EBG00000313339 - n.696A>G


Drug resistance types
56 Sensitive 51 RR-TB 51 HR-TB 21 MDR-TB 30 Pre-XDR-TB 0 XDR-TB 185 Other
lineage Counts
lineage Count
lineage1.1.1.1 1
lineage4.5 2
lineage4.2.2.2 3
lineage4.3 1
lineage1.2.2.2 1
lineage4.6.1.2 5
lineage3 28
lineage4.8 14
lineage6 3
lineage4.3.4.2.1 8
lineage4.1.2.1 30
lineage4.3.4.2 2
lineage2.2.1 38
lineage4.4.1.1;lineage4.1.2.1 1
24
lineage4 17
lineage4.4.1.1.1 2
lineage4.3.3 12
lineage4.9 106
lineage2.2.1.2 1
lineage4.9;lineage2.2 1
lineage2.2 4
lineage2 1
lineage4.2.2.1 2
La1.4 1
La1.8.1 1
lineage7;lineage2.2.1.2 1
lineage2.2.1.1 1
lineage1.2.1.2 1
lineage4.4.2 2
lineage4.1.1 2
lineage1.1.1 3
lineage4.1.3 2
lineage4.1.2 2
lineage4.6.5 1
lineage4.1 5
lineage1.1.3.1 3
lineage1.2.1.1 1
lineage3.1.2.1 1
lineage5 1
lineage1.1.2 4
lineage4.7 2
lineage4.6.2.2 3
lineage4.4.1.1 6
lineage4.3.2 2
lineage4.1.1.3.1 4
lineage3.1.3 1
lineage1 1
lineage4.1.1.3 3
lineage4.8.2 1
lineage4.2.2 2
lineage1.2.1.2.1 1
lineage3.1.1 2
lineage6.1.3 1
lineage3.1.2.2 1
lineage4.3.1.1 3
lineage3.1.2 1
lineage4.1.4 1
lineage4.3.4.1 2
lineage4.6.1.1 1
lineage4.8.1 1
La1.2 3
lineage2.2.2 1
lineage4.3.4 1
lineage4;La1.3 1
La1.3 7
lineage4.9;La1.3 2
lineage4.5;lineage2.2.1 1
spoligotype Counts
spoligotype Count
None 394
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR752012 HR-TB lineage1.1.1.1 None
ERR752229 Other lineage4.5 None
ERR9117676 Other lineage4.2.2.2 None
ERR9117760 HR-TB lineage4.3 None
ERR9117827 Other lineage1.2.2.2 None
SRR1049581 MDR-TB lineage4.6.1.2 None
ERR9786076 Sensitive lineage3 None
ERR9786276 Sensitive lineage4.8 None
ERR9787336 Other lineage6 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
ERR9786705 Sensitive lineage4.1.2.1 None
SRR10397107 RR-TB lineage4.3.4.2 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049675 HR-TB lineage2.2.1 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1049672 Other lineage3 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1049674 HR-TB lineage2.2.1 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR1140736 RR-TB None
SRR1062919 HR-TB lineage2.2.1 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1062928 RR-TB lineage4 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR11349211 Pre-XDR-TB lineage4.3.3 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR1140724 HR-TB lineage2.2.1 None
SRR1173170 Other lineage4.9 None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1172717 Other lineage4.9 None
SRR1172796 Sensitive lineage2.2.1.2 None
SRR1172807 Sensitive lineage4.9 None
SRR1172987 HR-TB lineage4.9 None
SRR1173515 HR-TB lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR1173687 Pre-XDR-TB lineage2.2.1 None
SRR1180148 Sensitive lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1173740 Other None
SRR1175506 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180444 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181325 Sensitive lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181351 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181402 Sensitive lineage4.9 None
SRR13180205 Sensitive lineage4.1.2.1 None
SRR1184308 Sensitive lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR13180203 Sensitive lineage4.2.2.1 None
SRR1184021 Sensitive lineage4.9 None
SRR1196545 HR-TB lineage4.9 None
SRR14334194 Pre-XDR-TB lineage2.2.1 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR16278274 Other La1.4 None
SRR14782405 HR-TB None
SRR16149170 MDR-TB lineage4.2.2.1 None
SRR16156775 Other lineage4.9 None
SRR17156536 Other La1.8.1 None
SRR1735596 RR-TB lineage4.9 None
SRR18002881 Pre-XDR-TB lineage2.2.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR18002941 RR-TB lineage2.2.1 None
SRR18002967 Pre-XDR-TB lineage2.2.1 None
SRR18003023 Other lineage2.2.1 None
SRR18003027 Other lineage2.2.1 None
SRR18003031 HR-TB lineage2.2.1 None
SRR18002903 Pre-XDR-TB lineage2.2.1 None
SRR18002908 Other lineage2.2.1 None
SRR18002933 Other lineage2.2.1 None
SRR18002999 Pre-XDR-TB lineage2.2.1 None
SRR18909918 Other lineage2.2.1.1 None
SRR19304094 Other lineage6 None
SRR19303796 Other lineage4.3.3 None
SRR19303820 RR-TB lineage4.8 None
SRR18912069 Other lineage4.1.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR19304115 Other lineage4.1.2.1 None
SRR20969475 Other lineage1.2.1.2 None
SRR20969542 Other lineage4.4.2 None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR3675474 Other lineage4.1.1 None
SRR21658550 Other lineage1.1.1 None
SRR21240055 Other lineage4.1.2.1 None
SRR21677886 Sensitive lineage4.9 None
ERR4815143 HR-TB lineage4.2.2.2 None
ERR4815780 MDR-TB lineage4.1.3 None
ERR4815310 Other None
ERR4814362 Other lineage4.8 None
SRR3675245 Other lineage4.1.2.1 None
ERR4814496 RR-TB lineage4.1.2 None
ERR4815471 Other lineage4.9 None
ERR4819579 HR-TB lineage4.3.3 None
ERR4814745 Other lineage4.6.5 None
ERR4814763 Other lineage2.2.1 None
ERR4815502 Other lineage4.1 None
ERR4814617 Other lineage1.1.3.1 None
ERR4814623 Other lineage4.8 None
ERR4814681 Other lineage2.2.1 None
ERR1665404 Pre-XDR-TB lineage2.2.1 None
ERR4815467 Other lineage3 None
SRR3675230 RR-TB lineage3 None
SRR3675261 Other lineage1.2.1.1 None
ERR4814821 Other lineage2.2.1 None
ERR4814911 Other lineage4.3.3 None
ERR4814841 Other lineage4.1 None
ERR4815550 Other lineage4 None
ERR4814952 Sensitive lineage3 None
ERR4816982 Other lineage4 None
ERR4814976 Other lineage4.9 None
ERR4815022 Other lineage3.1.2.1 None
ERR4816967 RR-TB lineage5 None
ERR2027257 Other lineage4.1.2.1 None
ERR4816231 Other lineage4 None
ERR4816198 Sensitive lineage4.1.3 None
ERR4816300 Other lineage4.1.2.1 None
ERR4816243 Sensitive lineage3 None
ERR4816270 Other lineage4.1.2.1 None
ERR4817060 RR-TB None
SRR3675555 HR-TB None
ERR4816322 Other lineage4.9 None
SRR3675565 Other lineage3 None
ERR4816571 Other lineage1.1.2 None
ERR4816417 Other lineage4.9 None
ERR4817131 Pre-XDR-TB None
ERR216965 HR-TB lineage4.9 None
ERR4816692 Other lineage4.1.2.1 None
ERR4816604 RR-TB lineage4.1.2 None
ERR4816610 RR-TB lineage4.3.3 None
ERR4817175 Other lineage4.8 None
ERR4817189 Other lineage4.7 None
ERR2229369 Other lineage4.8 None
ERR4817276 Other lineage2.2.1 None
ERR4816729 Sensitive lineage4.9 None
ERR4816745 Pre-XDR-TB lineage2.2.1 None
ERR4816702 RR-TB lineage4.6.2.2 None
ERR4816856 Other lineage4.1.2.1 None
ERR4816852 Other lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4816868 Other lineage4.4.1.1 None
ERR4816866 Other lineage2.2.1 None
ERR4817735 Other lineage4.8 None
ERR4816907 Other lineage1.1.1 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR4818710 Sensitive lineage4.9 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4818952 Other lineage3 None
ERR228175 Sensitive lineage3 None
ERR4818050 Other lineage4.6.2.2 None
ERR4818785 RR-TB lineage4.1.2.1 None
ERR2446566 Other lineage4.1 None
ERR3275190 Other lineage3 nl
ERR4819073 Other lineage4.1.2.1 None
ERR4818261 Other lineage1.1.2 None
ERR2513223 Other lineage4.1.2.1 None
ERR4818393 RR-TB lineage3 None
ERR4818407 Other lineage4.3.2 None
ERR4818536 Other lineage4.9 None
SRR5007161 RR-TB lineage4.1.1.3.1 None
ERR2513589 Other lineage3.1.3 None
ERR4818726 Other lineage4.1.2.1 None
ERR2513401 HR-TB lineage3 None
ERR4818107 Sensitive lineage3 None
ERR4818126 RR-TB lineage1 None
ERR4818831 Other lineage3 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4818272 Other lineage4.3.2 None
ERR4818904 Other lineage4.8 None
ERR4818426 Sensitive lineage4.1.1.3 None
ERR4818507 RR-TB lineage4.1.2.1 None
ERR4818570 Other lineage4.3.3 None
ERR4818624 Other lineage4.3.4.2.1 None
SRR5007168 RR-TB lineage4.9 None
SRR5007167 RR-TB lineage4.1.1.3.1 None
ERR4817554 Other lineage1.1.1 None
SRR5007169 RR-TB lineage4.8.2 None
SRR5007193 RR-TB lineage4.1.1.3.1 None
ERR2512941 Other lineage1.1.2 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4820720 Other lineage4.1.2.1 None
ERR2513830 RR-TB lineage4.8 None
ERR4820265 Other lineage4.1.2.1 None
ERR4820266 RR-TB lineage3 None
ERR4820723 RR-TB lineage4.4.1.1 None
ERR2513924 RR-TB lineage4.8 None
ERR4820284 Other lineage4.9 None
ERR4819383 RR-TB lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR2514073 Other lineage4.1.1.3.1 None
ERR4819357 Other lineage4.9 None
ERR4820318 Other lineage4.2.2 None
ERR4820324 Other lineage4 None
ERR4820408 Other lineage4.1.2.1 None
ERR2514181 Other lineage1.2.1.2.1 None
ERR4820369 Other lineage2.2.1 None
ERR4819462 Other lineage4 None
ERR4820746 RR-TB lineage3 None
ERR4819641 HR-TB lineage4.6.2.2 None
ERR4819593 Other lineage4.5 None
ERR4820410 Pre-XDR-TB lineage3.1.1 None
SRR5341456 Other None
ERR2514533 Other lineage4.9 None
ERR2514692 Other None
ERR4820484 Other lineage4.8 None
ERR4820503 Other lineage2.2.1 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR4819830 Other lineage2.2.1 None
ERR4819863 RR-TB lineage4.9 None
ERR4819980 Other lineage4.1.2.1 None
ERR4819933 Other lineage4.9 None
ERR4819876 HR-TB lineage4.3.4.2.1 None
ERR4820030 Other lineage4.9 None
ERR4820026 Other lineage3 None
ERR6359082 Other lineage4.9 None
ERR4820193 Other lineage3 None
ERR4820151 RR-TB lineage4.8 None
SRR5341330 HR-TB None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR4821769 Other lineage4.1.2.1 None
ERR2446509 Other lineage3 nl
ERR2693238 HR-TB lineage4.9 None
SRR6045496 Other lineage6.1.3 None
ERR4821811 RR-TB lineage4.9 None
SRR6045464 Other lineage4.1.1.3 None
SRR6046089 Other lineage4.1.2.1 None
ERR4821119 Other lineage4.4.1.1 None
SRR6045516 Other lineage3.1.1 None
SRR6045537 Pre-XDR-TB lineage2.2.1 None
ERR4821286 Other lineage4.8 None
SRR6046117 RR-TB lineage4.9 None
ERR2660539 Other lineage4.9 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4821906 Other lineage4.1.1 None
ERR4822105 Other lineage4.1 None
ERR4821288 Other lineage4.7 None
SRR6045620 Other lineage3 None
ERR4822138 Other lineage4.1.2.1 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821704 MDR-TB lineage4.3.3 None
ERR4821616 Other lineage1.1.3.1 None
SRR6045642 Other lineage3.1.2.2 None
SRR6045805 Other lineage4.3.1.1 None
SRR6045683 Other lineage3.1.2 None
SRR6046141 Other lineage4.9 None
SRR5818647 RR-TB lineage4.3.4.2.1 None
SRR6045859 Other lineage3 None
SRR6045832 HR-TB lineage4.9 None
SRR6044875 HR-TB lineage4.9 None
SRR6045071 Other lineage4.3.1.1 None
SRR6045957 Other lineage4.9 None
SRR6045053 Other None
SRR6045217 Other lineage4 None
SRR6045124 Other lineage4.9 None
SRR6046046 Other None
SRR6045267 RR-TB lineage4 None
SRR6046250 Other lineage4.9 None
SRR6046281 Other lineage4.9 None
SRR6046291 Other lineage3 None
SRR6046343 Other lineage2.2.1 None
SRR6046299 HR-TB None
SRR6046385 Other lineage4.9 None
ERR2851356 Sensitive lineage4.9 None
SRR6046852 MDR-TB lineage3 None
SRR6046534 Other lineage1.1.2 None
SRR6046616 Other lineage4.3.1.1 None
ERR4830856 MDR-TB lineage4.4.1.1 None
SRR6046492 Other None
SRR6046737 Other lineage4.9 None
ERR323037 HR-TB lineage4 None
ERR3077953 Other lineage4.2.2.2 None
ERR4828962 Sensitive lineage4.1.4 it
ERR2886463 Sensitive lineage2.2.1 None
ERR485006 HR-TB lineage4.9 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR4831117 HR-TB None
ERR502478 RR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
SRR6832644 Other lineage4.3.3 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR502479 RR-TB lineage4.9 None
SRR6789624 MDR-TB lineage4.1 None
ERR2984800 Pre-XDR-TB lineage4.3.4.1 None
SRR6982471 Sensitive lineage2.2.1 None
SRR9971080 RR-TB lineage2.2.1 None
SRR7131296 Other lineage4.3.3 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR9971150 RR-TB lineage4.8.1 None
SRR8651616 MDR-TB lineage2.2.1 None
ERR323048 Pre-XDR-TB lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR7765062 Pre-XDR-TB lineage4.1.2.1 None
DRR184629 Other lineage2.2.1 None
SRR7851312 Other La1.2 None
DRR188816 Sensitive lineage4.2.2 None
DRR188519 Other lineage4.4.2 None
DRR185024 Other lineage2.2.2 None
ERR10796563 Other lineage4.3.3 None
ERR037234 Sensitive lineage4.9 None
ERR4819166 Other lineage3 gb
ERR4819175 Other lineage4.1.1.3 gb
ERR1063855 Other lineage4 None
ERR10796565 RR-TB lineage4.9 None
ERR10796564 Other lineage4.3.3 None
ERR10796597 Other lineage4 None
ERR10796571 Other lineage4.9 None
ERR10796576 RR-TB lineage4.9 None
ERR10796572 Other lineage4.3.4.1 None
ERR10796596 Other lineage4.9 None
ERR10796598 RR-TB lineage4.9 None
ERR2513082 Other lineage4.1.2.1 gb
ERR10796633 RR-TB lineage4.3.4 None
ERR108471 HR-TB lineage4 None
ERR3806588 Other lineage6 None
ERR3283013 MDR-TB lineage4 None
ERR3283021 HR-TB None
ERR3445504 HR-TB None
ERR3797046 HR-TB None
ERR3283048 HR-TB lineage4.9 None
ERR3283055 HR-TB None
ERR3797047 HR-TB lineage4 None
ERR4769406 Other lineage4.9 None
ERR473367 Sensitive lineage4.9 None
ERR387051 HR-TB None
ERR473323 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4769410 Other lineage4;La1.3 None
ERR4769408 Other La1.3 None
ERR4769419 Other lineage4.9 None
ERR4769427 Other La1.2 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR4769442 HR-TB lineage4 None
ERR4769436 Other La1.3 None
ERR4769452 HR-TB None
ERR4769444 HR-TB lineage4.9 None
ERR4769472 Other lineage4.9 None
ERR4769450 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769506 Sensitive La1.3 None
ERR4769493 Pre-XDR-TB lineage4.9;La1.3 None
ERR4769516 Other La1.3 None
ERR4769508 RR-TB lineage4.9 None
ERR4769518 Sensitive lineage4.9 None
ERR4769514 Other La1.3 None
ERR4769530 RR-TB lineage4.9 None
ERR4769552 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769555 Other La1.3 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4811493 HR-TB None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR4799025 Pre-XDR-TB None
ERR4799513 HR-TB lineage2.2 None
ERR4811035 Pre-XDR-TB lineage4.5;lineage2.2.1 None
ERR6197028 Other lineage4.9 None
ERR6197030 Other lineage4.9 None
ERR6359066 HR-TB lineage4 None
ERR6358951 HR-TB lineage4 None
ERR6197044 RR-TB lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6359069 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR6359070 Other lineage4.9 None
ERR736837 Other lineage4.9 None
ERR736831 HR-TB lineage4.9 None