EBG00000313325 - n.845C>A
Drug resistance types
55 Sensitive
44 RR-TB
39 HR-TB
34 MDR-TB
22 Pre-XDR-TB
2 XDR-TB
514 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 20 |
| lineage4.3.4.2.1 | 7 |
| lineage4.3.1.1 | 9 |
| lineage2.2.2 | 2 |
| lineage4.5 | 13 |
| lineage4.6.2.2 | 11 |
| lineage2.2.1 | 86 |
| lineage4.1.1.3 | 18 |
| lineage1.1.2 | 20 |
| lineage4.1.1.2 | 7 |
| lineage4.8 | 50 |
| lineage3.1.1 | 11 |
| lineage4.3.3 | 21 |
| lineage4.1.2.1 | 68 |
| lineage3 | 102 |
| lineage4.1.1.1 | 10 |
| M.bovis | 3 |
| lineage4.1.1.3.1 | 12 |
| lineage4.2.1 | 9 |
| lineage4.9;lineage3.1.2 | 1 |
| lineage4.7 | 12 |
| lineage4.3.4.1 | 4 |
| lineage4 | 6 |
| lineage4.4.1.1 | 14 |
| lineage4.1.2 | 12 |
| lineage4.2.2 | 4 |
| lineage3.1.2.2 | 5 |
| lineage3.1.2.1 | 8 |
| lineage4.3.2.1 | 8 |
| lineage4.2.2.2 | 14 |
| lineage4.3.4.2 | 7 |
| M.orygis | 2 |
| lineage1.2.2.2 | 7 |
| lineage1.1.3.1 | 5 |
| lineage4.8.1 | 4 |
| lineage1.2.1.2.1 | 10 |
| lineage1.1.1.1 | 1 |
| lineage1.2.2.1 | 2 |
| lineage1.1.3 | 2 |
| lineage3.1.3 | 6 |
| lineage1 | 2 |
| lineage4.1.3 | 2 |
| lineage4.6.4 | 1 |
| lineage4.2.1.1 | 3 |
| lineage4.3.1 | 1 |
| lineage4.2 | 2 |
| lineage3.1.2 | 5 |
| lineage4.4.1.2 | 1 |
| lineage4.6 | 2 |
| lineage5.1.1 | 1 |
| lineage4.1 | 3 |
| lineage4.6.5 | 3 |
| lineage2.2.1.2 | 4 |
| lineage4.6.1.1 | 1 |
| lineage1.1.3.2 | 2 |
| lineage4.4.2 | 2 |
| lineage4.1.1 | 5 |
| lineage4.4 | 2 |
| lineage5.1.4 | 2 |
| lineage4.8.2 | 4 |
| lineage4.1.2;lineage3.1.1 | 1 |
| lineage4.8;lineage3 | 1 |
| lineage1.2.1.1 | 1 |
| lineage1.1.1 | 1 |
| lineage4.5;lineage4.4.2 | 1 |
| lineage2.2.1.1 | 5 |
| lineage1.1.3.3 | 1 |
| lineage6.3.1 | 3 |
| lineage4.3.2.1;lineage2.2.1 | 1 |
| La1.8.1 | 5 |
| lineage4.3.2 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage4;lineage3 | 1 |
| lineage4;lineage2.2.1 | 1 |
| 7 | |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage6.1.1 | 1 |
| lineage4.2.2.2;lineage3 | 1 |
| lineage3.1 | 2 |
| lineage2.2 | 1 |
| lineage4.1.4 | 1 |
| lineage6.3.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.8;lineage4.4.1.1.1 | 1 |
| La1.6 | 2 |
| lineage6.1.3 | 1 |
| lineage4.9;La1.8 | 1 |
| lineage2.2.1;lineage1.1.1 | 1 |
| lineage6 | 1 |
| lineage4.3 | 1 |
| lineage1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 710 |
Geographic prevalence
Country level data for this variant is available for 256 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR10796574 | Other | lineage4.9 | None | ERR4820742 | Other | lineage4.3.4.2.1 | None | SRR6046016 | Other | lineage4.3.1.1 | gb | ERR4808980 | Pre-XDR-TB | lineage2.2.2 | None | ERR2179785 | Sensitive | lineage4.5 | None | SRR6045445 | Other | lineage4.3.1.1 | None | ERR4814399 | Other | lineage4.6.2.2 | gb | ERR4814901 | Other | lineage2.2.1 | gb | ERR4819175 | Other | lineage4.1.1.3 | gb | ERR4815795 | Other | lineage1.1.2 | None | SRR8651617 | Pre-XDR-TB | lineage4.5 | None | ERR2514173 | Other | lineage4.5 | gb | SRR3675496 | Other | lineage4.1.1.3 | gb | ERR2513929 | Other | lineage4.1.1.2 | None | ERR2513924 | RR-TB | lineage4.8 | None | SRR6045894 | Other | lineage4.8 | None | ERR2515668 | Sensitive | lineage4.9 | za | SRR6046766 | Other | lineage3.1.1 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4820926 | Other | lineage4.8 | gb | ERR4817508 | Other | lineage4.1.2.1 | gb | SRR6045876 | Other | lineage3 | gb | ERR4817342 | Other | lineage4.1.1.1 | None | ERR4820846 | RR-TB | lineage4.6.2.2 | gb | SRR6046246 | Other | lineage3 | None | SRR18391683 | Other | M.bovis | None | SRR6045178 | Other | lineage3 | None | SRR3675361 | Other | lineage1.1.2 | gb | ERR4818671 | Other | lineage4.8 | gb | ERR4821659 | HR-TB | lineage2.2.1 | gb | ERR4816649 | Other | lineage3 | None | SRR6824624 | Sensitive | lineage2.2.1 | None | SRR5007171 | Other | lineage2.2.1 | None | SRR6044946 | Other | lineage4.1.2.1 | gb | ERR4815783 | Other | lineage4.1.2.1 | gb | ERR4816681 | Other | lineage4.1.2.1 | gb | ERR4819196 | Other | lineage4.1.1.1 | gb | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | ERR2514515 | Other | lineage4.2.1 | None | SRR6045547 | Sensitive | lineage4.9;lineage3.1.2 | gb | SRR6046646 | Other | lineage4.7 | gb | ERR3148213 | Pre-XDR-TB | lineage4.3.4.1 | mx | ERR4815089 | HR-TB | lineage2.2.1 | gb | ERR2513401 | HR-TB | lineage3 | None | ERR4819007 | Other | lineage2.2.1 | None | ERR4818274 | Other | lineage4 | None | ERR4816800 | Other | lineage4.8 | gb | SRR6046534 | Other | lineage1.1.2 | None | SRR6044958 | Other | lineage4.4.1.1 | None | ERR4818401 | HR-TB | lineage2.2.1 | gb | SRR3675556 | Other | lineage3 | None | ERR4818556 | Other | lineage3 | None | ERR2512986 | Other | lineage3 | None | ERR4819181 | Other | lineage3 | gb | ERR4817357 | HR-TB | lineage3 | gb | ERR4820132 | Other | lineage4.1.2 | None | SRR6153221 | Other | lineage4.2.2 | ca | SRR6045485 | Other | lineage4.9 | None | ERR4819017 | RR-TB | lineage3 | None | ERR4820969 | Sensitive | lineage2.2.1 | gb | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4822222 | Other | lineage3.1.2.2 | None | ERR2513440 | Other | lineage4.1.1.3 | None | SRR6046440 | Other | lineage3.1.2.2 | None | SRR6045335 | Other | lineage4.1.2.1 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR4816462 | Other | lineage4.1.2.1 | None | ERR4816300 | Other | lineage4.1.2.1 | None | SRR6045110 | Other | lineage3 | None | SRR5818663 | Sensitive | lineage4.1.2.1 | dj | ERR2515721 | Sensitive | lineage4.3.2.1 | None | SRR2101827 | Sensitive | lineage4.3.4.2.1 | None | SRR6046291 | Other | lineage3 | None | ERR3276005 | Other | lineage4.1.2.1 | nl | SRR3675565 | Other | lineage4 | None | ERR2510779 | Other | lineage4.2.2.2 | it | SRR6046790 | Other | lineage4.7 | None | ERR2514854 | Other | lineage4.3.3 | None | SRR6046779 | Other | lineage4.1.2.1 | gb | SRR6045843 | Other | lineage4.2.2.2 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4818023 | Other | lineage4.1.2 | gb | ERR4816184 | Other | lineage4.1.2.1 | None | ERR4819458 | Other | lineage4.1.1.3.1 | gb | ERR4814362 | Other | lineage4.8 | None | SRR2101540 | Sensitive | lineage4.3.2.1 | None | SRR6045849 | Other | lineage4.4.1.1 | None | SRR5007203 | Other | lineage2.2.1 | None | SRR6044975 | Other | lineage3 | gb | SRR2101353 | Sensitive | lineage4.8 | None | ERR2512841 | HR-TB | lineage2.2.1 | gb | SRR1735639 | Sensitive | lineage4.5 | gb | SRR6045464 | Other | lineage4.1.1.3 | None | ERR4818261 | Other | lineage1.1.2 | None | ERR4821579 | Other | lineage4.3.4.2 | gb | ERR2514692 | Other | M.orygis | None | ERR4821372 | Other | lineage4.1.2.1 | None | SRR6046517 | Other | lineage4.8 | None | ERR2514540 | Other | lineage3 | gb | SRR5818670 | Other | lineage4.1.2.1 | None | SRR6044937 | HR-TB | lineage4.3.4.2.1 | gb | SRR5818666 | Other | lineage3 | None | ERR4815641 | Other | lineage4.3.4.2 | gb | SRR2101685 | Sensitive | lineage4.9 | None | SRR6045056 | Other | lineage2.2.1 | gb | ERR2515007 | Other | lineage3 | None | ERR4821154 | Other | lineage2.2.1 | gb | ERR2514943 | Other | lineage4.8 | gb | ERR4818050 | Other | lineage4.6.2.2 | None | ERR2512941 | Other | lineage1.1.2 | None | SRR6398013 | Other | lineage4.1.2 | ca | ERR4817169 | Sensitive | lineage4.7 | gb | ERR4815771 | Other | lineage1.2.2.2 | gb | ERR4820019 | Other | lineage4.3.4.2.1 | None | SRR6045599 | Other | lineage4.8 | None | SRR18391772 | Other | M.bovis | None | SRR6045480 | Other | lineage4.1.1.1 | None | ERR4818471 | Other | lineage2.2.1 | None | ERR2513841 | Sensitive | lineage4.1.1.3.1 | gb | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR1465744 | Sensitive | lineage4.1.2.1 | None | SRR3675282 | Other | lineage3.1.2.1 | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR4814881 | Other | lineage2.2.1 | gb | ERR2514668 | Other | lineage4.8.1 | gb | ERR2513430 | Other | lineage4.1.2.1 | gb | ERR4817170 | Other | lineage4.1.2.1 | gb | ERR4816031 | Other | lineage4.3.3 | gb | ERR2514295 | HR-TB | lineage3 | gb | ERR4814442 | Other | lineage4.4.1.1 | None | SRR3675452 | Other | lineage3 | None | ERR2513949 | Other | lineage3 | gb | SRR3675230 | RR-TB | lineage3 | None | ERR4816314 | Other | lineage1.2.1.2.1 | gb | ERR4815178 | Other | lineage4.8 | gb | ERR4815496 | Other | lineage3 | gb | SRR6046612 | Other | lineage1.1.1.1 | None | ERR4819082 | Other | lineage1.1.2 | gb | ERR4816692 | Other | lineage4.1.2.1 | None | SRR6046343 | Other | lineage2.2.1 | None | SRR6045614 | Other | lineage4.8 | None | ERR2515148 | Sensitive | lineage4.3.3 | None | ERR4821449 | Other | lineage1.2.2.1 | gb | ERR4815319 | Other | lineage4.1.1.3 | gb | ERR2514514 | RR-TB | lineage3 | gb | ERR2514608 | Other | lineage1.1.3 | gb | SRR6045944 | Other | lineage4.1.2.1 | None | ERR4817545 | Other | lineage4.8 | gb | SRR6044857 | Other | lineage4.8.1 | gb | ERR4818726 | Other | lineage4.1.2.1 | None | SRR6046860 | Other | lineage4.4.1.1 | None | ERR4819782 | Other | lineage1.2.1.2.1 | gb | SRR3675252 | RR-TB | lineage1.1.2 | None | SRR6045805 | Other | lineage4.3.1.1 | None | ERR2510753 | Other | lineage4.8 | it | SRR2101529 | Sensitive | lineage4.3.2.1 | None | SRR6045797 | Other | lineage4.1.1.2 | gb | ERR4816969 | Other | lineage4.8 | None | SRR6046456 | Other | lineage4.1.1.3.1 | None | ERR4816437 | Other | lineage3 | gb | SRR6045164 | Other | lineage4.1.2.1 | None | SRR8651566 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821719 | Other | lineage3 | gb | SRR6046891 | Other | lineage4.7 | None | ERR4817086 | Other | lineage1.2.2.2 | gb | ERR4820328 | Other | lineage3 | gb | ERR2513904 | Other | lineage3.1.2.2 | gb | ERR2513589 | Other | lineage3.1.3 | None | ERR4819784 | Other | lineage4.1.2.1 | None | ERR2513356 | Other | lineage4.5 | gb | ERR4818988 | Other | lineage1 | None | ERR2513680 | Other | lineage3 | gb | ERR4822085 | Other | lineage4.8 | gb | SRR6045622 | Sensitive | lineage4.1.3 | gb | ERR4815413 | Other | lineage4.3.4.2.1 | None | ERR4820575 | Other | lineage3 | gb | ERR4818003 | Other | lineage1.2.1.2.1 | gb | ERR1679641 | Other | lineage4.6.4 | None | SRR6044983 | Other | lineage3.1.1 | None | ERR2513413 | Other | lineage3.1.2.1 | None | ERR4815080 | Other | lineage4.1.2.1 | None | ERR4816582 | Other | lineage4.1.1.3 | gb | ERR4818753 | Other | lineage3 | gb | ERR4821746 | Other | lineage4.4.1.1 | gb | ERR2513231 | RR-TB | lineage4.3.4.2 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4819522 | Other | lineage4.2.1 | gb | SRR5818626 | Sensitive | lineage4.1.2.1 | dj | SRR6398097 | Other | lineage4.2.1.1 | ca | SRR6153170 | Other | lineage4.9 | ca | ERR4820723 | RR-TB | lineage4.4.1.1 | None | SRR6045420 | Other | lineage4.1.2.1 | gb | SRR6046113 | Other | lineage4.1.1.3 | None | ERR4820188 | Other | lineage3 | gb | SRR3675562 | Other | lineage4.3.1 | None | ERR2179737 | HR-TB | lineage4.2 | None | SRR6045600 | Other | lineage3.1.2 | gb | SRR6046457 | Other | lineage3 | gb | SRR6824519 | MDR-TB | lineage2.2.1 | cn | ERR2514550 | MDR-TB | lineage3 | gb | ERR4819093 | Other | lineage4.3.3 | None | ERR4815917 | Other | lineage2.2.1 | gb | SRR6045199 | Other | lineage2.2.1 | None | ERR4815476 | HR-TB | lineage2.2.1 | gb | SRR5818644 | Sensitive | lineage4.2.2.2 | dj | ERR4816182 | Other | lineage3.1.2.1 | gb | SRR6045616 | Other | lineage4.4.1.2 | gb | SRR6153166 | Other | lineage1.2.1.2.1 | ca | ERR2514315 | Other | lineage3 | gb | ERR4817941 | Other | lineage4.8 | gb | ERR4815005 | Other | lineage4.1.2.1 | None | ERR4819734 | RR-TB | lineage3 | gb | SRR3675447 | Other | lineage3 | None | SRR6046484 | Other | lineage1.2.2.2 | None | ERR4820498 | HR-TB | lineage4.8 | gb | ERR2513975 | Other | lineage3 | gb | SRR6046177 | Other | lineage3.1.2 | None | SRR2101498 | Sensitive | lineage4.1.1.2 | None | ERR2513837 | Other | lineage4.1.2.1 | gb | ERR4821245 | Other | lineage4.1.2.1 | None | ERR2514181 | Other | lineage1.2.1.2.1 | None | SRR6046090 | HR-TB | lineage4.6 | gb | ERR2514673 | Other | lineage4.1.2.1 | gb | SRR6044873 | Other | lineage4.1.1.3.1 | None | ERR4814551 | Other | lineage4.1.2.1 | gb | SRR6046020 | Other | lineage3 | None | SRR6046679 | Other | lineage3 | gb | ERR502517 | MDR-TB | lineage5.1.1 | None | ERR2516042 | Other | lineage4.1.1.3 | za | SRR3675288 | Other | lineage3 | None | SRR6045565 | Other | lineage4.6.2.2 | None | ERR2513794 | Other | lineage4.8 | gb | ERR2514645 | Other | lineage4.3.4.1 | None | SRR5818586 | RR-TB | lineage4.2.2.2 | None | SAMN02585982 | MDR-TB | lineage4.3.3 | None | SRR5818690 | Other | lineage4.2.2.2 | None | SRR3675256 | Other | lineage4.7 | None | ERR4817426 | Other | lineage4.1 | gb | SRR5818612 | Other | lineage4.2.2.2 | None | ERR4820424 | Other | M.bovis | gb | ERR2514298 | Other | lineage1.2.1.2.1 | gb | ERR4820184 | MDR-TB | lineage3 | gb | ERR4817189 | Other | lineage4.7 | None | ERR4818432 | HR-TB | lineage4.5 | gb | ERR4822169 | Other | lineage4.1.1.3 | gb | SRR6046359 | Other | lineage4.7 | None | ERR4820941 | HR-TB | lineage3 | gb | ERR4816757 | Other | lineage2.2.1 | gb | ERR4816955 | Other | lineage4.3.3 | gb | SRR6045516 | Other | lineage3.1.1 | None | ERR4815680 | Other | lineage1.1.2 | gb | SRR6046752 | Sensitive | lineage4.2.2.2 | None | ERR4818810 | Other | lineage2.2.1 | None | SRR6046376 | Other | lineage3 | None | ERR2513273 | Other | lineage4.1.2.1 | None | ERR4817294 | Other | lineage4.1.2 | None | ERR4816009 | Other | lineage1.1.2 | None | ERR4816988 | Other | lineage3 | gb | ERR4819622 | Other | lineage4.1.2.1 | None | ERR4818958 | Other | lineage4.1.1.1 | gb | ERR4815040 | Other | lineage4.2.2.2 | None | ERR4816531 | Other | lineage4.1.2 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR2515818 | Other | lineage4.3.2.1 | za | ERR4820543 | Other | M.orygis | None | SRR6046189 | Other | lineage4.8 | None | ERR2513912 | Other | lineage4.5 | gb | SRR5818672 | Other | lineage1.2.2.2 | None | SRR3675286 | Other | lineage4.1.2.1 | gb | SRR6045325 | Other | lineage4.8.1 | gb | ERR3276170 | Other | lineage4.1.2.1 | nl | ERR2515062 | Other | lineage2.2.1.2 | gb | ERR2512494 | Other | lineage4.3.3 | gb | SRR6045024 | Other | lineage4.1.1.2 | None | ERR4818187 | Other | lineage4.6.1.1 | gb | ERR4816627 | Other | lineage2.2.2 | None | ERR4821924 | HR-TB | lineage4.6.2.2 | gb | SRR2101663 | Other | lineage1.1.3.2 | None | ERR4816928 | HR-TB | lineage1.2.2.2 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | ERR4816147 | RR-TB | lineage2.2.1 | gb | SRR5007161 | RR-TB | lineage4.1.1 | None | SRR6046064 | Other | lineage3 | gb | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4820242 | Other | lineage1.2.2.1 | None | ERR4818952 | Other | lineage3 | None | SRR6824324 | Other | lineage4.5 | None | SRR6046481 | Other | lineage4.1.1.3.1 | None | SRR6046403 | Sensitive | lineage4.3.1.1 | gb | SRR2101637 | RR-TB | lineage4.4.1.1 | None | SRR6045591 | Other | lineage4.1.2.1 | None | SRR6045465 | Other | lineage4.4 | gb | SRR3675474 | Other | lineage4.1.1.1 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | SRR6046096 | Sensitive | lineage4.1.2.1 | None | SRR2101087 | Other | lineage4.4.2 | None | ERR4820471 | Other | lineage3 | gb | ERR4818846 | Other | lineage4.1.2.1 | gb | ERR4820891 | Other | lineage4.9 | gb | SRR6045261 | Other | lineage1.1.2 | gb | SRR3675287 | Other | lineage3 | None | ERR137226 | MDR-TB | lineage2.2.1 | None | SRR6152949 | Other | lineage1.2.1.2.1 | ca | ERR4821940 | Other | lineage4.9 | None | SRR3675513 | Other | lineage4.8 | None | SRR3675491 | Other | lineage4.7 | None | SRR6045232 | Other | lineage4.1.1.3 | gb | ERR4815684 | Other | lineage5.1.4 | gb | SRR6044904 | Other | lineage3 | None | ERR4819640 | RR-TB | lineage4.6.2.2 | None | ERR4818280 | Other | lineage4.1.2.1 | gb | SRR6046764 | Other | lineage4.2.2 | None | SRR6045295 | Other | lineage4.7 | None | ERR2514858 | Other | lineage2.2.1.2 | gb | SRR2101636 | Other | lineage4.3.2.1 | None | ERR4817866 | HR-TB | lineage3 | gb | SRR6045396 | Sensitive | lineage4.3.1.1 | None | ERR2513384 | Other | lineage4.8.2 | gb | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4821543 | Other | lineage4.3.2.1 | gb | ERR4815738 | Other | lineage3 | None | ERR2513743 | Other | lineage4.1.2 | None | ERR4814748 | Other | lineage4.8 | None | ERR4816219 | Other | lineage4.1.1.2 | gb | SRR6152666 | Sensitive | lineage4.7 | ca | ERR2512832 | Other | lineage4.3.4.1 | None | SRR5067459 | HR-TB | lineage4.2.2 | None | ERR4821679 | Other | lineage4.3.3 | None | ERR4816968 | Other | lineage4.2.1 | gb | ERR4818785 | RR-TB | lineage4.1.2.1 | None | SRR6045376 | HR-TB | lineage4.1.2.1 | gb | SRR6045017 | Other | lineage3.1.2.2 | None | ERR4820748 | Other | lineage3 | None | SRR5818610 | Other | lineage3 | None | SRR2101625 | Other | lineage4.1.2;lineage3.1.1 | None | SRR6046219 | Other | lineage4.8;lineage3 | gb | ERR4821849 | Other | lineage4.5 | gb | SRR6044888 | Other | lineage4.1.1.3.1 | None | ERR2513398 | Other | lineage4.2.1 | gb | SRR6045424 | Other | lineage1.1.2 | None | ERR4821214 | RR-TB | lineage1.2.1.2.1 | None | ERR4817206 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | SRR3675261 | Other | lineage1.2.1.1 | None | ERR4814932 | Other | lineage4.1.1.1 | None | SRR6046223 | Sensitive | lineage3 | gb | SRR6045726 | Other | lineage3 | None | ERR2514533 | Other | lineage4.9 | None | ERR4821054 | Other | lineage3 | None | SRR6046634 | Other | lineage3 | gb | SRR3675497 | Other | lineage4.1.2.1 | None | SRR6046391 | Other | lineage4.1.1.3 | gb | SRR3675512 | Other | lineage2.2.1 | None | ERR2513903 | Other | lineage4.4.1.1 | gb | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR2513018 | Other | lineage3 | gb | ERR4820652 | Other | lineage1.1.1 | gb | ERR2513378 | Other | lineage3 | None | ERR4815994 | Other | lineage3 | gb | ERR4815039 | Other | lineage4.1.1.3.1 | gb | ERR2513819 | Pre-XDR-TB | lineage4.3.3 | gb | ERR4815299 | Other | lineage4.8 | gb | SRR6045138 | Other | lineage3.1.1 | None | SRR6046463 | Other | lineage4.4.1.1 | None | ERR4815956 | Other | lineage1.1.2 | None | ERR4814789 | Other | lineage3 | gb | ERR4822176 | Other | lineage4.1.1.2 | None | ERR2509886 | RR-TB | lineage3 | None | ERR2513886 | Other | lineage4.2.1.1 | gb | SRR6046398 | Other | lineage4.1.1.3.1 | gb | ERR2513059 | Other | lineage4.1.1.1 | gb | ERR2514457 | Other | lineage4.1.1.1 | gb | SRR6046159 | Other | lineage4.8.2 | None | SRR6824440 | Sensitive | lineage4.5;lineage4.4.2 | None | ERR4818801 | Sensitive | lineage4.7 | gb | SRR6046273 | Other | lineage3.1.2 | None | ERR4815502 | Other | lineage4.1 | None | SRR6045621 | Other | lineage4.1.1.3 | None | SRR6045768 | Other | lineage4.1.2.1 | gb | SRR2101666 | Sensitive | lineage4.8 | None | SRR6045749 | Other | lineage4.1.1.1 | gb | SRR8380862 | MDR-TB | lineage2.2.1.1 | in | ERR4815921 | Other | lineage4.3.3 | gb | ERR2513868 | Other | lineage3 | gb | SRR5341254 | Other | lineage4.2.2.2 | in | SRR5818665 | Other | lineage4.6.5 | dj | ERR4814821 | Other | lineage2.2.1 | None | ERR4816303 | Other | lineage4.1.1.3 | gb | SRR5818591 | Other | lineage4.2.2.2 | dj | SRR2101617 | Other | lineage4.1.1.1 | None | ERR2514838 | Other | lineage4.8 | gb | ERR4816736 | Other | lineage4.8 | gb | ERR2514073 | Other | lineage4.1.1.3.1 | None | ERR4819332 | Other | lineage3 | gb | SRR3675225 | Other | lineage2.2.1.2 | None | ERR2515641 | Other | lineage2.2.1 | za | SRR3675538 | Other | lineage4.8 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6045763 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046442 | Other | lineage3 | None | ERR4819424 | Other | lineage4.8 | gb | SRR6046739 | Other | lineage1.1.2 | None | ERR502530 | Other | lineage6.3.1 | gh | ERR4820690 | Other | lineage4.1.1 | gb | ERR4818763 | Other | lineage3 | gb | SRR6153150 | Other | lineage3.1.1 | None | SRR3675454 | Other | lineage3 | gb | ERR2514739 | Other | lineage4.8 | gb | DRR185003 | Other | lineage2.2.1 | vn | ERR4820049 | Other | lineage4.8 | gb | ERR2512544 | Other | lineage1.1.2 | gb | ERR2512433 | Other | lineage3 | gb | ERR2514565 | Other | lineage3.1.2.1 | gb | ERR2514479 | Other | lineage4.8.2 | gb | ERR2513850 | Pre-XDR-TB | lineage2.2.1 | gb | ERR2515069 | Other | lineage4.4.1.1 | gb | ERR2515823 | Sensitive | lineage4.3.2.1;lineage2.2.1 | None | ERR2984792 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR2515854 | Sensitive | lineage2.2.1 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR3324328 | MDR-TB | lineage2.2.1 | None | ERR3804142 | Sensitive | lineage6.3.1 | None | ERR3324355 | HR-TB | lineage4.1.1.3 | None | ERR4188330 | Other | La1.8.1 | None | ERR4814703 | Other | lineage4.1.1 | gb | ERR4814496 | RR-TB | lineage4.1.2 | None | ERR4816713 | Other | lineage1.1.2 | gb | ERR4816779 | Other | lineage3 | gb | ERR4817398 | Other | lineage3.1.1 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4817248 | Other | lineage4.6.2.2 | gb | ERR4817202 | MDR-TB | lineage3.1.2 | gb | ERR4818265 | Other | lineage4.1.2.1 | None | ERR4817435 | Other | lineage1.1.3.1 | None | ERR4817795 | Other | lineage4.7 | gb | ERR4817730 | Other | lineage4.2.1.1 | gb | ERR4819727 | Other | lineage1.1.3.1 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4819167 | Other | lineage3 | gb | ERR4819503 | Other | lineage3 | None | ERR4820622 | Other | lineage4.3.4.2 | None | ERR4820404 | Other | lineage4.3.2 | None | ERR4820187 | Other | lineage4.3.3 | None | ERR4822150 | Other | lineage4.8 | gb | ERR4821492 | HR-TB | lineage3 | None | ERR4821932 | Other | lineage2.2.1 | None | ERR4821907 | Other | lineage4.1.1.3 | gb | ERR4828843 | MDR-TB | lineage4.2.2.2 | None | SRR1019127 | Other | lineage4.9;lineage2.2 | None | ERR9117696 | Other | lineage4.1.2.1 | None | ERR5162133 | Other | La1.8.1 | None | ERR5987345 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025347 | Sensitive | lineage4.9 | None | ERR9993216 | MDR-TB | lineage4.1.1.3 | None | SRR11342683 | Other | lineage4.1.2 | None | SRR10869268 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR11349182 | MDR-TB | lineage2.2.1 | None | SRR11349207 | RR-TB | lineage2.2.1 | None | SRR11349184 | MDR-TB | lineage2.2.1 | None | SRR11349175 | Other | lineage2.2.1 | None | SRR16627757 | Sensitive | lineage3 | None | SRR16295751 | Other | lineage2.2.1 | None | SRR16295799 | Other | lineage2.2.1 | None | SRR1735629 | Other | lineage1.2.2.2 | gb | SRR1792378 | Other | La1.8.1 | None | SRR20970048 | Other | lineage4.2.2 | None | SRR18002902 | Other | lineage2.2.1 | None | SRR18213721 | Other | lineage4.8 | None | SRR21239878 | HR-TB | lineage4.4.1.1 | None | SRR2101816 | Other | lineage4.8 | None | SRR22424905 | RR-TB | lineage4.9 | None | SRR3675485 | Other | lineage2.2.1 | None | SRR5007163 | MDR-TB | lineage4;lineage3 | None | SRR3675567 | Other | lineage4.8 | gb | SRR6044936 | Other | lineage4 | None | SRR6045537 | Pre-XDR-TB | lineage2.2.1 | None | SRR6045288 | Other | lineage3 | gb | SRR6045664 | Other | lineage4.2.1 | None | SRR6046092 | HR-TB | lineage4.8 | gb | SRR6046607 | Other | lineage3 | None | SRR6045846 | Other | lineage4.4.1.1 | None | SRR6046281 | Other | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | SRR6046815 | Other | lineage3 | None | SRR6046701 | Other | lineage3.1.2.2 | None | SRR6046848 | Other | lineage4.6.5 | None | SRR6982448 | Sensitive | lineage4;lineage2.2.1 | None | SRR6982180 | Sensitive | lineage4.1.1.2 | None | SRR6045952 | HR-TB | None | SRR6982190 | Sensitive | lineage4.3.3 | None | SRR6982362 | Other | lineage4.3.2.1 | None | SRR7131257 | Other | lineage6.3.1 | None | SRR7131230 | HR-TB | lineage4.3.4.2 | None | SRR8600222 | Other | La1.8.1 | None | SRR8651662 | Pre-XDR-TB | lineage2.2.1 | None | ERR10796630 | HR-TB | None | SRR9971256 | MDR-TB | lineage2.2.1 | None | ERR10219876 | Other | lineage4.3.4.2 | None | ERR1665403 | MDR-TB | lineage2.2.1 | None | ERR2510804 | Other | lineage2.2.1 | None | ERR2027252 | Other | lineage4.8;lineage4.2.1.1 | None | ERR2513462 | Sensitive | lineage3.1.3 | gb | ERR2514393 | Other | lineage4.1.1.3.1 | gb | ERR2513450 | Other | lineage1.2.1.2.1 | gb | ERR3283051 | Other | lineage4.9 | None | ERR4192550 | Other | lineage6.1.1 | None | ERR3324329 | HR-TB | lineage4.1.1.3 | None | ERR4814841 | Other | lineage4.1 | None | ERR4800111 | Sensitive | lineage3.1.2.1 | None | ERR4814524 | Other | lineage4.1.1 | gb | ERR4816604 | RR-TB | lineage4.1.2 | None | ERR4816353 | Other | lineage2.2.1 | gb | ERR4815425 | Other | lineage4.5 | gb | ERR4820026 | Other | lineage3 | None | ERR4817306 | Other | lineage3 | gb | ERR4817464 | Other | lineage3.1.1 | None | ERR4819423 | Other | lineage4.6.2.2 | None | ERR4819636 | Other | lineage3.1.2 | None | ERR4820284 | Other | lineage4.9 | None | ERR4820297 | Other | lineage4.2.1 | None | ERR4821371 | Other | lineage4.8 | gb | ERR4822193 | Sensitive | lineage4.2.1 | None | ERR4821791 | HR-TB | lineage4.1.2.1 | None | ERR4821538 | Other | lineage3 | None | ERR6197032 | Other | lineage4.9 | None | ERR9117706 | Other | lineage4.4 | None | ERR6197024 | RR-TB | lineage4.9 | None | ERR9117806 | Other | lineage4.8 | None | ERR9117695 | Other | lineage4.1.2.1 | None | ERR9786543 | Sensitive | lineage4.1.2.1 | None | SRR11349191 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315476 | MDR-TB | lineage4.8 | None | SRR10726045 | MDR-TB | lineage4.3.3 | None | SRR11349173 | RR-TB | lineage2.2.1 | None | SRR12882669 | RR-TB | lineage3.1.1 | None | SRR11349196 | MDR-TB | lineage2.2.1 | None | SRR1175304 | MDR-TB | lineage4.3.3 | None | SRR15723110 | Sensitive | lineage2.2.1 | None | SRR16295763 | Other | lineage2.2.1 | None | SRR16295782 | Other | lineage2.2.1 | None | SRR16295745 | Other | lineage2.2.1 | None | SRR18002891 | MDR-TB | lineage2.2.1 | None | SRR16295822 | Other | lineage2.2.1 | None | SRR16295804 | Other | lineage2.2.1 | None | SRR16295829 | Other | lineage2.2.1 | None | SRR18003052 | Other | lineage2.2.1.1 | None | SRR20969923 | Other | lineage2.2.1 | None | SRR2101774 | Sensitive | lineage2.2.1 | None | SRR21240093 | Other | lineage4.1.2.1 | None | SRR2101627 | Other | lineage4.1.2.1 | None | SRR22424778 | RR-TB | lineage2.2.1.1 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR5007182 | MDR-TB | lineage3 | None | SRR5818694 | RR-TB | lineage4.2.2.2;lineage3 | None | SRR6045125 | Other | lineage1.1.2 | None | SRR6045833 | Other | lineage3.1 | gb | SRR6045205 | Sensitive | lineage4.9 | None | SRR6045384 | Other | lineage4.1.2 | None | SRR6045925 | Other | lineage4.2 | None | SRR6045743 | Other | lineage3 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR6046636 | Other | lineage4.3.1.1 | gb | SRR6046528 | Other | lineage3.1.2.1 | None | SRR6046818 | Other | lineage4.2.1 | gb | SRR6855721 | Sensitive | lineage4.3.2.1 | None | SRR6045399 | Other | None | SRR6046384 | Other | lineage4.3.1.1 | gb | SRR6045526 | HR-TB | None | SRR6982011 | Other | lineage4.1.1 | None | SRR6981941 | Sensitive | lineage4.3.4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR8651616 | MDR-TB | lineage2.2.1 | None | ERR2509885 | RR-TB | lineage3 | None | SRR7131068 | Other | lineage4.8 | None | SRR7131234 | Other | lineage4.9 | None | ERR2513056 | HR-TB | lineage4.1.2.1 | gb | ERR2514630 | Other | lineage3.1.2.1 | gb | ERR2514896 | Other | lineage3 | gb | ERR2514609 | HR-TB | lineage3 | gb | ERR4814438 | HR-TB | lineage4.1.2.1 | gb | ERR4187921 | Other | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR4814801 | Other | lineage4.8 | gb | ERR4815143 | HR-TB | lineage4.2.2.2 | None | ERR4814986 | Other | lineage4.3.4.2 | None | ERR4815780 | MDR-TB | lineage4.1.3 | None | ERR4815193 | MDR-TB | lineage4.8 | None | ERR4816571 | Other | lineage1.1.2 | None | ERR4816232 | Other | lineage4 | None | ERR4815901 | Other | lineage2.2 | None | ERR4816718 | Other | lineage4.1.2.1 | gb | ERR4817354 | Other | lineage3 | gb | ERR4816690 | Other | None | ERR4818126 | RR-TB | lineage1 | None | ERR4817555 | RR-TB | lineage3 | None | ERR4818797 | Other | lineage4.5 | None | ERR4818287 | Other | lineage4.5 | gb | ERR4818507 | RR-TB | lineage4.1.2.1 | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None | ERR4819555 | Other | lineage4.8 | None | ERR4819334 | Other | lineage4.2.2.2 | gb | ERR4818977 | RR-TB | lineage4.1.2.1 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819958 | Other | lineage3 | gb | ERR4821409 | Other | lineage4.8 | None | ERR4819989 | Sensitive | lineage4.1.2.1 | gb | ERR4820059 | Other | lineage3 | None | ERR4821417 | Other | lineage1.1.3.1 | None | ERR4828962 | Other | lineage4.1.4 | it | ERR4821761 | Other | lineage3 | gb | ERR5336160 | Other | lineage6.3.2 | None | ERR7821182 | Other | lineage1.1.3.2 | None | ERR9117678 | Other | lineage4.6.2.2 | None | ERR9117763 | HR-TB | lineage3 | None | SRR10315705 | MDR-TB | lineage4.4.1.1.1 | None | SRR10315728 | MDR-TB | lineage4.8;lineage4.4.1.1.1 | None | SRR10315640 | MDR-TB | lineage4.8 | None | SRR10993956 | Other | La1.6 | None | SRR1181319 | Other | lineage2.2.1 | None | SRR11349205 | MDR-TB | lineage2.2.1 | None | SRR11349152 | XDR-TB | lineage4.3.3 | None | SRR16295743 | Other | lineage2.2.1 | None | SRR15522850 | HR-TB | lineage1.1.2 | None | SRR16295797 | Other | lineage2.2.1 | None | SRR16295785 | Other | lineage2.2.1 | None | SRR16295749 | Other | lineage2.2.1 | None | SRR18002935 | Pre-XDR-TB | lineage2.2.1 | None | SRR16295819 | Other | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR2101802 | Sensitive | lineage4.4.1.1 | None | SRR18002987 | Other | lineage2.2.1 | None | SRR18149430 | Sensitive | lineage4.1.1.3 | None | SRR2101647 | Sensitive | lineage4.9 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | SRR21686114 | Other | lineage3.1.3 | None | SRR6044993 | Other | lineage3 | None | SRR5818662 | Sensitive | lineage4.2.2.2 | dj | SRR6044817 | Other | lineage3 | None | SRR6045159 | Other | lineage3.1.1 | None | SRR6045705 | Other | lineage4.9 | None | SRR6045496 | Other | lineage6.1.3 | None | SRR6367397 | Other | lineage4.1.2.1 | None | SRR6045986 | Other | lineage3 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6045613 | Other | lineage3.1.3 | None | SRR6046275 | Other | lineage3.1.1 | None | SRR9970996 | XDR-TB | lineage4.4.1.1 | None | SRR6982410 | Other | lineage4.8.1 | None | SRR6982076 | Sensitive | lineage4.9 | None | ERR2512716 | HR-TB | lineage4.6.2.2 | gb | ERR144568 | Pre-XDR-TB | None | ERR2512599 | Other | lineage3 | gb | SRR9971153 | Pre-XDR-TB | lineage4.3.3 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR2512991 | Other | lineage1.2.1.2.1 | gb | ERR2512693 | Other | lineage1.1.2 | gb | ERR2513681 | Other | lineage1.1.2 | None | ERR2513005 | Other | lineage4.6 | gb | ERR2513389 | Other | lineage3.1.3 | gb | ERR2513699 | Other | lineage4.1.2 | gb | ERR2513738 | Other | lineage1.1.3.1 | None | ERR4815101 | Other | lineage3 | gb | ERR2514261 | Other | lineage3 | None | ERR3470663 | Sensitive | lineage3 | None | ERR4188255 | Other | lineage4.9;La1.8 | None | ERR4814790 | Other | lineage4.2.1 | None | ERR4814512 | Other | lineage2.2.1 | None | ERR4815478 | RR-TB | lineage2.2.1;lineage1.1.1 | gb | ERR4815314 | Other | lineage2.2.1.2 | gb | ERR4818663 | Other | lineage3 | None | ERR4815577 | Other | lineage3.1.3 | None | ERR4815919 | Other | lineage4.8 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | ERR4818691 | Other | lineage4.8 | None | ERR4815903 | Other | lineage4.1.2.1 | None | ERR4817266 | Other | lineage3 | None | ERR4817488 | Other | lineage4.3.4.2.1 | None | ERR4819078 | Other | lineage4.3.3 | None | ERR4818694 | RR-TB | lineage2.2.1 | gb | ERR4819131 | Other | lineage4 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4820558 | Other | lineage4.8 | gb | ERR4819630 | Other | lineage4.8 | gb | ERR4820717 | Other | lineage1.1.3 | None | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4821773 | Other | La1.6 | None | ERR4821011 | Other | lineage6 | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR4822154 | Other | lineage4.1.2.1 | None | ERR4821887 | Other | lineage4.1.2.1 | None | ERR4829285 | Other | lineage2.2.1 | None | ERR9117728 | Other | lineage3 | None | ERR4872152 | RR-TB | lineage4.6.2.2 | None | ERR9993034 | MDR-TB | lineage4.1.2.1 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117740 | Other | lineage3.1.1 | None | SRR12199472 | Sensitive | lineage1.1 | None | SRR11349193 | RR-TB | lineage4.1.2 | None | SRR15368914 | MDR-TB | lineage2.2.1 | None | SRR16295771 | Other | lineage2.2.1 | None | SRR16295777 | Other | lineage2.2.1 | None | SRR16295816 | Other | lineage2.2.1 | None | SRR15368722 | Pre-XDR-TB | lineage2.2.1 | None | SRR16295737 | Other | lineage2.2.1 | None | SRR16295817 | Other | lineage2.2.1 | None | SRR18002932 | Pre-XDR-TB | lineage2.2.1 | None | SRR16295801 | Other | lineage2.2.1 | None | SRR18003007 | MDR-TB | lineage4.5 | None | SRR18003049 | Other | lineage2.2.1 | None | SRR18213736 | MDR-TB | lineage3 | None |
|---|
