EBG00000313339 - n.696A>G


Drug resistance types
53 Sensitive 26 RR-TB 27 HR-TB 25 MDR-TB 14 Pre-XDR-TB 0 XDR-TB 93 Other
lineage Counts
lineage Count
lineage4.9 95
lineage2;lineage4.9 1
lineage4.3.4.2.1 7
La3;M.canetti;lineage4.9 1
lineage2.2 3
lineage4.3.1;lineage4.9;lineage6 1
lineage6.1.3 2
La1.2 2
lineage2.2.1;lineage4 1
lineage4.3.3 9
lineage4.4.1.1 2
lineage1.1.1 1
lineage4.8 5
lineage4.8.1 4
lineage3 8
lineage3;lineage4 2
lineage4.1.3 1
lineage2.2.1;lineage4.5 1
lineage2.2.1 19
lineage4.4.2 2
lineage1.2.1.2 1
lineage4.6.1.1 1
lineage4.9;lineage7 3
lineage4.1.1.3 3
lineage4.6.2.2 1
lineage4.1.2.1;lineage4.9 1
La1.4 1
lineage4.1.2.1 11
La1.3 4
lineage4.1.2.1;lineage4.4.1.1 1
lineage2.2.1;lineage4.9 3
lineage2.2.1.2;lineage7 1
lineage4.2.1 2
lineage3.1.2.1 1
La1.8.1 2
lineage2.1;lineage4.9 1
lineage4.2.2.2 1
lineage4.1.1.1 2
lineage2.2;lineage4.9 1
lineage4.8.2 1
lineage4.3.4.1;lineage4.9 1
lineage1.1.3.1 1
lineage2.2.2 2
lineage4.4.1.1.1 4
lineage1.1.1.1 1
lineage4.2.2 1
La1;lineage4.9 1
lineage4.1.2.1;lineage4.4.1 1
lineage4.9;lineage6.1.3 1
lineage4.5 1
lineage4.1.1.3.1 2
lineage4.3.1.1 1
lineage2.2.1.1 1
lineage4.3.2 1
lineage4.1.4 1
lineage4.3.4.1 1
lineage4.6.1.2 2
lineage4 1
lineage4.8.2;lineage4.9 1
lineage4.1.1.3.1;lineage4.9 1
lineage4.2.2.1 1
lineage4.2.1.1;lineage4.3.3 1
lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 238
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR502474 RR-TB lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
SRR1140753 RR-TB lineage4.3.4.2.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
SRR6046117 Other lineage4.9 None
ERR3806588 Other lineage6.1.3 None
ERR4769427 Other La1.2 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR867575 Other lineage4.9 None
ERR4819579 HR-TB lineage4.3.3 None
ERR5917972 MDR-TB lineage4.4.1.1 za
SRR21658550 Other lineage1.1.1 None
ERR4799025 Other lineage4.8 None
SRR6046492 Other lineage4.9 None
SRR9971150 RR-TB lineage4.8.1 None
ERR6359066 HR-TB lineage4.9 None
SRR16156775 Other lineage4.9 None
ERR867567 RR-TB lineage3 None
SRR3675230 Other lineage3;lineage4 None
ERR4769433 RR-TB lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR4816198 Sensitive lineage4.1.3 None
ERR502473 RR-TB lineage4.9 None
ERR4811035 Pre-XDR-TB lineage2.2.1;lineage4.5 None
SRR11342653 MDR-TB lineage2.2.1 None
SRR12708392 Other lineage2.2.1 None
SRR11342636 MDR-TB lineage4.3.3 None
SRR20969542 Other lineage4.4.2 None
ERR3283021 HR-TB lineage4.9 None
DRR188519 Other lineage4.4.2 None
SRR20969475 Other lineage1.2.1.2 None
SRR7535047 RR-TB lineage4.6.1.1 None
SAMN02380982 MDR-TB lineage4.3.4.2.1 None
SRR14782405 HR-TB lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1180399 Sensitive lineage4.9 None
SRR11342647 MDR-TB lineage4.1.1.3 None
SRR11342676 HR-TB lineage4.6.2.2 None
SRR1062928 Other lineage4.1.2.1;lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR16278274 Other La1.4 None
SRR1181351 Sensitive lineage4.9 None
ERR10796598 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR2851356 Sensitive lineage4.9 None
SRR11342655 MDR-TB lineage2.2.1 None
ERR473334 HR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
ERR4769555 Sensitive La1.3 None
ERR4819166 Other lineage3 gb
SRR20970016 Other lineage2.2 None
SRR1181402 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
ERR4769418 Other La1.2 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR1180312 Sensitive lineage4.9 None
SRR1049726 Other lineage4.1.2.1;lineage4.4.1.1 None
SRR1140736 Other lineage4.1.2.1 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR3275190 Other lineage3 nl
SRR1049674 HR-TB lineage2.2.1 None
SRR1173170 Other lineage4.9 None
SRR11342662 MDR-TB lineage4.8.1 None
SRR1180250 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR18912069 Other lineage4.1.2.1 None
SRR6044875 Sensitive lineage4.9 None
ERR4819357 Sensitive lineage4.9 None
SRR7069347 Other lineage4.1.2.1 None
SRR11342649 MDR-TB lineage4.3.3 None
ERR867524 Pre-XDR-TB lineage4.2.1 None
SRR1180300 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
ERR4822138 Other lineage4.1.2.1 None
ERR4815022 Other lineage3.1.2.1 None
SRR5153091 HR-TB lineage4.3.3 None
SRR7617847 Other La1.8.1 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
SRR20969731 Other lineage2.2.1 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR6045267 RR-TB lineage4.8 None
SRR5007169 RR-TB lineage4.8.2 None
ERR867574 Other lineage4.9 None
ERR2446509 Other lineage3 nl
SRR5818647 Other lineage4.3.4.2.1 None
ERR2446566 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR11342660 MDR-TB lineage2.2.1 None
ERR4821704 Other lineage4.3.3 None
ERR4769457 Other lineage4.9 None
ERR10796572 Other lineage4.3.4.1;lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR502478 RR-TB lineage4.9 None
SRR1184308 Sensitive lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR867572 Other lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR867523 Pre-XDR-TB lineage2.2.1 None
ERR4820030 Other lineage4.9 None
ERR867541 MDR-TB lineage4.2.1 None
SRR1183054 Sensitive lineage4.9 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
ERR4769552 Sensitive La1.3 None
ERR6358951 Sensitive lineage4.9 None
ERR4769493 Other lineage4.9 None
ERR4821616 Other lineage1.1.3.1 None
DRR185024 Other lineage2.2.2 None
SRR11342696 MDR-TB lineage4.4.1.1.1 None
ERR3797047 MDR-TB lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR11342644 MDR-TB lineage4.4.1.1.1 None
SRR1173740 Other lineage3;lineage4 None
ERR3797046 HR-TB lineage4.9 None
ERR752012 HR-TB lineage1.1.1.1 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
ERR4769419 Sensitive lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
DRR188816 Sensitive lineage4.2.2 None
SRR18002908 Other lineage2.2.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR6359082 Other lineage4.9 None
ERR4769514 Other La1.3 None
SRR11342664 MDR-TB lineage2.2.2 None
SRR1735598 RR-TB lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1173770 Other lineage4.9 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4819462 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR1180355 Sensitive lineage4.9 None
ERR4769550 Sensitive La1;lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
SRR1049725 Other lineage4.1.2.1;lineage4.4.1 None
SRR1175513 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR21240055 Other lineage4.1.2.1 None
ERR4816322 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR2513082 Other lineage4.1.2.1 gb
ERR4769444 HR-TB lineage4.9 None
ERR752229 Other lineage4.5 None
SRR1049675 HR-TB lineage2.2.1 None
ERR4769439 HR-TB lineage4.9 None
ERR867527 Pre-XDR-TB lineage2.2.1 None
SRR11342668 Pre-XDR-TB lineage4.8.1 None
ERR387051 Other lineage4.9 None
ERR4816610 Other lineage4.3.3 None
SRR18002941 RR-TB lineage2.2.1 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
ERR502481 RR-TB lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR18002933 Other lineage2.2.1 None
ERR10796564 Other lineage4.3.3 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
SRR6045071 Other lineage4.3.1.1 None
SRR6045957 Other lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR4769408 Other La1.3 None
ERR176741 Other lineage4.9 None
ERR4818272 Other lineage4.3.2 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR1184021 Sensitive lineage4.9 None
ERR4769508 RR-TB lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
ERR9786276 Sensitive lineage4.8 None
SRR14782054 Other lineage4.9 None
ERR4828962 Sensitive lineage4.1.4 it
SRR11342651 MDR-TB lineage4.1.1.1 None
SRR5341330 Other lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
ERR867554 Other lineage4.3.4.1 None
SRR3675245 Other lineage4.1.2.1 None
ERR4816852 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR6359069 Sensitive lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR18002967 HR-TB lineage2.2.1 None
DRR184629 Other lineage2.2.1 None
SRR1180319 Sensitive lineage4.9 None
SRR5341267 Pre-XDR-TB lineage3 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
SRR1180977 Sensitive lineage4.9 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1181349 Sensitive lineage4 None
SRR6046250 Other lineage4.9 None
SRR5007168 Other lineage4.8.2;lineage4.9 None
ERR4818831 Other lineage3 None
SRR7236330 Other La1.8.1 None
ERR2886463 Sensitive lineage2.2.1 None
SRR1175512 Sensitive lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR1062871 RR-TB lineage4.3.4.2.1 None
ERR867525 Pre-XDR-TB lineage2.2.1 None
ERR867573 Other lineage4.9 None
SRR1062918 Other lineage3 None
ERR4819863 RR-TB lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SRR1049582 MDR-TB lineage4.6.1.2 None
ERR4818536 Other lineage4.9 None
ERR4819175 Other lineage4.1.1.3 gb
ERR10796597 Other lineage4.3.3 None
SRR11342693 MDR-TB lineage4.8.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR4769530 RR-TB lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR6045832 Other lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR1180406 Sensitive lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1;lineage4.9 None
SRR28351557 Other lineage4.2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR11342658 RR-TB lineage4.1.2 None
SRR1180345 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
ERR9787336 RR-TB lineage6.1.3 None
SRR19303820 RR-TB lineage4.8 None