Rv0668 - c.1308C>G
Drug resistance types
57 Sensitive
31 RR-TB
20 HR-TB
35 MDR-TB
11 Pre-XDR-TB
2 XDR-TB
66 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 21 |
| lineage4.9 | 46 |
| lineage1.1.3.1 | 2 |
| lineage3 | 16 |
| lineage4.1.2.1 | 9 |
| lineage4.3.3 | 12 |
| lineage4.1.1.1 | 1 |
| lineage4.6.1.2 | 3 |
| lineage4.8 | 7 |
| La3;lineage4.9 | 8 |
| lineage3;lineage4 | 2 |
| lineage1.2.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.4.1.1 | 9 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.1.3 | 2 |
| lineage4.6.3 | 1 |
| La1.8.1 | 4 |
| lineage4.3.1 | 1 |
| lineage3.1.1 | 2 |
| lineage4.4.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage2;lineage4 | 1 |
| lineage4.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.6.1.1 | 8 |
| lineage4.1.1.3.1 | 2 |
| La1.7;lineage4.9 | 3 |
| lineage4.1.1.3 | 5 |
| lineage4.3.4.1 | 2 |
| lineage4.9;lineage7 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.8.1 | 1 |
| lineage4 | 3 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| La3;lineage4 | 1 |
| lineage6.1.3 | 1 |
| lineage4.2.1 | 2 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.2.2.2 | 1 |
| La1.3 | 1 |
| lineage4.3 | 1 |
| lineage4.3.4.2 | 2 |
| La2 | 1 |
| lineage2.2.2 | 3 |
| lineage4.4.1.1.1 | 2 |
| lineage4.4.1.2 | 2 |
| lineage3;lineage4.9 | 1 |
| lineage1.1.1.1 | 1 |
| La1.4 | 1 |
| 1 | |
| lineage1.2.2.2 | 1 |
| lineage3.1.2.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.6.2.2 | 2 |
| La1.7.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 222 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18002947 | MDR-TB | lineage2.2.1 | None | ERR4816322 | Other | lineage4.9 | None | ERR4819414 | Sensitive | lineage1.1.3.1 | gb | ERR2517074 | Pre-XDR-TB | lineage3 | gb | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4821981 | Other | lineage4.1.2.1 | None | ERR773806 | Sensitive | lineage2.2.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR4821143 | Other | lineage4.9 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | SRR1049736 | Sensitive | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821276 | Sensitive | lineage3 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2517457 | Sensitive | lineage3 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02381051 | RR-TB | lineage4.6.1.2 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | SRR3675230 | Other | lineage3;lineage4 | None | SRR11972417 | MDR-TB | lineage2.2.1 | None | SRR7131160 | Sensitive | lineage3 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4816852 | Other | lineage4.9 | None | SRR6982141 | Other | lineage4.3.3 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR4819096 | Other | lineage4.4.1.1 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR18003046 | MDR-TB | lineage2.2.1 | None | ERR4821245 | Other | lineage4.1.2.1 | None | ERR4821334 | Other | lineage4.1.3 | None | ERR2446413 | Sensitive | lineage4.6.3 | None | SRR11342667 | MDR-TB | lineage4.3.3 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR4815301 | Other | lineage4.4.2 | None | ERR3275615 | Sensitive | lineage4.4.1.1 | nl | ERR3797065 | RR-TB | lineage4.9 | None | ERR037504 | Other | lineage4.9.1 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4820586 | Other | lineage3 | gb | SAMN02381012 | MDR-TB | lineage4.4.1.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4829238 | Sensitive | lineage3 | None | SAMN02381047 | Sensitive | lineage4.6.1.1 | None | SRR7070157 | Other | lineage4.1.1.3.1 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR1049751 | RR-TB | lineage4.6.1.2 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR9786076 | Sensitive | lineage3 | None | SRR2100067 | Other | lineage4.3.3 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR1140586 | Sensitive | lineage4.9 | None | SRR1140724 | Other | lineage2.2.1 | None | SRR1049752 | RR-TB | lineage4.6.1.2 | None | ERR2513405 | Other | lineage2.2.1 | None | SRR1175474 | Other | lineage4.9 | None | SRR12708406 | HR-TB | lineage2.2.1;lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4820324 | Other | lineage4 | None | SRR1049629 | MDR-TB | lineage4.4.1.1 | None | ERR3283046 | Sensitive | lineage4.9 | None | SRR5007204 | Other | lineage4.1.2.1 | None | ERR1023494 | Sensitive | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR2446544 | Sensitive | lineage3 | nl | SAMN02381005 | Sensitive | lineage4.6.1.1 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4816610 | Other | lineage4.3.3 | None | ERR4819772 | Other | lineage1.1.3.1 | None | ERR4819948 | Other | lineage4.4.1.1 | None | ERR3283028 | Other | La3;lineage4 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | SRR17567930 | Sensitive | lineage4.4.1.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR6044983 | Other | lineage3.1.1 | None | ERR4769423 | Other | La1.3 | None | ERR3275941 | RR-TB | lineage4.3 | nl | SRR1062927 | MDR-TB | lineage4.6.1.1 | None | ERR3275548 | Sensitive | lineage3 | nl | ERR216965 | Sensitive | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR2229198 | Sensitive | lineage4.8 | None | SRR11342686 | MDR-TB | lineage4.8 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | SRR13888750 | Other | La2 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR1062937 | Sensitive | lineage4.6.1.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR4829333 | Other | lineage4 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR2446154 | Sensitive | lineage4.4.1.1 | nl | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR3468488 | Other | La1.8.1 | None | ERR1023509 | Other | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR7236330 | Other | La1.8.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR126597 | HR-TB | lineage4.4.1.2 | None | ERR4817584 | Other | lineage3;lineage4.9 | None | ERR4821679 | Other | lineage4.3.3 | None | SRR1049723 | MDR-TB | lineage4.6.1.1 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR16278274 | Other | La1.4 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR9971026 | Sensitive | lineage4.4.1.1.1 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR4819491 | Other | lineage4.1.2.1 | None | ERR2027233 | Sensitive | lineage4.1.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4817069 | RR-TB | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR4821007 | Other | lineage1.2.2.2 | None | SRR18572454 | RR-TB | lineage4.9 | None | SRR19303788 | Sensitive | lineage4.8 | None | ERR3797087 | Sensitive | lineage4.9 | None | SRR1049735 | Sensitive | lineage4.9 | None | SRR11342671 | RR-TB | lineage4.1.3 | None | SRR11342673 | RR-TB | lineage4.3.4.2 | None | ERR038289 | Other | lineage4.3.3 | None | ERR4814312 | Other | lineage4 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | SRR19303779 | Sensitive | lineage4.8 | None | SRR1049744 | Sensitive | lineage4.6.1.1 | None | SRR6044952 | Other | lineage4.9 | None | SRR17567887 | Sensitive | lineage4.4.1.2 | None | ERR4822222 | Other | lineage3.1.2.2 | None | SRR11349133 | MDR-TB | lineage4.3.3 | None | SRR1140736 | Other | lineage4.1.2.1 | None | ERR4817915 | Other | lineage4.9 | None | ERR4821214 | Other | lineage1.2.1.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR3742667 | Sensitive | lineage4.9 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR7645936 | Sensitive | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4815121 | HR-TB | lineage4.6.2.2 | None | SRR18572456 | Sensitive | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6046210 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR3797048 | Other | La3;lineage4.9 | None | SAMN02381037 | MDR-TB | lineage4.6.1.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | SRR16156775 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | ERR4816964 | Sensitive | lineage4.9 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR1049630 | MDR-TB | lineage4.4.1.1 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR4818583 | Other | lineage4.3.3 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | ERR5311077 | Other | La1.8.1 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4821746 | Sensitive | lineage4.4.1.1 | gb | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1062895 | Sensitive | lineage4.6.1.1 | None | ERR4818407 | Other | lineage4.3.2 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR4815556 | RR-TB | lineage3 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR323035 | Sensitive | lineage4.9 | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR5979407 | Other | lineage3 | None | SRR1173281 | Other | lineage3 | None | SRR16156804 | Sensitive | lineage4.9 | None | SRR18002887 | MDR-TB | lineage2.2.1.1 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR4819655 | Other | lineage4.8 | None |
|---|
