Rv0668 - c.1323C>T
Drug resistance types
46 Sensitive
27 RR-TB
21 HR-TB
9 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
90 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 2 |
| lineage4.1 | 2 |
| lineage4.9 | 56 |
| lineage3.1.2 | 1 |
| lineage4 | 22 |
| lineage4.1.1.3 | 2 |
| lineage1.1.3.1 | 4 |
| lineage4.8 | 9 |
| lineage1.2.1.1 | 1 |
| 19 | |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.3 | 1 |
| lineage3.1.2.1 | 2 |
| lineage5 | 2 |
| lineage4.1.2.1 | 8 |
| lineage3 | 17 |
| lineage4.1.2 | 3 |
| lineage4.4.1.1 | 2 |
| lineage4.5 | 2 |
| lineage3.1.3 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3.3 | 4 |
| lineage5.1.4 | 1 |
| lineage4.2.1 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.3.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2.1 | 14 |
| La1.8.1 | 2 |
| lineage4.9.1 | 1 |
| lineage2.2.1.2 | 1 |
| La1.3 | 4 |
| La1.2 | 1 |
| lineage4.9;La1.3 | 1 |
| La3 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 203 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675477 | Other | lineage4.9 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4815777 | Other | lineage4.9 | None | ERR4814396 | Sensitive | lineage4.1.1.3 | None | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR4814748 | Other | lineage4.8 | None | SRR3675229 | Other | lineage4 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR1750907 | RR-TB | None | ERR3275450 | Other | lineage4 | None | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR4814841 | Other | lineage4.1 | None | ERR176568 | Other | lineage4.3 | None | SRR3675387 | Sensitive | None | SRR3675283 | Sensitive | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR176643 | HR-TB | None | ERR4814976 | Other | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR2228965 | Other | lineage4.8 | None | ERR176751 | HR-TB | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675510 | Other | None | ERR4816967 | RR-TB | lineage5 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675542 | Other | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4816184 | Other | lineage4.1.2.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816227 | RR-TB | lineage3 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816232 | Other | lineage4 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212033 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4816470 | Other | lineage3 | None | ERR4816756 | RR-TB | None | SRR4034419 | Sensitive | lineage4.4.1.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR4817826 | RR-TB | lineage4.5 | None | ERR4819002 | HR-TB | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR2509886 | RR-TB | lineage3 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4817555 | RR-TB | lineage3 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | ERR4820266 | RR-TB | lineage3 | None | ERR4820265 | Other | lineage4.1.2.1 | None | SRR5341396 | Other | lineage4 | None | ERR4819462 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR4819414 | Other | lineage1.1.3.1 | gb | ERR4819307 | RR-TB | lineage4 | None | ERR4819456 | Other | lineage4.8 | None | ERR2514351 | Sensitive | lineage3 | gb | ERR2514181 | Other | lineage1.2.1.2.1 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819730 | Other | lineage4.8 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR2514655 | Sensitive | lineage3 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4819933 | Other | lineage4.9 | None | ERR4820122 | Other | lineage4.3.1.1 | None | ERR2514854 | Other | lineage4.3.3 | None | ERR2446382 | Other | lineage4 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | ERR4820827 | Other | lineage4.1.2 | None | ERR4819948 | Other | lineage4.4.1.1 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820833 | HR-TB | None | ERR2515032 | Other | lineage3 | None | ERR4820151 | RR-TB | lineage4.8 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR4821057 | HR-TB | lineage4 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR4821915 | RR-TB | lineage4.9 | None | ERR4821276 | Other | lineage3 | None | ERR257885 | HR-TB | lineage4 | None | SRR5535933 | HR-TB | None | ERR4821286 | Other | lineage4.8 | None | ERR4821288 | Other | lineage4.7 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4821310 | Other | lineage5 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR6045892 | Sensitive | None | SRR6046250 | Other | lineage4.9 | None | SRR6044936 | Other | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045424 | Other | lineage1.1.2 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046397 | Other | None | ERR4831739 | MDR-TB | lineage2.2.1 | None | ERR4829208 | RR-TB | lineage4.8 | None | SRR6046815 | Other | lineage3 | None | ERR4831638 | Sensitive | None | ERR4829333 | RR-TB | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR502943 | HR-TB | None | SRR6981961 | Sensitive | lineage2.2.1 | None | SRR6981999 | Sensitive | lineage2.2.1 | None | ERR1035157 | Other | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR7131123 | Other | lineage4.8 | None | ERR037504 | Other | lineage4.9.1 | None | ERR038289 | Other | lineage4.3.3 | None | ERR400320 | Sensitive | lineage4 | None | ERR3468561 | HR-TB | lineage4.9 | None | ERR10796569 | Other | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769555 | Other | La1.3 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR4769418 | Other | La1.2 | None | ERR4769514 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR5979407 | Other | lineage3 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR13837540 | HR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | SRR13837710 | Sensitive | lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2100067 | Other | lineage4.3.3 | None |
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