lineage | Count |
---|---|
lineage3 | 9 |
lineage4.4 | 1 |
lineage4.6.1.2 | 3 |
lineage4.9 | 21 |
lineage4.2.1 | 3 |
lineage4.8 | 6 |
lineage4.3.4.2.1 | 4 |
lineage4.4.1.1.1 | 2 |
lineage3.1.1 | 1 |
lineage2;lineage4 | 1 |
lineage2.2.1 | 9 |
lineage4.8.1 | 2 |
lineage4.1.2.1;lineage4.4.1 | 1 |
lineage5.1.1 | 1 |
lineage4.4.2 | 1 |
lineage4.6.1.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.3.3 | 1 |
lineage3.1.2.1 | 1 |
lineage4.1.1.1 | 1 |
lineage3;lineage4 | 1 |
lineage1.1.2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.1.2.1;lineage4.9 | 1 |
lineage2.2.2 | 2 |
lineage4.1.2.1;lineage4.4.1.1 | 1 |
lineage4.2.2.2 | 1 |
lineage4.3.2.1 | 1 |
lineage2.2;lineage4 | 1 |
spoligotype | Count |
---|---|
None | 80 |
ID | Drug resistance | Lineage | Country iso2 | ERR867567 | RR-TB | lineage3 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR1062880 | MDR-TB | lineage4.6.1.2 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR978767 | RR-TB | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR1023509 | Other | lineage4.9 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR1062918 | Other | lineage3 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR14782539 | MDR-TB | lineage4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR1181403 | Other | lineage4.9 | None | ERR4821143 | Other | lineage4.9 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR751345 | Other | lineage5.1.1 | None | ERR4816470 | HR-TB | lineage3 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR6046376 | Other | lineage3 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR16156697 | RR-TB | lineage2.2.1 | None | SRR1184329 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR867573 | Other | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1181256 | Other | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821276 | Sensitive | lineage3 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR11068141 | Sensitive | lineage1.1.2 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR1140716 | Other | lineage3 | None | SRR1173170 | Other | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR2513259 | Other | lineage3 | None | ERR11465833 | Sensitive | lineage4.3.2.1 | None | ERR867575 | Other | lineage4.9 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None |
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