lineage | Count |
---|---|
lineage4.8 | 5 |
lineage4.3.3 | 2 |
lineage4.2.2.2 | 1 |
lineage2.2.1 | 2 |
lineage3.1.2.1 | 1 |
lineage4.4.1.1.1 | 2 |
La1.4 | 1 |
lineage2.2.2 | 1 |
lineage4.8.1 | 2 |
lineage4.9 | 3 |
lineage4.1.2.1 | 1 |
lineage4.1.1.1 | 1 |
lineage4.2.1 | 1 |
La1.2 | 1 |
lineage4.8.2 | 1 |
lineage3 | 1 |
lineage4.4 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 28 |
ID | Drug resistance | Lineage | Country iso2 | ERR978765 | RR-TB | lineage4.8 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822000 | Sensitive | lineage3.1.2.1 | gb | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR16278274 | Other | La1.4 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR6046250 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR4769418 | Other | La1.2 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR867567 | RR-TB | lineage3 | None | SRR16627752 | RR-TB | lineage4.4 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None |
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