lineage | Count |
---|---|
lineage4.9 | 13 |
lineage4.8 | 24 |
1 | |
lineage2.2.1 | 8 |
lineage4.8.1 | 2 |
lineage4.2.1 | 2 |
La1.6 | 1 |
lineage2.2;lineage4 | 1 |
lineage3 | 1 |
lineage4.6.1.1 | 1 |
lineage4.4.1.1.1 | 2 |
lineage3.1.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4.1.3 | 1 |
lineage4.3.4.2 | 1 |
lineage4.4.1.1 | 2 |
lineage4.6.5 | 1 |
lineage4.2.2.2 | 1 |
lineage4.1.1.1 | 2 |
lineage4.3.3 | 2 |
lineage2;lineage4 | 1 |
lineage4.4 | 1 |
lineage2.2.1;lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 71 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR502470 | RR-TB | lineage4.9 | None |
ERR4819863 | RR-TB | lineage4.9 | None |
SAMEA3501070 | RR-TB | lineage4.8 | None |
SAMEA3501052 | RR-TB | lineage4.8 | None |
ERR4817069 | RR-TB | None | |
SRR9971122 | MDR-TB | lineage4.8 | None |
SRR18003024 | RR-TB | lineage2.2.1 | None |
SRR11342693 | MDR-TB | lineage4.8.1 | None |
SAMEA3501063 | RR-TB | lineage4.8 | None |
SRR11342662 | MDR-TB | lineage4.8.1 | None |
SRR14782539 | MDR-TB | lineage4.2.1 | None |
SRR18002874 | MDR-TB | lineage2.2.1 | None |
SRR10993951 | RR-TB | La1.6 | None |
SRR15315797 | RR-TB | lineage2.2.1 | None |
ERR978765 | RR-TB | lineage4.8 | None |
ERR502481 | RR-TB | lineage4.9 | None |
ERR502474 | RR-TB | lineage4.9 | None |
ERR4769554 | RR-TB | lineage4.9 | None |
SRR16156832 | RR-TB | lineage2.2;lineage4 | None |
ERR867567 | RR-TB | lineage3 | None |
ERR502473 | RR-TB | lineage4.9 | None |
ERR4813263 | MDR-TB | lineage4.8 | None |
ERR978766 | RR-TB | lineage4.8 | None |
SRR7535047 | RR-TB | lineage4.6.1.1 | None |
SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None |
SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None |
ERR9285979 | RR-TB | lineage3.1.1 | None |
SRR16156697 | RR-TB | lineage2.2.1 | None |
SRR11342647 | MDR-TB | lineage4.1.1.3 | None |
ERR978754 | RR-TB | lineage4.8 | None |
SRR1735598 | RR-TB | lineage4.9 | None |
SAMEA3501067 | RR-TB | lineage4.8 | None |
ERR978757 | RR-TB | lineage4.8 | None |
ERR978734 | RR-TB | lineage4.8 | None |
SRR11342671 | RR-TB | lineage4.1.3 | None |
SRR11342673 | RR-TB | lineage4.3.4.2 | None |
SRR17567917 | RR-TB | lineage4.4.1.1 | None |
SRR18003030 | Pre-XDR-TB | lineage2.2.1 | None |
ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None |
SRR18002941 | RR-TB | lineage2.2.1 | None |
SRR1735596 | RR-TB | lineage4.9 | None |
SAMEA3501073 | RR-TB | lineage4.8 | None |
ERR4821172 | RR-TB | lineage4.9 | None |
ERR7801176 | RR-TB | lineage4.6.5 | None |
SRR11342687 | RR-TB | lineage4.2.2.2 | None |
SRR11342642 | MDR-TB | lineage4.1.1.1 | None |
SAMEA3501065 | RR-TB | lineage4.8 | None |
ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None |
SRR11342651 | MDR-TB | lineage4.1.1.1 | None |
ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None |
SRR11342660 | MDR-TB | lineage2.2.1 | None |
ERR502479 | RR-TB | lineage4.9 | None |
ERR502478 | RR-TB | lineage4.9 | None |
SRR11342636 | MDR-TB | lineage4.3.3 | None |
ERR978767 | RR-TB | lineage4.8 | None |
ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None |
ERR3797062 | RR-TB | lineage4.9 | None |
ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None |
ERR978726_ERR978727 | RR-TB | lineage4.8 | None |
ERR1023502 | MDR-TB | lineage2;lineage4 | None |
SAMEA3501046 | RR-TB | lineage4.8 | None |
ERR867570 | RR-TB | lineage4.9 | None |
ERR978750 | RR-TB | lineage4.8 | None |
ERR978755 | RR-TB | lineage4.8 | None |
SRR11342649 | MDR-TB | lineage4.3.3 | None |
ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None |
SRR16627752 | RR-TB | lineage4.4 | None |
ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None |
ERR867523 | Pre-XDR-TB | lineage2.2.1 | None |
ERR867541 | MDR-TB | lineage4.2.1 | None |
SRR11342698 | RR-TB | lineage4.4.1.1 | None |