lineage | Count |
---|---|
lineage2.1;lineage4.9 | 1 |
lineage4.2.2.2 | 1 |
lineage4.1.1.1 | 2 |
lineage2.2.1 | 10 |
lineage4.9 | 12 |
lineage4.2.1 | 1 |
lineage4.4.1.1.1 | 2 |
La1;lineage4.9 | 1 |
lineage1.1.2 | 1 |
lineage4.9;lineage7 | 3 |
La1.7;lineage4.9 | 2 |
lineage4.8.1 | 2 |
lineage4.3.3 | 2 |
La3;lineage4.3.4 | 1 |
lineage2.1;lineage4.9;lineage7 | 1 |
La3;lineage4.9 | 1 |
La1;lineage2;lineage4.9 | 1 |
lineage4.1.1.3 | 1 |
lineage4.4.1.1 | 1 |
spoligotype | Count |
---|---|
None | 46 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR161037 | Other | lineage4.9 | None | SRR21887787 | Pre-XDR-TB | lineage2.2.1 | None | SRR28119785 | Pre-XDR-TB | lineage2.2.1 | None | ERR3077941 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR4769493 | Other | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR387051 | Other | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR369151 | Other | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR28119845 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR21709348 | HR-TB | lineage2.2.1 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR25534440 | HR-TB | lineage2.2.1 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR16156817 | Other | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR1710096 | MDR-TB | lineage2.2.1 | cn |
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