EBG00000313339 - n.2112T>C


Drug resistance types
56 Sensitive 29 RR-TB 34 HR-TB 48 MDR-TB 27 Pre-XDR-TB 0 XDR-TB 132 Other
lineage Counts
lineage Count
lineage4.9 74
lineage2.2.1 60
La1.8.1 2
lineage4.4.2 9
lineage4.1.2;lineage4.9 1
lineage2.2.2 5
lineage3.1.2.2 2
lineage3 17
lineage4 3
lineage4.1.2.1 16
lineage3;lineage4.9 1
lineage2.2.1.1 7
lineage4.1.2 1
lineage2.2;lineage4 1
lineage4.8.1 4
lineage4.7 1
lineage4.1.1.3.1 2
lineage4.1.3 1
lineage4.2.2 7
lineage4.3.4.2.1 1
lineage4.1.1.1 3
lineage4.3.3 7
lineage4.4.1.1 7
lineage4.5 1
lineage5.1.1 2
lineage4.2.1 7
lineage4.1.1.3 9
lineage4.8 15
lineage4.1.1.3.1;lineage4.9 1
lineage4.2.2.2 3
lineage2.2.1;lineage4.9 3
La1.3 5
lineage4.3 2
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.1.3;lineage4.9 2
lineage6.3.1 1
lineage1.2.1.1 1
lineage4.3.4.2 3
lineage2.2.1;lineage4 2
lineage4.4.1.1.1 2
lineage4.2.1.1 3
lineage2.2.1;lineage4.1.2.1 1
lineage4.3.4.1 2
lineage4.3.2.1 3
lineage1.2.2.2 1
lineage3.1.1;lineage4.9 1
lineage6.1.3 1
lineage2;lineage4.9 1
La2 1
lineage3.1.1 5
lineage2.2.1;lineage2.2.2 1
lineage4.1.2.1;lineage4.9 2
lineage3.1.2.1 2
lineage2.2;lineage4.9 1
lineage3;lineage4.2.2.2 1
lineage3.1 1
lineage4.3.4.1;lineage4.9 1
lineage4.3.2 1
La1;lineage4.9 1
lineage4.4.1.2 2
M.canetti;lineage2.1;lineage4.9 1
La3;lineage4 1
spoligotype Counts
spoligotype Count
None 326
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1180300 Sensitive lineage4.9 None
SRR12708418 HR-TB lineage2.2.1 None
SRR6824624 Sensitive lineage2.2.1 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR7236369 Other La1.8.1 None
SRR12062493 Pre-XDR-TB lineage4.4.2 None
ERR2600576 Pre-XDR-TB lineage2.2.1 None
SRR6982246 RR-TB lineage4.1.2;lineage4.9 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR1180375 Sensitive lineage4.9 None
SRR3619764 Pre-XDR-TB lineage2.2.1 None
SRR18003046 MDR-TB lineage2.2.1 None
SRR6046440 Other lineage3.1.2.2 None
SRR1180420 Sensitive lineage4.9 None
ERR9786076 Other lineage3 None
SRR3675265 Other lineage4 None
SRR18002974 Other lineage2.2.1 None
SRR7131147 Other lineage4.1.2.1 None
SRR6045832 Other lineage4.9 None
SRR5007163 Other lineage3;lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
ERR10796581 Other lineage4.1.2 None
ERR3470682 Other lineage3 None
ERR473279 Other lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR2027257 Other lineage4.1.2.1 None
SRR18002995 Other lineage4.4.2 None
SRR16156832 RR-TB lineage2.2;lineage4 None
ERR176780 Sensitive lineage4.9 None
SRR18003047 MDR-TB lineage2.2.1 None
SRR7069082 Other lineage4.1.2.1 None
ERR3439489 RR-TB La1.8.1 None
SRR6045909 Other lineage4.8.1 None
ERR10796634 Other lineage4.7 None
SRR5341365 Pre-XDR-TB lineage3 None
SRR7070251 Sensitive lineage4.1.1.3.1 None
SRR11342671 RR-TB lineage4.1.3 None
ERR10796571 Other lineage4.9 None
SRR18002984 MDR-TB lineage2.2.2 None
ERR3559276 HR-TB lineage4.2.2 None
SRR5818647 Other lineage4.3.4.2.1 None
SRR12708415 HR-TB lineage2.2.1 None
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
ERR4769525 Sensitive lineage4.9 None
SRR18002963 Other lineage2.2.1 None
SRR20969542 Other lineage4.4.2 None
SRR3675461 RR-TB lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR18002956 Other lineage2.2.1 None
ERR10796555 Other lineage4.1.2.1 None
SRR1181283 Sensitive lineage4.9 None
SRR6982141 Other lineage4.3.3 None
ERR10796592 Other lineage4.9 None
SRR7069835 Other lineage2.2.1 None
ERR10796591 Other lineage4.9 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SRR11342684 HR-TB lineage4.4.1.1 None
SRR3675582 Other lineage4.9 None
SRR11342653 MDR-TB lineage2.2.1 None
SRR18003007 MDR-TB lineage4.5 None
SRR1172807 Sensitive lineage4.9 None
SRR11972417 MDR-TB lineage2.2.1 None
ERR502517 Other lineage5.1.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR1181214 Other lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR1180250 Other lineage4.9 None
SRR7069074 Other lineage3 None
SRR15368914 MDR-TB lineage2.2.1 None
SRR11342698 RR-TB lineage4.4.1.1 None
SRR18002967 HR-TB lineage2.2.1 None
SRR1184308 RR-TB lineage4.9 None
SRR7131149 Pre-XDR-TB lineage4.8 None
SRR1172717 Sensitive lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
ERR10796577 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR867567 RR-TB lineage3 None
SRR14801325 Pre-XDR-TB lineage4.2.1 None
SRR6045986 Other lineage3 None
ERR3797062 RR-TB lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
ERR867538 Other lineage4.2.2.2 None
ERR4769516 Sensitive lineage4.9 None
SRR7131145 Other lineage4.1.2.1 None
SRR21677886 Sensitive lineage4.9 None
SRR13423546 Other lineage4.4.2 None
ERR10762248 MDR-TB lineage4.2.1 None
SRR19303820 RR-TB lineage4.8 None
ERR2229148 Other lineage4.8 dk
SRR1180391 Sensitive lineage4.9 None
SRR18003023 Other lineage2.2.1 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
SRR3675389 Other lineage4.9 None
ERR4769555 Sensitive La1.3 None
ERR10796593 Other lineage4.3 None
ERR4800297 Other lineage4.1.1.3 in
ERR3559286 HR-TB lineage4.2.2 None
ERR867571 Other lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR6045952 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045384 Other lineage4.1.2.1 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR19303899 Other lineage3 None
SRR6046729 Other lineage3 None
SRR22424765 HR-TB lineage4.8 None
ERR4808964 RR-TB lineage2.2.1 None
SRR7131294 Other lineage6.3.1 None
SRR18002964 Other lineage2.2.1 None
ERR10762275 MDR-TB lineage4.2.1 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
ERR2027209 MDR-TB lineage1.2.1.1 None
SRR11342649 MDR-TB lineage4.3.3 None
SRR20632814 Sensitive lineage4.9 None
SRR11342673 RR-TB lineage4.3.4.2 None
ERR867568 Other lineage2.2.1;lineage4 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR4809333 Pre-XDR-TB lineage2.2.2 None
ERR4769408 Other La1.3 None
SRR16156697 RR-TB lineage2.2.1 None
ERR10796628 Other lineage4.3.3 None
ERR5162090 RR-TB lineage4.9 None
SRR7131229 Other lineage4.1.2.1 None
SRR1181402 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
SRR6397640 Other lineage4.2.1.1 None
ERR3283043 Other lineage4.9 None
ERR2513259 Other lineage3 None
ERR9907760 Pre-XDR-TB lineage4.3 None
ERR10219876 Other lineage4.3.4.2 None
ERR983238 MDR-TB lineage2.2.1.1 None
ERR4863405 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR3275996 HR-TB lineage4.3.4.1 nl
SRR7131196 Other lineage4.8 None
SRR6045603 Other lineage4.1.1.3 None
SRR7070521 Other lineage4.2.1.1 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR1175487 Sensitive lineage4.9 None
SRR18002976 Other lineage2.2.1 None
SRR11342691 MDR-TB lineage2.2.1 None
ERR4769439 HR-TB lineage4.9 None
SRR7070535 HR-TB lineage4.1.2.1 None
ERR4811708 HR-TB lineage4 None
ERR4769514 Other La1.3 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1181349 Sensitive lineage4 None
SRR1180312 Sensitive lineage4.9 None
SRR15315797 RR-TB lineage2.2.1 None
SRR11342660 MDR-TB lineage2.2.1 None
SRR7070293 Other lineage4.8 None
SRR16156188 Sensitive lineage4.9 None
SRR18003013 Pre-XDR-TB lineage4.4.2 None
SRR18003009 MDR-TB lineage2.2.1 None
ERR4816470 HR-TB lineage3 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR18002887 MDR-TB lineage2.2.1.1 None
ERR3283032 Other lineage4.9 None
SRR11342688 Other lineage4.2.2.2 None
ERR2027255 HR-TB lineage4.4.1.1 None
SRR12708411 HR-TB lineage1.2.2.2 None
SRR5818684 Other lineage4.2.2.2 None
ERR867572 Other lineage4.9 None
ERR867570 RR-TB lineage4.9 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR10796596 Other lineage4.9 None
SRR6046210 Other lineage4.9 None
ERR171142 Other lineage3.1.1;lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR6045496 Other lineage6.1.3 None
ERR4769495 Other La1.3 None
SRR11342646 HR-TB lineage3 None
SRR1180319 Sensitive lineage4.9 None
ERR5979407 Other lineage3 None
SRR6807688 Pre-XDR-TB lineage4.2.1 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR10796582 Other lineage4.3.4.1 None
SRR12708409 HR-TB lineage4.3.3 None
DRR120409 HR-TB La2 None
ERR867540 MDR-TB lineage2.2.1 None
SRR3675509 Other lineage4.9 None
ERR10796636 Other lineage4.1.2.1 None
ERR9285979 RR-TB lineage3.1.1 None
SRR6824357 Pre-XDR-TB lineage4.4.2 None
SRR19303818 Other lineage4.3.4.2 None
SRR18002935 Pre-XDR-TB lineage2.2.1 None
ERR4820484 Sensitive lineage4.8 None
SRR18003052 Other lineage2.2.1.1 None
SRR1175512 Sensitive lineage4.9 None
SRR18003042 Other lineage2.2.1 None
SRR7070154 Other lineage4.4.1.1 None
SRR12708392 Other lineage2.2.1 None
SRR7131195 Other lineage2.2.1 None
ERR2600574 MDR-TB lineage2.2.1 None
SRR1173310 Other lineage3.1.1 None
SRR18003045 Other lineage2.2.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR1180413 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
SRR19304115 Other lineage4.1.2.1 None
SRR1062919 HR-TB lineage2.2.1 None
SRR18002876 MDR-TB lineage2.2.1;lineage2.2.2 None
SRR12708419 Other lineage4.3.3 None
SRR5709926 MDR-TB lineage2.2.1 None
ERR3283006 RR-TB lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR1180410 Sensitive lineage4.9 None
ERR867569 Other lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR11349207 RR-TB lineage2.2.1 None
ERR4817499 Sensitive lineage2.2.1.1 None
SRR10315558 RR-TB lineage2.2.1 None
ERR4819175 Other lineage4.1.1.3 gb
SRR1049675 HR-TB lineage2.2.1 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR21240012 Sensitive lineage4.1.2.1 None
SRR1181368 Other lineage4.9 None
ERR10796635 Other lineage4.8 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR17567917 RR-TB lineage4.4.1.1 None
SRR1180345 Other lineage4.9 None
SRR7070553 Other lineage3 None
SRR6045553 Other lineage4.1.2.1;lineage4.9 None
SRR13180204 Other lineage3 None
ERR4815022 Other lineage3.1.2.1 None
SRR15316595 RR-TB lineage4.4.2 None
SRR6982239 Sensitive lineage4.1.1.3 None
SRR5153091 HR-TB lineage4.3.3 None
SRR1184021 Sensitive lineage4.9 None
SRR3601585 Pre-XDR-TB lineage2.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR5818694 Other lineage3;lineage4.2.2.2 None
ERR10796620 Other lineage4.1.1.1 None
ERR3559281 HR-TB lineage4.2.2 None
SRR14782539 MDR-TB lineage4.2.1 None
ERR216965 Sensitive lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR4596904 MDR-TB lineage3.1.1 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
SRR10315751 MDR-TB lineage4.8 None
ERR1063855 Other lineage4.9 None
SRR6045778 Other lineage3.1 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR2517074 Pre-XDR-TB lineage3 gb
ERR10796640 Other lineage4.1.2.1 None
ERR10796568 Other lineage4.9 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR19304104 Other lineage4.8 None
SRR6044983 Other lineage3.1.1 None
SRR18002874 MDR-TB lineage2.2.1 None
ERR10796627 Other lineage4.1.2.1;lineage4.9 None
SRR6855695 Sensitive lineage4.8 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
SRR7131061 Other lineage2.2.1 None
SRR7131237 Other lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
ERR751345 Other lineage5.1.1 None
ERR4972567 MDR-TB lineage4.3.2 None
SRR9971270 RR-TB lineage2.2.1 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR9971333 MDR-TB lineage4.1.1.3 None
SRR5007204 Other lineage4.1.2.1 None
SRR6046020 Other lineage3 None
ERR3559275 HR-TB lineage4.2.2 None
SRR7131287 Other lineage2.2.1.1 None
SRR12062542 Pre-XDR-TB lineage2.2.1 None
SRR1183054 Sensitive lineage4.9 None
ERR10762495 MDR-TB lineage2.2.1 None
SRR1180977 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
SRR19303960 Sensitive lineage4.4.1.2 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4769552 Sensitive La1.3 None
ERR10796560 Other lineage4.9 None
SRR7070351 Sensitive lineage3 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR19303907 Other lineage4.8 None
ERR4596944 MDR-TB lineage3.1.1 None
SRR19303815 Other lineage4.8 None
SRR2101087 Other lineage4.4.2 None
ERR2600422 MDR-TB lineage2.2.1 None
SRR1173719 Other lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
SRR11342685 HR-TB lineage4.4.1.1 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
ERR4811101 Other lineage4.4.2 None
ERR126597 HR-TB lineage4.4.1.2 None
ERR10796589 Other lineage4.9 None
SRR18003024 RR-TB lineage2.2.1 None
SRR1180399 Sensitive lineage4.9 None
ERR10796553 Other lineage4.9 None
SRR12062533 Pre-XDR-TB lineage2.2.1.1 None
SRR18003032 Other lineage2.2.1 None
ERR4830549 MDR-TB lineage4.1.1.3 None
ERR2600577 Pre-XDR-TB lineage2.2.1 None
SRR8758877 MDR-TB lineage4.1.1.1 None
SRR11349147 RR-TB lineage4.3.2.1 None
SRR6045928 Other lineage4.9 None
SRR7131216 Other lineage4.1.2.1 None
ERR3559282 HR-TB lineage4.2.2 None
SRR6785281 Other lineage4.2.1.1 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
ERR1023509 MDR-TB lineage4.9 None
SRR12708371 HR-TB lineage4.1.1.3 None
ERR5987263 MDR-TB lineage2.2.1 None
SRR1175506 Sensitive lineage4.9 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR10796566 Other lineage4.9 None
SRR7069783 Other lineage4.1.2.1 None
ERR3283028 Other La3;lineage4 None
ERR867522 Pre-XDR-TB lineage2.2.1 None
ERR3559279 HR-TB lineage4.2.2 None
ERR2515230 Sensitive lineage4.8 None
ERR10762297 MDR-TB lineage4.2.1 None
ERR4817840 Other lineage3.1.2.2 gb
SRR1180406 Sensitive lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4820798 Other lineage3.1.2.1 gb
SRR22048536 Other lineage4.3.3 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR11342662 MDR-TB lineage4.8.1 None