536 Other lineage4.9 None
ERR4818570 Other lineage4.3.3 None
ERR4818583 Other lineage4.3.3 None
SRR5341366 Sensitive lineage4 None
ERR3275709 HR-TB lineage3 nl
SRR5341453 Sensitive None
SRR5341373 HR-TB lineage4 None
SAMEA3501067 RR-TB lineage4.8 None
ERR4819198 Other lineage2.2.1 None
ERR4819217 Other lineage1.2.2.2 None
SRR5341387 Other lineage4 None
ERR4819456 Other lineage4.8 None
ERR4819357 Other lineage4.9 None
SRR5341425 Other lineage4 None
SRR5341400 HR-TB lineage4 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR4820484 Other lineage4.8 None
SRR5341432 HR-TB lineage4 None
ERR2514430 Other lineage4.1.1.3.1;lineage3.1.2 None
ERR4819462 Other lineage4 None
ERR4820478 Other lineage3.1.3 None
SRR5341300 Other lineage4 None
SRR5341293 HR-TB lineage4 None
ERR4820503 Other lineage2.2.1 None
ERR4820494 Sensitive lineage4.9 None
SRR5341455 Sensitive lineage4 None
SRR5341298 Sensitive lineage4 None
SRR5341303 RR-TB lineage4 None
ERR4819830 Other lineage2.2.1 None
SRR5341299 Sensitive lineage4 None
SRR2024953 MDR-TB lineage2.2.1 cn
ERR4819933 Other lineage4.9 None
SRR5341313 HR-TB None
SAMEA3501070 RR-TB lineage4.8 None
SRR5341308 Sensitive lineage4 None
ERR1023509 Other None
SRR5341315 Sensitive None
SRR5341310 Other lineage1.1.2 None
SRR5341319 Other lineage3 None
SRR5341467 Other lineage4 None
ERR2515032 Other lineage3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341461 Sensitive lineage4 None
ERR4821811 RR-TB lineage4.9 None
SRR5341469 Other lineage4 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
SAMEA3501052 RR-TB lineage4.8 None
SRR6046087 Other None
SRR6045516 Other lineage3.1.1 None
SRR6046089 Other lineage4.1.2.1 None
SAMEA3501046 RR-TB lineage4.8 None
SRR6046117 RR-TB lineage4.9 None
SRR6045553 RR-TB lineage4.9 None
ERR4821655 Sensitive lineage4 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6046210 Other lineage4 None
SRR6046141 Other lineage4.9 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045763 Pre-XDR-TB lineage2.2.1 None
SRR6045832 HR-TB lineage4.9 None
SRR6044875 HR-TB lineage4.9 None
SRR6045892 Sensitive None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6045010 Other lineage4 None
SRR6045928 Other lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045191 Sensitive lineage4.9 None
SRR6045976 Sensitive lineage4.9 None
SRR6045158 Other lineage4.9 None
SRR6045263 Sensitive lineage4.9 None
SRR6045358 Sensitive lineage4.9 None
SRR6046376 Other lineage3 None
SRR6046259 Sensitive lineage4.9 None
SRR6046343 Other lineage2.2.1 None
SRR6046359 Other lineage4.7 None
SRR6046385 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None