EBG00000313339 - n.696A>G
Drug resistance types
53 Sensitive
26 RR-TB
27 HR-TB
25 MDR-TB
14 Pre-XDR-TB
0 XDR-TB
93 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.1 | 2 |
| lineage3 | 8 |
| lineage4.9 | 95 |
| La1.3 | 4 |
| lineage4.6.1.1 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage2.2.2 | 2 |
| lineage2.2.1 | 19 |
| lineage4.2.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| La1.4 | 1 |
| lineage2.2 | 3 |
| lineage4.1.1.3 | 3 |
| lineage4.4.1.1 | 2 |
| lineage4.8.1 | 4 |
| lineage4.4.1.1.1 | 4 |
| lineage4.1.2.1 | 11 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.3 | 9 |
| lineage2;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 7 |
| lineage3.1.2.1 | 1 |
| La1.8.1 | 2 |
| lineage6.1.3 | 2 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.8 | 5 |
| lineage4.1.4 | 1 |
| lineage3;lineage4 | 2 |
| lineage4.6.1.2 | 2 |
| lineage4.1.3 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage1.2.1.2 | 1 |
| lineage4 | 1 |
| lineage1.1.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 3 |
| lineage4.9;lineage7 | 3 |
| La1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage4.3.1.1 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1.2 | 2 |
| lineage4.1.1.1 | 2 |
| lineage1.1.1 | 1 |
| lineage4.8.2 | 1 |
| lineage4.4.2 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.5 | 1 |
| lineage4.2.2.1 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3.4.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 238 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR867541 | MDR-TB | lineage4.2.1 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR323037 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4769493 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR6046250 | Other | lineage4.9 | None | SRR5007168 | Other | lineage4.8.2;lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | ERR2886463 | Sensitive | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR18002999 | Pre-XDR-TB | lineage2.2.1 | None | DRR188816 | Sensitive | lineage4.2.2 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR18002908 | Other | lineage2.2.1 | None | ERR867573 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR1062918 | Other | lineage3 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769555 | Sensitive | La1.3 | None | ERR4819166 | Other | lineage3 | gb | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR4819175 | Other | lineage4.1.1.3 | gb | SRR1173770 | Other | lineage4.9 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR11342693 | MDR-TB | lineage4.8.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1175513 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR4816322 | Other | lineage4.9 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR11342662 | MDR-TB | lineage4.8.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1;lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR11342658 | RR-TB | lineage4.1.2 | None | SRR11342668 | Pre-XDR-TB | lineage4.8.1 | None | SRR1180345 | Other | lineage4.9 | None | ERR4816610 | Other | lineage4.3.3 | None | SRR18002941 | RR-TB | lineage2.2.1 | None | SRR1173687 | Pre-XDR-TB | lineage2.2.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR6045957 | Other | lineage4.9 | None | SRR7617847 | Other | La1.8.1 | None | ERR3806588 | Other | lineage6.1.3 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR867575 | Other | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | SRR6045267 | RR-TB | lineage4.8 | None | ERR867574 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR2446509 | Other | lineage3 | nl | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR14782054 | Other | lineage4.9 | None | ERR4828962 | Sensitive | lineage4.1.4 | it | SRR3675230 | Other | lineage3;lineage4 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR4816852 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR867572 | Other | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR1181349 | Sensitive | lineage4 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR4818831 | Other | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | SRR11342696 | MDR-TB | lineage4.4.1.1.1 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR1173740 | Other | lineage3;lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | SRR11342647 | MDR-TB | lineage4.1.1.3 | None | ERR4769452 | Other | lineage4.9 | None | ERR4769419 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR11342655 | MDR-TB | lineage2.2.1 | None | SRR11342664 | MDR-TB | lineage2.2.2 | None | ERR736831 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR1181368 | Other | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR6045832 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR18912069 | Other | lineage4.1.2.1 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR11342649 | MDR-TB | lineage4.3.3 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR4822138 | Other | lineage4.1.2.1 | None | SRR5007167 | RR-TB | lineage4.1.1.3.1 | None | SRR6045071 | Other | lineage4.3.1.1 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR6046117 | Other | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR4769408 | Other | La1.3 | None | ERR176741 | Other | lineage4.9 | None | SRR11342642 | MDR-TB | lineage4.1.1.1 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR13180363 | Sensitive | lineage4.1.2.1 | None | SRR21658550 | Other | lineage1.1.1 | None | SRR5007169 | RR-TB | lineage4.8.2 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR9786276 | Sensitive | lineage4.8 | None | SRR11342651 | MDR-TB | lineage4.1.1.1 | None | SRR5341330 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR4769457 | Other | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR11342653 | MDR-TB | lineage2.2.1 | None | ERR867523 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820030 | Other | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | DRR188519 | Other | lineage4.4.2 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR5007193 | RR-TB | lineage4.1.1.3.1 | None | SRR1180977 | Sensitive | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR4821616 | Other | lineage1.1.3.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | SRR11342644 | MDR-TB | lineage4.4.1.1.1 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR10796598 | Other | lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | SRR1735598 | RR-TB | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4818536 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR10796597 | Other | lineage4.3.3 | None | SRR6045217 | Sensitive | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR3275190 | Other | lineage3 | nl | ERR2513082 | Other | lineage4.1.2.1 | gb | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR28351557 | Other | lineage4.2.2.1 | None | ERR867527 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819357 | Sensitive | lineage4.9 | None | SRR7069347 | Other | lineage4.1.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR19303820 | RR-TB | lineage4.8 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR4818272 | Other | lineage4.3.2 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR16156775 | Other | lineage4.9 | None | ERR867567 | RR-TB | lineage3 | None | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR2446566 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR867554 | Other | lineage4.3.4.1 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4769450 | Other | lineage4.9 | None | ERR10796572 | Other | lineage4.3.4.1;lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR11342636 | MDR-TB | lineage4.3.3 | None | SRR20969542 | Other | lineage4.4.2 | None |
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