Rv0668 - c.1140G>C
Drug resistance types
35 Sensitive
110 RR-TB
9 HR-TB
11 MDR-TB
12 Pre-XDR-TB
1 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1 | 1 |
| lineage3 | 20 |
| lineage4.4.1.1 | 3 |
| lineage3.1.2.1 | 1 |
| lineage6 | 1 |
| lineage4.1.2.1 | 8 |
| lineage1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.1.3.1 | 4 |
| lineage4.9 | 112 |
| lineage4.8.2 | 1 |
| lineage2.2.1 | 14 |
| lineage4 | 7 |
| lineage4;lineage3.1.2.1 | 1 |
| lineage3.1.1 | 3 |
| lineage1.1.3.1 | 3 |
| 9 | |
| lineage4.3.4.2 | 1 |
| lineage4.8 | 7 |
| lineage4.1.2 | 4 |
| lineage4.3.4.2.1 | 5 |
| lineage2.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.2.1 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.7 | 2 |
| lineage1.1.2 | 2 |
| lineage4.3.1 | 1 |
| lineage4.3.1.1 | 1 |
| lineage5.1.1 | 1 |
| lineage4.4.2 | 1 |
| La1.8.1 | 4 |
| La1.3 | 3 |
| lineage4.9;La1.3 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.3.2.1 | 1 |
| lineage4.3.4.1 | 1 |
| La1.4 | 1 |
| lineage2.2.2 | 1 |
| lineage4.9;lineage3.1.1 | 1 |
| lineage4.1 | 1 |
| lineage3.1 | 1 |
| lineage4.6.1.2 | 1 |
| lineage4.6.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 242 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4817703 | Other | lineage1.1.1 | None | ERR2512986 | Other | lineage3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4818787 | MDR-TB | lineage6 | None | ERR4818065 | Other | lineage4.1.2.1 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4818126 | RR-TB | lineage1 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4817555 | RR-TB | lineage3 | None | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR2509886 | RR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR5007170 | RR-TB | lineage4.9 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR4818977 | RR-TB | lineage4.1.2.1 | None | SRR5341365 | Pre-XDR-TB | lineage3 | None | ERR4820746 | RR-TB | lineage3 | None | ERR2515352 | Sensitive | lineage2.2.1 | None | ERR4820723 | RR-TB | lineage4.4.1.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR4820324 | Other | lineage4 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4820959 | Other | lineage4.1.2.1 | None | ERR4819864 | RR-TB | lineage1.1.3.1 | None | ERR4820833 | HR-TB | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | ERR4820151 | RR-TB | lineage4.8 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR2517457 | Sensitive | lineage3 | None | SRR6045516 | Other | lineage3.1.1 | None | ERR4821408 | Sensitive | lineage4.1.2 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821915 | RR-TB | lineage4.9 | None | ERR4821214 | RR-TB | None | ERR4821276 | Other | lineage3 | None | SRR6046117 | RR-TB | lineage4.9 | None | ERR4821568 | Other | lineage4.3.4.2.1 | None | ERR4821572 | Other | lineage2.1 | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR4821712 | HR-TB | None | ERR4821679 | Other | lineage4.3.3 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SRR6045655 | Other | lineage4.1.1.3.1 | None | SRR5818647 | RR-TB | lineage4.3.4.2.1 | None | SRR5818685 | Sensitive | None | SRR6046359 | Other | lineage4.7 | None | SRR6044936 | Other | lineage4 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044983 | Other | lineage3.1.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045424 | Other | lineage1.1.2 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR2851359 | Other | lineage4.9 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6046616 | Other | lineage4.3.1.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872269 | XDR-TB | lineage2.2.1 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | SRR7645906 | Other | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | SRR7496523 | Other | lineage4.7 | None | ERR3275190 | Other | lineage3 | nl | SRR7645927 | Other | lineage4.8 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR1023494 | Sensitive | lineage3 | None | ERR3283015 | Sensitive | lineage4.9 | None | ERR3283049 | Sensitive | lineage4.9 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR3797084 | Sensitive | lineage4.9 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR405190 | Sensitive | lineage4.9 | None | ERR773806 | Sensitive | lineage2.2.1 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR6359066 | HR-TB | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR8975478 | Sensitive | lineage2.2.1.1 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR13861138 | RR-TB | lineage4.9 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR13861140 | MDR-TB | lineage4.9 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR13861152 | Sensitive | lineage4.9 | None | SRR13861154 | RR-TB | lineage4.9 | None | SRR13861170 | RR-TB | lineage4.9 | None | SRR13861186 | Other | lineage4.9 | None | SRR13861169 | RR-TB | lineage4.9 | None | SRR13861197 | RR-TB | lineage4.9 | None | SRR13861199 | RR-TB | lineage4.9 | None | SRR13861200 | Other | lineage4.9 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861202 | RR-TB | lineage4.9 | None | SRR13861222 | RR-TB | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861232 | RR-TB | lineage4.9 | None | SRR13861245 | RR-TB | lineage4.9 | None | SRR13861262 | RR-TB | lineage4.9 | None | SRR13861261 | Sensitive | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861267 | Other | lineage4.9 | None | SRR13861281 | Other | lineage4.9 | None | SRR13861277 | RR-TB | lineage4.9 | None | SRR13861282 | RR-TB | lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | SRR13861292 | RR-TB | lineage4.9 | None | SRR13861310 | RR-TB | lineage4.9 | None | SRR13861320 | RR-TB | lineage4.9 | None | SRR13861338 | Sensitive | lineage4.9 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861337 | RR-TB | lineage4.9 | None | SRR13861357 | RR-TB | lineage4.9 | None | SRR13861389 | Other | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861375 | Other | lineage4.9 | None | SRR13861386 | HR-TB | lineage4.9 | None | SRR13861385 | Sensitive | lineage4.9 | None | SRR13861393 | Sensitive | lineage4.9 | None | SRR13861406 | MDR-TB | lineage4.9 | None | SRR13861443 | RR-TB | lineage4.9 | None | SRR13861408 | MDR-TB | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861451 | RR-TB | lineage4.9 | None | SRR13861450 | RR-TB | lineage4.9 | None | SRR13861458 | MDR-TB | lineage4.9 | None | SRR13861456 | Sensitive | lineage4.9 | None | SRR13861463 | Other | lineage4.9 | None | SRR13861474 | Sensitive | lineage4.9 | None | SRR13861486 | Other | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861481 | RR-TB | lineage4.9 | None | SRR13861488 | RR-TB | lineage4.9 | None | SRR13861494 | Other | lineage4.9 | None | SRR13861503 | Other | lineage4.9 | None | SRR13861495 | MDR-TB | lineage4.9 | None | SRR13861513 | RR-TB | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861520 | RR-TB | lineage4.9 | None | SRR13861524 | RR-TB | lineage4.9 | None | SRR13861543 | RR-TB | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13861563 | RR-TB | lineage4.9 | None | SRR13861560 | RR-TB | lineage4.9 | None | SRR13861561 | RR-TB | lineage4.9 | None | SRR13861570 | Other | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861585 | RR-TB | lineage4.9 | None | SRR13861603 | RR-TB | lineage4.9 | None | SRR13861590 | RR-TB | lineage4.9 | None | SRR13861618 | RR-TB | lineage4.9 | None | SRR13861632 | MDR-TB | lineage4.9 | None | SRR13861631 | RR-TB | lineage4.9 | None | SRR13861638 | Sensitive | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861650 | Sensitive | lineage4.9 | None | SRR13861662 | RR-TB | lineage4.9 | None | SRR13861663 | Sensitive | lineage4.9 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR13861699 | Sensitive | lineage4.9 | None | SRR13861701 | RR-TB | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SRR13861722 | RR-TB | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR13861730 | Sensitive | lineage4.9 | None | SRR15508556 | Other | lineage4.3.4.1 | None | SRR13861737 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR1792011 | Other | La1.8.1 | None | SRR1792022 | Other | La1.8.1 | None | SRR1792025 | Other | La1.8.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR18002998 | Pre-XDR-TB | lineage2.2.2 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR19303820 | RR-TB | lineage4.8 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | ERR4815394 | RR-TB | lineage4.2.1 | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR161014 | Sensitive | lineage4.3.4.2.1 | None | ERR4814496 | RR-TB | lineage4.1.2 | None | ERR2446544 | Sensitive | lineage3 | nl | ERR171142 | Other | lineage4.9;lineage3.1.1 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR1750907 | RR-TB | None | ERR4814841 | Other | lineage4.1 | None | ERR4814748 | Other | lineage4.8 | None | ERR4815528 | Other | lineage4.8 | None | ERR4815909 | Other | lineage4.8 | None | SRR3675510 | Other | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4816270 | Other | lineage4.1.2.1 | None | ERR4815994 | Other | lineage3 | gb | ERR2027290 | RR-TB | lineage3.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR3275548 | Sensitive | lineage3 | nl | ERR4816300 | Other | lineage4.1.2.1 | None | ERR4816310 | HR-TB | lineage4.6.1.2 | None | ERR4816397 | Other | lineage1.1.2 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816470 | Other | lineage3 | None | ERR4817131 | Pre-XDR-TB | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR2446509 | Other | lineage3 | nl | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816756 | RR-TB | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816755 | Other | lineage4.1.1.3 | None |
|---|
