lineage | Count |
---|---|
lineage4.3.4 | 1 |
lineage4 | 8 |
lineage2.2.1 | 10 |
lineage2.2.1.1 | 2 |
lineage2.2.2 | 1 |
lineage3 | 3 |
lineage4.8 | 1 |
9 | |
La1.2.BCG | 1 |
lineage3.1 | 1 |
lineage4.5 | 1 |
lineage4.9 | 2 |
lineage4.1.2.1 | 2 |
lineage4.3.4.1 | 1 |
lineage4.3.4.2 | 1 |
spoligotype | Count |
---|---|
None | 44 |
ID | Drug resistance | Lineage | Country iso2 | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | SRR18002981 | Other | lineage2.2.1 | None | ERR736875 | HR-TB | lineage4 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR18002963 | Other | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002974 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18003024 | RR-TB | lineage2.2.1 | None | SRR18913779 | Other | lineage3 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR20632814 | Sensitive | lineage4 | None | SRR21727760 | Other | lineage2.2.1 | None | ERR176651 | HR-TB | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR4816090 | Other | La1.2.BCG | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4816470 | Other | lineage3 | None | ERR2513259 | Other | lineage3 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR2851354 | RR-TB | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | SRR5007204 | Other | lineage4.1.2.1 | None | SRR7131145 | Other | lineage4.1.2.1 | None | ERR2984800 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR6982246 | Sensitive | lineage4 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | None | SRR7131195 | Other | lineage2.2.1 | None | ERR1063862 | HR-TB | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3445503 | HR-TB | None |
---|