Rv0668 - c.1140G>C
Drug resistance types
16 Sensitive
21 RR-TB
9 HR-TB
16 MDR-TB
6 Pre-XDR-TB
1 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 15 |
| lineage4.3.2.1 | 3 |
| lineage4.1.1.3 | 4 |
| lineage4.8 | 7 |
| lineage4.1.1.1 | 2 |
| lineage1.2.2 | 1 |
| lineage4.3.3 | 2 |
| lineage4.3.4.2 | 1 |
| lineage2.2.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1 | 16 |
| lineage3 | 8 |
| lineage2.2.1.1 | 1 |
| La1.8.1 | 3 |
| lineage3.1.2.1 | 1 |
| lineage4.8.1 | 2 |
| lineage4.2.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2 | 3 |
| La1.4 | 1 |
| lineage4 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.4.1.1.1 | 2 |
| lineage3.1.1 | 1 |
| lineage4.7 | 1 |
| La3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 88 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR867573 | Other | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR11342686 | MDR-TB | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR4818126 | Other | lineage1.2.2 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR3275190 | Other | lineage3 | nl | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR323037 | Other | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR736831 | Other | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR867567 | RR-TB | lineage3 | None | ERR8975478 | Sensitive | lineage2.2.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR323048 | Sensitive | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR1735598 | RR-TB | lineage4.9 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR1063855 | Other | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4821811 | Sensitive | lineage4.9 | None | ERR2515352 | Sensitive | lineage2.2.1 | None | ERR867570 | RR-TB | lineage4.9 | None | SRR1792025 | Other | La1.8.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR773806 | Sensitive | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR11342682 | Other | lineage4.1.2 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR867554 | Other | lineage4.3.4.1 | None | ERR4816470 | HR-TB | lineage3 | None | SRR7496471 | Sensitive | lineage4 | None | ERR2027290 | Other | lineage3.1.2.1;lineage4.9 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR2517457 | Sensitive | lineage3 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | ERR1023494 | Sensitive | lineage3 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR4820410 | RR-TB | lineage3.1.1 | None | ERR4821276 | Sensitive | lineage3 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | ERR2446509 | Other | lineage3 | nl |
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