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SRA data
Rv0668
- c.2589C>G
Drug resistance types
5 Sensitive
4 RR-TB
3 HR-TB
11 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
7
M.canetti;lineage4.9
3
lineage4.3.4.2.1
3
La1.7;M.canetti;lineage4.9
2
lineage3
2
lineage4.8.1
2
lineage4.3.3
2
lineage4.1.1.1
1
La1.7;lineage4.9
1
lineage4.1.1.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
30
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034634
HR-TB
lineage4.9
None
ERR176518
Sensitive
lineage4.3.4.2.1
None
ERR405219
HR-TB
La1.7;lineage3.1;lineage4
None
ERR4818110
Sensitive
lineage4.9
None
ERR4819383
RR-TB
lineage4.9
None
ERR4819864
RR-TB
lineage1.1.3.1
None
SAMN02380982
MDR-TB
lineage4.3.4.2.1
None
SRR1049559
MDR-TB
lineage4.3.4.2.1
None
SRR1049673
Pre-XDR-TB
lineage3
None
SRR1062918
Other
lineage3
None
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