EBG00000313339 - n.884G>T


Drug resistance types
29 Sensitive 19 RR-TB 11 HR-TB 29 MDR-TB 10 Pre-XDR-TB 0 XDR-TB 97 Other
lineage Counts
lineage Count
lineage1.2.1.1 2
lineage4.3.4.2.1 2
lineage4.6 2
lineage4.9 20
lineage3.1 2
lineage4.8 11
lineage4.1.3 1
lineage2.2.1 26
lineage2.2.2 4
lineage3 20
lineage4.1.1.3.1 3
lineage4.1.2.1 12
lineage4.3.3 4
lineage4.8.2 1
lineage4.4.1.1 8
lineage4.1.1.3 5
lineage4.3.4.2 1
lineage4.3.1.1 4
lineage4.1.2 6
lineage4.6.2.2 5
lineage4.2.1 4
lineage4.2.2.2 2
lineage3.1.1 6
lineage4 8
lineage1.1.2 3
lineage1.1.3.3 1
lineage4.7 2
lineage3.1.2 1
lineage1.1.1.1 2
lineage3.1.2.2 2
2
lineage4.6.5 1
lineage2.2.1.1 3
lineage4.3.2.1 1
lineage4.4.2 2
lineage4.3.2 1
lineage4.2.2 1
lineage4.3.4.1 3
lineage4.3 2
lineage6 3
lineage4.1.1 2
La1.3 2
lineage1.2.2.2 1
lineage4.4.1.2 1
spoligotype Counts
spoligotype Count
None 195
Geographic prevalence
Country level data for this variant is available for 17 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675261 Other lineage1.2.1.1 None
ERR176580 Sensitive lineage4.3.4.2.1 None
SRR3675291 Sensitive lineage4.6 gb
SRR3675527 RR-TB lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027290 RR-TB lineage3.1 None
ERR2229198 MDR-TB lineage4.8 None
SRR3675552 RR-TB lineage4.9 None
SRR3732646 MDR-TB lineage4.1.3 None
SRR4034072 Sensitive lineage2.2.1 None
SRR4033549 HR-TB lineage2.2.2 None
SRR5007165 MDR-TB lineage3 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR4818774 Other lineage4.8 None
ERR3276170 Other lineage4.1.2.1 nl
ERR4818583 Other lineage4.3.3 None
SRR5007169 RR-TB lineage4.8.2 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR2446154 Sensitive lineage4.4.1.1 nl
ERR4820290 Other lineage3 None
ERR3275615 Sensitive lineage4.4.1.1 nl
SRR6045464 Other lineage4.1.1.3 None
ERR4819706 MDR-TB lineage4.3.4.2 None
ERR4821811 RR-TB lineage4.9 None
SRR6045422 Other lineage4.3.1.1 None
SAMN02585942 Sensitive lineage4.1.2 None
SRR6045447 Other lineage3 gb
ERR4821079 Sensitive lineage4.9 None
SRR5709926 MDR-TB lineage2.2.1 None
SRR6045485 Other lineage4.9 None
ERR4821318 HR-TB lineage4.6.2.2 gb
SRR6045565 Other lineage4.6.2.2 None
SRR6045603 RR-TB lineage4.1.1.3 None
SRR6045664 Other lineage4.2.1 None
SRR6045743 Other lineage3 None
SRR6045705 Other lineage4.9 None
SRR5818586 RR-TB lineage4.2.2.2 None
SRR6045944 Other lineage4.1.2.1 None
SRR6045805 Other lineage4.3.1.1 None
SRR5818663 Sensitive lineage4.1.2.1 dj
SRR6044904 Other lineage3 None
SRR6045778 Other lineage3.1 None
SRR6045843 Other lineage4.2.2.2 None
SRR6045056 Other lineage2.2.1 gb
SRR6044958 Other lineage4.4.1.1 None
SRR6044983 Other lineage3.1.1 None
SRR6044993 Other lineage3 None
SRR6044936 Other lineage4 None
SRR6044945 HR-TB lineage4.1.2.1 gb
SRR6045159 Other lineage3.1.1 None
SRR6045125 Other lineage1.1.2 None
SRR6046020 Other lineage3 None
SRR6046064 Other lineage3 gb
SRR6045267 RR-TB lineage4 None
SRR6045312 Other lineage1.1.3.3 None
SRR6045424 Other lineage1.1.2 None
SRR6046343 Other lineage2.2.1 None
SRR6046291 Other lineage3 None
SRR6046359 Other lineage4.7 None
SRR6046246 Other lineage3 None
SRR6046275 Other lineage3.1.1 None
SRR6046273 Other lineage3.1.2 None
ERR4829917 HR-TB lineage4.7 it
SRR6046612 Other lineage1.1.1.1 None
ERR4829001 MDR-TB lineage4.2.1 it
ERR4829873 Sensitive lineage4.4.1.1 it
SRR6046440 Other lineage3.1.2.2 None
SRR6046521 Other lineage4.4.1.1 None
SRR6046463 Other lineage4.4.1.1 None
SRR6046616 Other lineage4.3.1.1 None
SRR6046668 Sensitive lineage1.1.2 gb
SRR6046701 Other lineage3.1.2.2 None
SRR6046679 Other lineage3 gb
SRR6046852 MDR-TB lineage3 None
SRR6046729 Other None
SRR6046733 Pre-XDR-TB lineage2.2.1 None
SRR6046767 RR-TB lineage2.2.1 None
SRR6046818 Other lineage4.2.1 gb
SRR6046766 Other lineage3.1.1 None
SRR6046815 Other lineage3 None
SRR6046848 Other lineage4.6.5 None
ERR2886463 Sensitive lineage2.2.1 None
SRR6046905 Other lineage3 gb
SRR6982239 HR-TB lineage4.1.1.3 None
SRR7131221 Other lineage4.6.2.2 None
SRR9971246 MDR-TB lineage4.1.1.3 None
SRR7131071 Sensitive lineage4.1.2.1 None
SRR7131169 Other lineage4.1.2.1 None
SRR6982246 Sensitive lineage4 None
SRR7131004 Other lineage4.6.2.2 None
SRR7131013 Sensitive lineage4.1.2.1 None
SRR7131122 Other lineage2.2.1 None
SRR7131134 Sensitive lineage4.1.2.1 None
SRR7645936 Sensitive lineage2.2.1 None
SRR7131287 Other lineage2.2.1.1 None
SRR9970980 Other lineage4.1.2 None
SRR7585400 MDR-TB lineage3 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9971065 RR-TB lineage2.2.1 None
SRR9971046 MDR-TB lineage4.8 None
SRR8649119 Other lineage4.6 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR9971113 Other lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR9971178 MDR-TB lineage4.8 None
ERR323048 Pre-XDR-TB lineage4.9 None
ERR10796561 Other lineage4.3.2 None
DRR185000 Other lineage1.1.1.1 None
DRR188816 Sensitive lineage4.2.2 None
ERR10796555 Other lineage4.1.2.1 None
ERR10796562 Other lineage4.3.4.1 None
ERR10796564 Other lineage4.3.3 None
ERR10796563 Other lineage4.3.3 None
ERR6197036 Other lineage4 None
ERR10796582 HR-TB lineage4.3 None
ERR10796598 RR-TB lineage4.9 None
ERR133816 MDR-TB lineage2.2.1 None
ERR3283033 Sensitive lineage4.9 None
ERR3797065 MDR-TB lineage4 None
ERR3806588 Other lineage6 None
ERR4596904 MDR-TB lineage3.1.1 None
ERR10796586 Other lineage4.9 None
ERR10796595 Other lineage4.9 None
ERR10796599 Other lineage4 None
ERR10796618 Other lineage4.3.4.1 None
ERR10796620 Other lineage4.1.1 None
ERR10796627 Other lineage4 None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3283046 MDR-TB lineage4.9 None
ERR4596944 MDR-TB lineage3.1.1 None
ERR4769436 Other La1.3 None
ERR4769453 Other La1.3 None
ERR4796351 MDR-TB lineage4.9 None
ERR6197024 RR-TB lineage4.9 None
ERR9117729 Other lineage3 None
ERR9117678 Other lineage4.6.2.2 None
ERR9117725 Other lineage4.1.1 None
ERR9117732 Other lineage1.2.2.2 None
ERR9117788 Other lineage3 None
ERR9117760 HR-TB lineage4.3 None
ERR9117763 HR-TB lineage3 None
ERR9117806 Other lineage4.8 None
ERR9117812 Other lineage4.3.1.1 None
ERR9896153 RR-TB lineage4.4.1.1 None
ERR9787033 Sensitive lineage6 None
ERR9992784 Pre-XDR-TB lineage2.2.2 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR10315579 Other lineage2.2.1.1 None
SRR10315558 Sensitive lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR10315556 Sensitive lineage2.2.1 None
SRR11342634 MDR-TB lineage4.8 None
SRR10315640 MDR-TB lineage4.8 None
SRR10315693 RR-TB lineage4.1.2 None
SRR10379958 Sensitive lineage4.3.4.1 None
SRR11349179 MDR-TB lineage2.2.1 None
SRR1173515 HR-TB lineage4.9 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR1180237 Sensitive lineage4.1.2 None
SRR1181242 Sensitive lineage4.1.2 None
SRR1182994 Sensitive lineage4.1.2 None
SRR1184308 Sensitive lineage4.9 None
SRR16157123 Other lineage4.9 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR16156188 HR-TB lineage4.9 None
SRR16156804 RR-TB lineage4.9 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002875 MDR-TB lineage2.2.2 None
SRR1735591 Other lineage4.1.2.1 None
SRR18002908 Other lineage2.2.1 None
SRR18003042 Other lineage2.2.1 None
SRR18002930 MDR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18002991 Pre-XDR-TB lineage2.2.1 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18213721 Other lineage4.8 None
SRR18213726 Other lineage3 None
SRR19303808 Sensitive lineage4.1.2.1 None
SRR18213736 MDR-TB lineage3 None
SRR18909918 Other lineage2.2.1.1 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18913750 Other lineage2.2.1 None
SRR19304057 Sensitive lineage4.4.1.2 None
SRR19303985 Other lineage4.8 None
SRR20969542 Other lineage4.4.2 None
SRR19304094 Other lineage6 None
ERR4815419 Other lineage4.8 None
SRR22048392 Other lineage4.8 None
SRR22424765 MDR-TB lineage4 None
ERR4812763 Other lineage2.2.1 None
SRR3675234 Other None