lineage | Count |
---|---|
lineage4.3.4.2 | 1 |
lineage1.2.1.2.1;lineage4.9 | 1 |
lineage4.1.2.1 | 2 |
lineage4.1.2 | 1 |
lineage2.2.2 | 2 |
lineage2.2.1 | 4 |
lineage3;lineage4.9 | 1 |
lineage4.9 | 8 |
lineage2;lineage4 | 1 |
lineage4.1 | 1 |
lineage4.3.2.1 | 2 |
lineage4.4.1.1 | 1 |
lineage3;lineage4 | 1 |
lineage3.1.2.1 | 1 |
lineage4.6.5 | 2 |
lineage4.1.1.1 | 1 |
lineage2.2.1;lineage4.5 | 1 |
lineage3 | 2 |
lineage4.4.1.1.1 | 2 |
lineage3.1.1 | 1 |
lineage4.8.1 | 1 |
lineage4.3.3 | 2 |
lineage4.2.2.2 | 1 |
lineage2.2;lineage4 | 1 |
lineage4.1.3 | 1 |
lineage4.2.1 | 1 |
lineage4.6.1.1 | 1 |
lineage4.6.2.2 | 1 |
lineage4.1.1.3 | 1 |
lineage2.2.1.1 | 1 |
1 | |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 49 |
ID | Drug resistance | Lineage | Country iso2 | SRR11342673 | RR-TB | lineage4.3.4.2 | None | SRR6153036 | Other | lineage1.2.1.2.1;lineage4.9 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | ERR4815502 | Other | lineage4.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1181403 | Other | lineage4.9 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR4818393 | RR-TB | lineage3;lineage4 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6046376 | Other | lineage3 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820586 | Other | lineage3 | gb | SRR1181256 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4821334 | Other | lineage4.1.3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4818128 | Other | lineage4.1.2.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4817069 | RR-TB | None | SRR9971122 | MDR-TB | lineage4.8 | None |
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