EBG00000313339 - n.2946G>T


Drug resistance types
8 Sensitive 35 RR-TB 7 HR-TB 24 MDR-TB 18 Pre-XDR-TB 0 XDR-TB 96 Other
lineage Counts
lineage Count
lineage2.2.1 23
lineage3 25
lineage4.8 12
lineage4.1.1.3 2
lineage2.2.1.1 3
lineage4.1.2.1 16
lineage4.1.3 2
lineage4.9 24
lineage1.1.3.1 3
lineage4.9;lineage3.1.1 1
lineage4.1 1
lineage5 2
lineage2.2 1
lineage1.2.1.1 1
lineage3.1.3 1
lineage3.1 1
lineage4.3.3 4
lineage4.6.1.2 1
lineage4.3.4.2 1
lineage4.2.1.1 1
lineage1 2
lineage2.2.2 4
lineage3.1.2.1 1
lineage4.1.1 1
lineage4.2.2.2 1
lineage4.1.1.3.1 1
lineage4.8.2 1
lineage4.4.1.1 6
lineage1.2.2.2 2
lineage4.6.2.2 1
lineage4.3.4.1 3
lineage4 5
lineage3.1.1 3
6
lineage4.3.4.2.1 5
lineage1.1.1 1
lineage1.1.2 2
lineage4.7 2
lineage1.1.1.1 1
lineage4.1.2 1
lineage4.6.5 1
lineage4.9.1 1
La1.8.1 1
lineage4.6.1.1 1
lineage4.4.2 1
lineage4.3.2.1 1
lineage4.2.2 2
lineage4.4.1.2 1
lineage4.6 1
lineage4.4.1.1;lineage4.1.2.1 1
lineage4.8.1 1
La1.6 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 188
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR18003042 Other lineage2.2.1 None
SRR18003049 Other lineage2.2.1 None
SRR18213726 Other lineage3 None
SRR19303820 RR-TB lineage4.8 None
SRR18911231 Sensitive lineage4.1.1.3 None
SRR18909918 Other lineage2.2.1.1 None
ERR4814748 Other lineage4.8 None
SRR21240161 Sensitive lineage4.1.2.1 None
SRR21727760 Other lineage2.2.1 None
ERR4815780 MDR-TB lineage4.1.3 None
ERR4814714 Other lineage3 None
ERR4815777 Other lineage4.9 None
ERR4814617 Other lineage1.1.3.1 None
ERR171142 Other lineage4.9;lineage3.1.1 None
SRR3675230 RR-TB lineage3 None
ERR4814763 Other lineage2.2.1 None
ERR4814896 Other lineage2.2.1.1 None
ERR4815502 Other lineage4.1 None
ERR4816967 RR-TB lineage5 None
ERR4815901 Other lineage2.2 None
SRR3675509 Other lineage4.9 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR2027220 Other lineage3.1.3 None
ERR2027290 RR-TB lineage3.1 None
ERR4816101 Other lineage4.1.2.1 None
ERR2027257 Other lineage4.1.2.1 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4816310 HR-TB lineage4.6.1.2 None
ERR2446070 Sensitive lineage4.8 None
ERR4816493 Other lineage4.1.2.1 None
SRR3675552 RR-TB lineage4.9 None
ERR4816510 Other lineage4.1.2.1 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816782 Other lineage4.1.2.1 None
ERR4815811 HR-TB lineage4.2.1.1 None
ERR4818988 Other lineage1 None
ERR4816425 Other lineage2.2.2 None
ERR4818064 Other lineage4.8 None
ERR4817874 Other lineage3 None
ERR4817948 Other lineage3 gb
ERR4819011 Other lineage3.1.2.1 None
ERR4819017 RR-TB lineage3 None
ERR4818126 RR-TB lineage1 None
ERR4818173 Other lineage2.2.1 None
ERR4818176 Other lineage4.1.2.1 None
ERR4818259 RR-TB lineage4.1.1 None
ERR4818538 Other lineage3 gb
ERR4818904 Other lineage4.8 None
ERR4818522 Pre-XDR-TB lineage3 None
ERR4818869 Other lineage4.2.2.2 None
ERR4818393 RR-TB lineage3 None
ERR4818536 Other lineage4.9 None
ERR4818570 Other lineage4.3.3 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
SRR5007204 Other lineage4.1.2.1 None
SRR5007165 MDR-TB lineage3 None
SRR5007169 RR-TB lineage4.8.2 None
SRR5007170 RR-TB lineage4.9 None
ERR4817584 MDR-TB lineage3 None
ERR2446154 Sensitive lineage4.4.1.1 nl
SRR5341365 Pre-XDR-TB lineage3 None
ERR4819096 Other lineage4.4.1.1 None
ERR4819217 Other lineage1.2.2.2 None
ERR4819329 Sensitive lineage4.6.2.2 None
ERR4819265 HR-TB lineage4.3.4.1 None
ERR3275615 Sensitive lineage4.4.1.1 nl
ERR4819383 RR-TB lineage4.9 None
ERR4820324 Other lineage4 None
ERR4820334 Other lineage4.4.1.1 gb
ERR4819414 Other lineage1.1.3.1 gb
ERR4819655 Other lineage4.8 None
ERR4819456 Other lineage4.8 None
ERR4819462 Other lineage4 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
ERR4819525 Other lineage3 None
ERR4819834 Other lineage4.8 gb
ERR4819772 RR-TB lineage1.1.3.1 None
ERR4819784 Other lineage4.1.2.1 None
ERR4820030 Other lineage4.9 None
ERR4819863 RR-TB lineage4.9 None
ERR4819948 Other lineage4.4.1.1 None
ERR4820833 HR-TB None
ERR4820019 Other lineage4.3.4.2.1 None
ERR4820161 Other lineage3 None
ERR4820076 Other lineage1.1.1 gb
ERR4820151 RR-TB lineage4.8 None
ERR4820922 Other lineage4.1.2.1 gb
ERR4821769 Other lineage4.1.2.1 None
ERR4820959 Other lineage4.1.2.1 None
ERR4821172 RR-TB lineage4.9 None
SRR6045424 Other lineage1.1.2 None
SRR6046117 RR-TB lineage4.9 None
ERR4821288 Other lineage4.7 None
ERR4821214 RR-TB None
ERR4821245 Other lineage4.1.2.1 None
ERR4821334 RR-TB lineage4.1.3 None
ERR4821310 Other lineage5 None
ERR4822004 Other lineage1.1.1.1 gb
ERR4821981 Other lineage4.1.2.1 None
ERR4821409 Other lineage4.8 None
ERR4821341 Other lineage4.3.4.1 None
SRR6045603 RR-TB lineage4.1.1.3 None
ERR4821679 Other lineage4.3.3 None
ERR4822200 Other lineage4.3.4.1 gb
SRR6044769 Other lineage1.1.2 None
SRR6045384 Other lineage4.1.2 None
SRR6044817 Other lineage3 None
SRR6044936 Other lineage4 None
SRR6046020 Other lineage3 None
SRR6045909 Other lineage4.8 None
SRR6045267 RR-TB lineage4 None
ERR2851359 Other lineage4.9 None
SRR6046275 Other lineage3.1.1 None
SRR6046359 Other lineage4.7 None
SRR6046815 Other lineage3 None
SRR6046729 Other None
SRR6046484 Other lineage1.2.2.2 None
SRR6046848 Other lineage4.6.5 None
ERR502478 RR-TB lineage4.9 None
SRR6046852 MDR-TB lineage3 None
ERR502474 Pre-XDR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
SRR7131287 Other lineage2.2.1.1 None
ERR502479 RR-TB lineage4.9 None
ERR502481 Pre-XDR-TB lineage4.9 None
SRR6982415 HR-TB lineage4.9.1 None
ERR5311077 RR-TB La1.8.1 None
SRR7131147 Other lineage4.1.2.1 None
SRR9971122 MDR-TB lineage4.8 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR8651633 Pre-XDR-TB lineage4.4.2 None
SRR10315464 MDR-TB lineage4.4.1.1 None
SRR9971168 Other lineage4.3.2.1 None
DRR188816 Sensitive lineage4.2.2 None
ERR126597 MDR-TB lineage4.4.1.2 None
ERR9117704 Other lineage4.6 None
ERR9117740 Other lineage3.1.1 None
ERR10796589 Other lineage4.9 None
ERR6197022 Other lineage4.9 None
ERR9117788 Other lineage3 None
SRR10315556 Sensitive lineage2.2.1 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1049672 Other lineage3 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1173170 Other lineage4.9 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1172260 MDR-TB lineage4.8.1 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1062928 RR-TB lineage4 None
SRR10993951 RR-TB La1.6 None
SRR1173281 RR-TB lineage3 None
SRR1173310 MDR-TB None
SRR1173740 Other None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR1173719 HR-TB lineage3 None
SRR1181161 Other lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR1180252 Other lineage4.9 None
SRR16370329 HR-TB lineage4.5 None
SRR1181250 Other lineage4.9 None
SRR14801652 MDR-TB lineage4.3.3 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18002874 MDR-TB lineage2.2.1 None
SRR1735596 RR-TB lineage4.9 None
SRR18002891 MDR-TB lineage2.2.1 None
SRR18002981 Other lineage2.2.1 None
SRR18002945 RR-TB lineage2.2.1 None
SRR18002947 MDR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002994 MDR-TB lineage4.2.2 None
SRR18002984 MDR-TB lineage2.2.2 None
SRR18002998 Pre-XDR-TB lineage2.2.2 None
SRR18003004 Pre-XDR-TB lineage2.2.2 None
SRR18003024 RR-TB lineage2.2.1 None
SRR18003002 MDR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003012 Pre-XDR-TB lineage2.2.1 None
SRR18003030 Pre-XDR-TB lineage2.2.1 None
SRR18003015 MDR-TB lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18003032 Other lineage2.2.1 None