Rv0668 - c.360G>C
Drug resistance types
22 Sensitive
60 RR-TB
21 HR-TB
20 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
76 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.2.2 | 1 |
| lineage4 | 13 |
| lineage4.3.4.2.1 | 5 |
| lineage4.8 | 14 |
| lineage3.1.2 | 1 |
| 24 | |
| lineage2.2.1 | 18 |
| lineage5.1.4 | 1 |
| lineage1.1.3.1 | 2 |
| lineage4.1 | 4 |
| lineage1.1.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2.1 | 10 |
| lineage3 | 21 |
| lineage2.2 | 2 |
| lineage3.1 | 1 |
| lineage5 | 2 |
| La1.8.2 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.9 | 38 |
| lineage4.3.3 | 4 |
| lineage3.1.2.1 | 2 |
| lineage4.1.2 | 2 |
| lineage1.1.1 | 2 |
| lineage2.2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage1 | 1 |
| lineage6 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.1.1 | 1 |
| lineage4.4.1.1 | 8 |
| lineage4.8.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.6.2.2 | 3 |
| lineage3.1.1 | 2 |
| lineage4.3.1.1 | 1 |
| lineage2.1 | 1 |
| lineage4.1.3 | 1 |
| La1.6 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.3 | 1 |
| lineage4.3.2.1 | 2 |
| La1.3 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| La2 | 1 |
| lineage4.4.2 | 1 |
| lineage4.8;lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 213 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4815225 | RR-TB | lineage1.2.2 | None | ERR4814312 | Other | lineage4 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR4815268 | Other | lineage4.8 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR4815310 | Other | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815684 | Other | lineage5.1.4 | gb | ERR4814617 | Other | lineage1.1.3.1 | None | SRR3675222 | Other | None | ERR4814748 | Other | lineage4.8 | None | ERR4814656 | Other | None | ERR4815502 | Other | lineage4.1 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR4814874 | MDR-TB | lineage1.1.2 | None | ERR4814841 | Other | lineage4.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4815550 | Other | lineage4 | None | ERR4815910 | Other | lineage4.1.2.1 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4816944 | RR-TB | lineage2.2 | None | ERR176751 | HR-TB | None | ERR4815901 | Other | lineage2.2 | None | ERR4815909 | Other | lineage4.8 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4816133 | Other | La1.8.2 | None | ERR4816982 | Other | lineage4 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4817060 | RR-TB | None | ERR4816183 | Other | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4817069 | RR-TB | None | ERR212121 | HR-TB | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816470 | Other | lineage3 | None | ERR2229233 | Sensitive | lineage4 | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4817703 | Other | lineage1.1.1 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816831 | Other | lineage4.1.2.1 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4816425 | Other | lineage2.2.2 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818787 | MDR-TB | lineage6 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR2509886 | RR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818173 | Other | lineage2.2.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | ERR4817584 | MDR-TB | lineage3 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4820266 | RR-TB | lineage3 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4819533 | Other | lineage1.1.2 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820324 | Other | lineage4 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR4819456 | Other | lineage4.8 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4820408 | Other | lineage4.1.2.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819765 | Other | lineage4.1 | None | ERR2514655 | Sensitive | lineage3 | None | ERR1023509 | Other | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4820122 | Other | lineage4.3.1.1 | None | ERR4820030 | Other | lineage4.9 | None | ERR4820107 | RR-TB | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR4820833 | HR-TB | None | ERR4821057 | HR-TB | lineage4 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | SRR6045553 | RR-TB | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821310 | Other | lineage5 | None | ERR4821572 | Other | lineage2.1 | None | ERR4821341 | Other | lineage4.3.4.1 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4821334 | RR-TB | lineage4.1.3 | None | ERR4822105 | Other | lineage4.1 | None | ERR4821492 | HR-TB | lineage3 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | SRR6046133 | HR-TB | None | ERR4821773 | Other | La1.6 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045555 | HR-TB | None | SRR6045603 | RR-TB | lineage4.1.1.3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045909 | Other | lineage4.8 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044952 | RR-TB | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6046737 | Other | lineage4.9 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046644 | HR-TB | None | SRR6046376 | Other | lineage3 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR3275941 | RR-TB | lineage4.3 | nl | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | SRR7535086 | Other | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971113 | Other | lineage2.2.1 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR3439265 | Other | lineage4.9 | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4596944 | MDR-TB | lineage3.1.1 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769516 | Other | La1.3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6359045 | HR-TB | None | ERR9786523 | Sensitive | lineage4.1.2.1 | None | ERR6358991 | HR-TB | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | ERR9786444 | Sensitive | lineage4.8 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049672 | Other | lineage3 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1180252 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1181161 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR20969542 | Other | lineage4.4.2 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR20632814 | Sensitive | lineage4 | None | SRR16157123 | Other | lineage4.9 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR17658565 | Other | lineage3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR22424765 | MDR-TB | lineage4 | None | SRR21676307 | Sensitive | lineage4.8 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR22528573 | Sensitive | lineage4.8 | None | SRR22528562 | Sensitive | lineage4.8;lineage4.1.2.1 | None |
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