lineage | Count |
---|---|
lineage6 | 1 |
lineage4.4.1.1 | 1 |
lineage1 | 1 |
lineage4.8.2 | 1 |
lineage4.1.1.3.1 | 2 |
lineage4.9 | 10 |
lineage2.2.1 | 9 |
lineage3 | 2 |
lineage1.1.3 | 1 |
lineage4.3.3 | 1 |
lineage4 | 5 |
lineage5.1.1 | 1 |
8 | |
lineage4.1.1 | 1 |
lineage4.9;La1.3 | 1 |
lineage1.1.2 | 1 |
lineage4.2.1 | 1 |
lineage4.8 | 2 |
lineage4.3.4 | 1 |
lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 51 |
ID | Drug resistance | Lineage | Country iso2 | ERR4818787 | MDR-TB | lineage6 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4818126 | RR-TB | lineage1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR1710096 | MDR-TB | lineage2.2.1 | cn | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821264 | Other | lineage1.1.3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | ERR323107 | Other | lineage4 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR3077941 | Pre-XDR-TB | lineage2.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR1034634 | HR-TB | None | ERR369156 | Sensitive | lineage4.9 | None | ERR133825 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR1274697 | HR-TB | lineage4.1.1 | None | ERR387051 | HR-TB | None | ERR369157 | Sensitive | lineage4.9 | None | SRR25534440 | HR-TB | lineage2.2.1 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR28119785 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR21709348 | HR-TB | lineage2.2.1 | None | SRR25534444 | HR-TB | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR21887787 | Pre-XDR-TB | lineage2.2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | ERR212123 | Other | None | SRR3675230 | RR-TB | lineage3 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4816756 | RR-TB | None | ERR2229370 | Sensitive | lineage4.8 | None |
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