lineage | Count |
---|---|
lineage4.1.1.1 | 2 |
lineage4.1.2.1 | 2 |
lineage2.2;lineage4.9 | 1 |
lineage1.1.1 | 1 |
lineage4.9 | 25 |
lineage2.2.1 | 5 |
lineage4.3.3 | 3 |
lineage4.8 | 5 |
lineage4.4.1.1.1 | 2 |
La1.8.1 | 3 |
lineage6.1.3 | 1 |
lineage4.4.1.1 | 1 |
lineage4.1.2 | 1 |
lineage3 | 2 |
lineage1.2.1.2 | 1 |
lineage4.1.1.3 | 1 |
La1.2 | 1 |
lineage2.2.1;lineage4.9 | 1 |
lineage4.8.1 | 2 |
lineage4.2.1 | 1 |
lineage4.3.4.2 | 1 |
lineage2.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 63 |
ID | Drug resistance | Lineage | Country iso2 | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR21658550 | Other | lineage1.1.1 | None | ERR867574 | Other | lineage4.9 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | SRR5818464 | Other | lineage4.9 | None | ERR978767 | RR-TB | lineage4.8 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | SRR1202573 | Other | lineage4.9 | None | SRR5818408 | Other | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | SRR18003031 | HR-TB | lineage2.2.1 | None | SRR7236399 | Other | La1.8.1 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR5818394 | Other | lineage4.9 | None | SRR7617847 | Other | La1.8.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR11342682 | Other | lineage4.1.2 | None | SRR16156775 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR5818399 | Sensitive | lineage4.9 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SRR5818425 | Other | lineage4.9 | None | ERR10796578 | Other | lineage2.2.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | SRR5818452 | Other | lineage4.9 | None | SRR1209087 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | SRR5818424 | Sensitive | lineage4.9 | None | SRR5818428 | Sensitive | lineage4.9 | None | SRR5818470 | Other | lineage4.9 | None | SRR5818389 | Other | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1202528 | Sensitive | lineage4.9 | None | SRR5818414 | Other | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR5818400 | Other | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR7236330 | Other | La1.8.1 | None | ERR9786076 | Sensitive | lineage3 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR5818459 | Other | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR10796564 | Other | lineage4.3.3 | None | ERR10796633 | Other | lineage4.3.4.2 | None | SRR18909918 | Other | lineage2.2.1.1 | None |
---|