EBG00000313325 - n.1005delT
Drug resistance types
6 Sensitive
5 RR-TB
13 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 17 |
| lineage3 | 5 |
| lineage2.2.1 | 5 |
| lineage4.8.1 | 1 |
| lineage4.8 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.5 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.3.4 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.2.2.2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1.7.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 43 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR212125 | HR-TB | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR18913779 | Sensitive | lineage3 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR176651 | Other | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR21727760 | Other | lineage2.2.1 | None | SRR18002974 | Other | lineage2.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR867571 | Other | lineage4.9 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR7131195 | Other | lineage2.2.1 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR2513259 | Other | lineage3 | None | ERR867555 | Other | lineage3 | None | ERR867567 | RR-TB | lineage3 | None | ERR181887 | Other | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR6982246 | Sensitive | lineage4.1.2;lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR867568 | Other | lineage2.2.1;lineage4 | None | ERR867538 | Other | lineage4.2.2.2 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None |
|---|
