EBG00000313339 - n.927C>T


Drug resistance types
19 Sensitive 36 RR-TB 17 HR-TB 46 MDR-TB 24 Pre-XDR-TB 0 XDR-TB 213 Other
lineage Counts
lineage Count
lineage4.8 22
lineage4.1.2.1 29
lineage2.2.1 63
lineage4.9 43
lineage3 23
lineage4.9;lineage3.1.1 1
lineage4 20
lineage4.3.2.1 2
lineage1.2.2.2 5
lineage4.3.4.2 7
lineage1.2.1.1 1
lineage4.1.2 6
lineage4.4.1.1 9
lineage3.1 2
lineage4.6.1.2 1
lineage4.1.3 1
lineage4.6 1
lineage3.1.2.1 1
lineage4.7 5
lineage4.8.1 3
lineage4.3.3 11
lineage6 2
lineage4.1.1.3.1 3
lineage4;lineage3 1
lineage4.6.2.2 5
lineage4.6.1.1 3
lineage4.3.1.1 2
lineage6.1.3 1
6
lineage4.1.1.3 4
lineage3.1.3 2
lineage4.2.2.2 3
lineage4.3.4.2.1 7
lineage4.2.2.2;lineage3 1
lineage1.1.2 5
lineage4.4 1
lineage4.1.1 4
lineage3.1.2.2 3
lineage4.8.2 1
lineage3.1.1 3
lineage1.1.3.3 2
lineage4.9;lineage3 1
lineage4.6.5 1
lineage4.2.1 3
lineage4.3.2 2
lineage4.3.4.1 5
lineage2.2.1.1 3
lineage2.2.2 7
lineage1.2.1.2 2
lineage4.9;lineage4.1 1
lineage4.9;lineage1.1 1
lineage4.9;lineage4.3.4 1
lineage4.3.4 2
lineage1.1.1.1 1
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
La1.8.2 1
lineage2.2.2;lineage2.2.1 1
lineage2.2 1
lineage4.2.2 1
lineage4.4.2 2
lineage4.5 1
lineage6.1.1 1
spoligotype Counts
spoligotype Count
None 355
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4814362 Other lineage4.8 None
ERR4815572 Other lineage4.1.2.1 None
ERR1665405 Pre-XDR-TB lineage2.2.1 None
SRR3675227 Other lineage4.9 None
ERR4815787 Other lineage2.2.1 None
SRR3675288 Other lineage3 None
ERR171142 Other lineage4.9;lineage3.1.1 None
SRR3675265 Other lineage4 None
ERR4813263 MDR-TB lineage4.8 None
ERR4814938 Other lineage4.3.2.1 None
ERR4815919 Other lineage4.8 None
ERR4816928 HR-TB lineage1.2.2.2 None
SRR3675509 Other lineage4.9 None
ERR2027257 Other lineage4.1.2.1 None
SRR3675513 Other lineage4.8 None
SRR3675533 Sensitive lineage3 None
ERR2027232 Other lineage4.3.4.2 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR3675547 Other lineage4.9 None
ERR2027256 Other lineage4.1.2 None
ERR2027255 HR-TB lineage4.4.1.1 None
ERR2027290 RR-TB lineage3.1 None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR4816198 Sensitive lineage4.1.3 None
ERR4817055 Other lineage4.1.2.1 None
SRR3675565 Other lineage3 None
ERR4816699 Other lineage4.6 None
ERR4816458 Other lineage1.2.2.2 None
ERR4816464 Other lineage3 None
ERR4816531 Other lineage4.1.2 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR4817735 Other lineage4.8 None
ERR4817780 Other lineage4.7 None
ERR2510804 Other lineage2.2.1 None
ERR4817853 Other lineage4.8.1 None
ERR4819093 Other lineage4.3.3 None
ERR4818173 Other lineage2.2.1 None
ERR4818574 Other lineage6 None
SRR5007199 Other lineage4.1.2.1 None
SRR5007204 Other lineage4.1.2.1 None
ERR4818904 Other lineage4.8 None
ERR2503364 Sensitive lineage4.8 None
SRR5007155 HR-TB lineage4.1.2.1 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007163 MDR-TB lineage4;lineage3 None
ERR1193816 Sensitive lineage4 ua
ERR552175 Sensitive lineage4 de
ERR4819383 RR-TB lineage4.9 None
ERR4819307 RR-TB lineage4 None
ERR4819622 Other lineage4.1.2.1 None
ERR4819491 Other lineage4.1.2.1 None
ERR4819525 Other lineage3 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4821172 RR-TB lineage4.9 None
SAMN02567682 Other lineage4.6.1.1 ug
ERR4820060 Other lineage4.3.3 None
SRR6045445 Other lineage4.3.1.1 None
SRR6045496 Other lineage6.1.3 None
SRR6045553 RR-TB lineage4.9 None
ERR4819863 RR-TB lineage4.9 None
ERR4820030 Other lineage4.9 None
SRR6046087 Other None
SRR6045464 Other lineage4.1.1.3 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
SRR6046117 RR-TB lineage4.9 None
ERR4821288 Other lineage4.7 None
ERR4821272 RR-TB lineage4.1.2.1 None
SRR6046113 Other lineage4.1.1.3 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045613 Other lineage3.1.3 None
SRR6045726 Other lineage3 None
SRR6045621 Other lineage4.1.1.3 None
SRR6045705 Other lineage4.9 None
SRR6046210 Other lineage4 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045805 Other lineage4.3.1.1 None
SRR5818690 Other lineage4.2.2.2 None
SRR6045743 Other lineage3 None
SRR6045778 Other lineage3.1 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR5818694 RR-TB lineage4.2.2.2;lineage3 None
SRR6044769 Other lineage1.1.2 None
SRR6045944 Other lineage4.1.2.1 None
SRR6044841 Other lineage4.9 None
SRR6045909 Other lineage4.8 None
SRR6044873 Other lineage4.1.1.3.1 None
SRR6045928 Other lineage4.9 None
SRR6044904 Other lineage3 None
SRR6044787 Other lineage4.4 None
SRR6044838 Other lineage4.9 None
SRR6044916 Other lineage4.1.1 None
SRR6045952 HR-TB None
SRR6044958 Other lineage4.4.1.1 None
SRR6044993 Other lineage3 None
SRR6045017 Other lineage3.1.2.2 None
SRR6046159 Other lineage4.8.2 None
SRR6045022 Other lineage3.1.1 None
SRR6045986 Other lineage3 None
SRR6045178 Other lineage3 None
SRR6045138 Other lineage3.1.1 None
SRR6046020 Other lineage3 None
SRR6045295 Other lineage4.7 None
SRR6045267 RR-TB lineage4 None
SRR6045424 Other lineage1.1.2 None
SRR6045384 Other lineage4.1.2 None
SRR6045312 Other lineage1.1.3.3 None
ERR2851354 RR-TB lineage4.9 None
SRR6046343 Other lineage2.2.1 None
SRR6046239 Other lineage4.9;lineage3 None
SRR6046275 Other lineage3.1.1 None
SRR6046359 Other lineage4.7 None
SRR6046484 Other lineage1.2.2.2 None
ERR2851359 Other lineage4.9 None
SRR6046440 Other lineage3.1.2.2 None
SRR6046463 Other lineage4.4.1.1 None
ERR4829247 MDR-TB lineage4.3.3 None
SRR6046442 Other lineage3 None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046482 HR-TB None
SRR6046517 Other lineage4.8 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046701 Other lineage3.1.2.2 None
SRR6046737 Other lineage4.9 None
SRR6046497 Other lineage4.9 None
SRR6046534 Other lineage1.1.2 None
SRR6046729 Other None
SRR6046739 Other lineage1.1.2 None
SRR6046790 Other lineage4.7 None
SRR6046802 Other lineage4 None
SRR6831930 Sensitive lineage4 None
SRR6046848 Other lineage4.6.5 None
ERR4817717 Sensitive lineage4.3.3 gb
ERR502474 Pre-XDR-TB lineage4.9 None
SRR6046815 Other lineage3 None
SRR6046860 Other lineage4.4.1.1 None
SRR6367397 Other lineage4.1.2.1 None
SRR6257067 HR-TB lineage4.2.1 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502478 RR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
ERR4972567 MDR-TB lineage4.3.2 None
ERR502481 Pre-XDR-TB lineage4.9 None
SRR7131032 Other lineage2.2.1 None
SRR7131026 Other lineage2.2.1 None
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
SRR7131098 MDR-TB lineage4.3.3 None
SRR7131068 Other lineage4.8 None
SRR7131075 Other lineage4.8 None
SRR7131104 HR-TB lineage4.3.4.2 None
SRR7131123 Other lineage4.8 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR7131121 Other lineage4.3.3 None
SRR7131145 Other lineage4.1.2.1 None
SRR7131146 Sensitive lineage4.6.2.2 None
SRR7131161 Other lineage4.8 None
SRR7131147 Other lineage4.1.2.1 None
SRR7131196 Other lineage4.8 None
SRR7131182 Other lineage4.1.2.1 None
SRR7131195 Other lineage2.2.1 None
SRR7131216 Other lineage4.1.2.1 None
SRR7131230 HR-TB lineage4.3.4.2 None
SRR7131234 Other lineage4.9 None
SRR7131229 Other lineage4.1.2.1 None
SRR7131237 Other lineage2.2.1 None
SRR7131236 Other lineage4.3.4.2 None
SRR7131275 Other lineage4.1.2.1 None
SRR7131287 Other lineage2.2.1.1 None
SRR7131288 Other lineage4.6.2.2 None
SRR9217359 MDR-TB lineage1.1.2 None
SRR9971372 MDR-TB lineage4.1.1 None
SRR9971029 MDR-TB lineage2.2.2 None
SRR9971070 MDR-TB lineage4.8.1 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
SRR7131297 Other lineage1.2.1.2 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR9971168 Other lineage4.3.2.1 None
DRR184932 Other lineage2.2.1 None
DRR184629 Other lineage2.2.1 None
ERR10796560 MDR-TB lineage4.9;lineage4.1 None
DRR185024 Other lineage2.2.2 None
ERR037234 Sensitive lineage4.9 None
ERR10219876 Other lineage4.3.4.2 None
ERR11465300 Sensitive lineage4.3.4.2.1 None
ERR11465301 Other lineage4.3.4.2.1 None
ERR10796553 Other lineage4.9;lineage1.1 None
ERR10796566 Other lineage4.9;lineage4.3.4 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796571 Other lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796568 Other lineage4.9 None
ERR10796581 HR-TB lineage4.1.2 None
ERR10796588 Other lineage4 None
ERR10796589 Other lineage4.9 None
ERR10796591 MDR-TB lineage4.9 None
ERR10796593 RR-TB lineage4 None
ERR10796592 Other lineage4 None
ERR10796596 Other lineage4.9 None
ERR10796594 Other lineage4.9 None
ERR10796597 Other lineage4 None
ERR10796629 Other lineage4 None
ERR10796599 Other lineage4 None
ERR10796615 Other lineage4 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796620 Other lineage4.1.1 None
ERR10796626 Other lineage4.1.2 None
ERR10796628 Other lineage4.3.3 None
ERR10796640 Other lineage4.1.2.1 None
ERR10796631 Other lineage4.3.4 None
ERR10796632 Other lineage4.3.3 None
ERR10796634 Other lineage4 None
ERR10796635 Other lineage4 None
ERR3994126 Other lineage4.9 None
ERR3994105 Sensitive lineage4.1.2.1 None
ERR4024582 MDR-TB lineage4.1.2.1 None
ERR6197038 HR-TB lineage4.9 None
ERR6197026 RR-TB lineage4.9 None
ERR6197036 Other lineage4 None
ERR4457829 MDR-TB lineage4.1.2.1 None
ERR4798769 Other lineage1.1.3.3 None
ERR6197022 Other lineage4.9 None
ERR6197030 Other lineage4.9 None
ERR9117728 Other lineage3 None
ERR9117678 Other lineage4.6.2.2 None
ERR9117695 Other lineage4.1.2.1 None
ERR6197042 RR-TB lineage4.9 None
ERR6197044 RR-TB lineage4.9 None
ERR752012 HR-TB lineage1.1.1.1 None
ERR9117699 Other lineage4.1.2.1 None
ERR9117732 Other lineage1.2.2.2 None
ERR9117759 Other lineage3 None
ERR9117805 Other lineage4.3.2 None
ERR9117781 Other lineage3.1.3 None
SRR10315465 MDR-TB lineage4.4.1.1 None
ERR9117827 Other lineage1.2.2.2 None
SRR1002691 HR-TB lineage4.2.1 None
SRR10315709 MDR-TB lineage2.2.1 None
SRR10315476 MDR-TB lineage4.8 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR11342643 MDR-TB lineage4.1.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1062928 RR-TB lineage4 None
SRR1049672 Other lineage3 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR10993951 RR-TB La1.6 None
SRR11342683 Other lineage4.1.2 None
SRR11342688 Other lineage4.2.2.2 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR11349187 Pre-XDR-TB lineage4.8.1 None
SRR1172282 Other lineage4.9 None
SRR11349203 MDR-TB lineage4.4.1.1 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1140736 RR-TB None
SRR11349207 RR-TB lineage2.2.1 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1173170 Other lineage4.9 None
SRR1173113 RR-TB lineage4.3.4 None
SRR1173770 Other lineage4.9 None
SRR1173281 RR-TB lineage3 None
SRR1173740 Other None
SRR15296979 Other La1.8.2 None
SRR1173834 Other lineage4.6.1.1 None
SRR1183034 Sensitive lineage4.9 None
SRR14088360 Sensitive lineage3 None
SRR16058205 HR-TB lineage2.2.1 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR16058218 MDR-TB lineage4.3.4.1 None
SRR16156751 RR-TB lineage4.9 None
SRR16370621 Sensitive lineage4.1.2.1 None
SRR18002872 Pre-XDR-TB lineage2.2.1 None
SRR18002876 MDR-TB lineage2.2.2;lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002901 MDR-TB lineage2.2.1 None
SRR18002909 MDR-TB lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002937 Other lineage2.2.1 None
SRR18002887 MDR-TB lineage2.2.1.1 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
SRR18002948 Other lineage2.2 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002938 Sensitive lineage2.2.2 None
SRR18002950 MDR-TB lineage2.2.1 None
SRR18002956 HR-TB lineage2.2.1 None
SRR18002974 Pre-XDR-TB lineage2.2.1 None
SRR18002964 Other lineage2.2.1 None
SRR18002963 Other lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002976 Other lineage2.2.1 None
SRR18002980 Other lineage2.2.1 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002987 Other lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002997 Other lineage2.2.1 None
SRR18002995 Other lineage4.4.2 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003007 MDR-TB lineage4.5 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18003009 MDR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003033 Other lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18003038 Other lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR18003049 Other lineage2.2.1 None
SRR18003044 MDR-TB lineage2.2.1 None
SRR18003045 Other lineage2.2.1 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR18213684 Pre-XDR-TB lineage4.1.1.3.1 None
SRR19303784 Other lineage4.2.1 None
SRR18714851 Sensitive lineage4 None
SRR18913779 Other lineage3 None
SRR18572456 Sensitive lineage4.9 None
SRR19303796 Other lineage4.3.3 None
SRR19303818 Other lineage4.3.4.2 None
SRR19303805 Other lineage4.8 None
SRR19303815 Other lineage4.8 None
SRR19303820 RR-TB lineage4.8 None
SRR19303907 Other lineage4.8 None
SRR19303817 Other lineage2.2.1 None
SRR19303899 Other lineage3 None
SRR19303819 Other lineage4.6.2.2 None
SRR19303931 Other lineage2.2.1 None
SRR19303917 Other lineage2.2.1 None
SRR19304035 Other lineage4.1.2.1 None
SRR19303949 Other lineage4.3.3 None
SRR19304094 Other lineage6 None
SRR19304083 Other lineage4.4.1.1 None
SRR19304115 Other lineage4.1.2.1 None
SRR19304104 Other lineage4.8 None
SRR21277150 Sensitive lineage2.2.1 None
SRR19317519 Sensitive lineage4.1.2.1 None
SRR21727760 Other lineage2.2.1 None
SRR22048474 RR-TB lineage4.8 None
SRR22424778 RR-TB lineage2.2.1.1 None
SRR21658552 Other lineage6.1.1 None
SRR21727888 Other lineage1.2.1.2 None