EBG00000313325 - n.485G>T
Drug resistance types
5 Sensitive
13 RR-TB
9 HR-TB
5 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
50 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 25 |
| lineage1.2.1.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4.1.2.1 | 3 |
| lineage1.1.1 | 1 |
| lineage2.2.1 | 7 |
| lineage4.8 | 9 |
| 1 | |
| lineage3.1.3 | 1 |
| lineage4 | 5 |
| lineage3.1.2.1 | 2 |
| lineage3 | 8 |
| lineage4.4.1.1 | 3 |
| lineage4.1.1.3.1 | 1 |
| lineage4.8.2 | 1 |
| lineage4.5 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.3.3 | 3 |
| lineage4.2.1 | 1 |
| lineage4.7 | 1 |
| lineage5.1.1 | 1 |
| lineage4.6 | 1 |
| lineage4.1.2 | 1 |
| La1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage1.2.2.2 | 1 |
| lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 85 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR16156775 | Other | lineage4.9 | None | SRR12006547 | Sensitive | lineage1.2.1.2.1 | None | ERR4815143 | HR-TB | lineage4.2.2.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR21240055 | Other | lineage4.1.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | ERR4814623 | Other | lineage4.8 | None | ERR4815310 | Other | None | ERR2027220 | Other | lineage3.1.3 | None | ERR4815550 | Other | lineage4 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR4816417 | Other | lineage4.9 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR2229234 | RR-TB | lineage4.8 | None | ERR2446509 | Other | lineage3 | nl | ERR4816800 | Other | lineage4.8 | gb | ERR216965 | HR-TB | lineage4.9 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816868 | Other | lineage4.4.1.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | ERR4818831 | Other | lineage3 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | SRR5007168 | RR-TB | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR2514215 | Other | lineage2.2.1 | gb | ERR4820266 | RR-TB | lineage3 | None | ERR2514173 | Other | lineage4.5 | gb | ERR4817584 | MDR-TB | lineage3 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4819555 | Other | lineage4.8 | None | ERR4822261 | RR-TB | lineage2.2.1 | None | ERR2514943 | Other | lineage4.8 | gb | ERR4820193 | Other | lineage3 | None | ERR4822035 | Other | lineage4.8 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4820829 | Other | lineage4.8 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR5818394 | Other | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR5818400 | Other | lineage4.9 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818452 | Other | lineage4.9 | None | SRR5818425 | Other | lineage4.9 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818464 | Other | lineage4.9 | None | SRR5818459 | Other | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | ERR3275190 | Other | lineage3 | nl | SRR6832644 | Other | lineage4.3.3 | None | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | ERR10796576 | RR-TB | lineage4.9 | None | ERR10796565 | RR-TB | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | ERR10796580 | RR-TB | lineage4.6 | None | ERR10796597 | Other | lineage4 | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR10796629 | Other | lineage4 | None | ERR10796626 | Other | lineage4.1.2 | None | ERR4769418 | Other | La1.2 | None | ERR10796633 | RR-TB | lineage4.3.4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4769444 | HR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | ERR9117827 | Other | lineage1.2.2.2 | None | ERR9787336 | Other | lineage6 | None |
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